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Aliases for FLJ32255 Gene

Subcategory (RNA class) for FLJ32255 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for FLJ32255 Gene

  • Uncharacterized LOC643977 3

External Ids for FLJ32255 Gene

Previous GeneCards Identifiers for FLJ32255 Gene

  • GC05U900648
  • GC05M043018

Summaries for FLJ32255 Gene

GeneCards Summary for FLJ32255 Gene

FLJ32255 (Uncharacterized LOC643977) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FLJ32255 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ32255 Gene

Genomics for FLJ32255 Gene

GeneHancer (GH) Regulatory Elements for FLJ32255 Gene

Promoters and enhancers for FLJ32255 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I042987 Enhancer 1.5 Ensembl ENCODE dbSUPER 550.8 +1.3 1321 8.9 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 GC05M042992 PIR62953 PIR60474 FLJ32255 GC05P042997 GC05P042995 ZNF131 ENSG00000249492 TMEM267 AMD1P3
GH05I042984 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +7.7 7741 3 HDAC1 FOXA2 NFXL1 TCF12 EGR1 SMARCC2 FOS SMARCC1 ZC3H11A CEBPB ZNF131 RPL29P12 NIM1K LOC648987 LOC153684 FLJ32255 PIR60474 GC05M042992 PRELID3BP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FLJ32255 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FLJ32255 Gene

Genomic Locations for FLJ32255 Gene
chr5:42,985,398-42,993,333
(GRCh38/hg38)
Size:
7,936 bases
Orientation:
Minus strand
chr5:42,985,503-42,993,437
(GRCh37/hg19)

Genomic View for FLJ32255 Gene

Genes around FLJ32255 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ32255 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ32255 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ32255 Gene

Proteins for FLJ32255 Gene

Post-translational modifications for FLJ32255 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ32255 Gene

Domains & Families for FLJ32255 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ32255 Gene

Function for FLJ32255 Gene

Phenotypes for FLJ32255 Gene

GenomeRNAi human phenotypes for FLJ32255:
genes like me logo Genes that share phenotypes with FLJ32255: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ32255 Gene

Localization for FLJ32255 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ32255 Gene

Pathways & Interactions for FLJ32255 Gene

SuperPathways for FLJ32255 Gene

No Data Available

Interacting Proteins for FLJ32255 Gene

Gene Ontology (GO) - Biological Process for FLJ32255 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ32255 Gene

Drugs & Compounds for FLJ32255 Gene

No Compound Related Data Available

Transcripts for FLJ32255 Gene

mRNA/cDNA for FLJ32255 Gene

(4) Additional mRNA sequences :

Unigene Clusters for FLJ32255 Gene

Uncharacterized LOC643977:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ32255 Gene

No ASD Table

Relevant External Links for FLJ32255 Gene

GeneLoc Exon Structure for
FLJ32255

Expression for FLJ32255 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ32255 Gene

mRNA expression in normal human tissues for FLJ32255 Gene

SOURCE GeneReport for Unigene cluster for FLJ32255 Gene:

Hs.535791
genes like me logo Genes that share expression patterns with FLJ32255: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ32255 Gene

Orthologs for FLJ32255 Gene

No data available for Orthologs and Evolution for FLJ32255 Gene

Paralogs for FLJ32255 Gene

No data available for Paralogs for FLJ32255 Gene

Variants for FLJ32255 Gene

Sequence variations from dbSNP and Humsavar for FLJ32255 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000001295 -- 42,990,523(-) G/A intron_variant
rs1000350347 -- 42,993,677(-) G/A upstream_transcript_variant
rs1000405668 -- 42,993,433(-) G/A upstream_transcript_variant
rs1000476613 -- 42,991,181(-) G/A non_coding_transcript_variant
rs1000946410 -- 42,986,522(-) AT/ intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ32255 Gene

Variant ID Type Subtype PubMed ID
nsv1029288 CNV loss 25217958
nsv1161235 CNV deletion 26073780
nsv462126 CNV gain 19166990
nsv4815 CNV insertion 18451855
nsv597925 CNV gain 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for FLJ32255 Gene

Disorders for FLJ32255 Gene

Additional Disease Information for FLJ32255

No disorders were found for FLJ32255 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ32255 Gene

Publications for FLJ32255 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for FLJ32255 Gene

Sources for FLJ32255 Gene

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