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Aliases for FLJ26245 Gene

Subcategory (RNA class) for FLJ26245 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ26245 Gene

  • Uncharacterized LOC400533 3

External Ids for FLJ26245 Gene

ORGUL Members for FLJ26245 Gene

Previous GeneCards Identifiers for FLJ26245 Gene

  • GC16P034839
  • GC16P034836
  • GC16P034958
  • GC16U901077
  • GC16P031733
  • GC16P035047
  • GC16P035073
  • GC16P035101
  • GC16P035127
  • GC16P035158
  • GC16P035179
  • GC16P035197

Summaries for FLJ26245 Gene

GeneCards Summary for FLJ26245 Gene

FLJ26245 (Uncharacterized LOC400533) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ26245 Gene

Genomics for FLJ26245 Gene

Genomic Location for FLJ26245 Gene

Start:
35,743,268 bp from pter
End:
35,756,624 bp from pter
Size:
13,357 bases
Orientation:
Plus strand

Genomic View for FLJ26245 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ26245 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ26245 Gene

No data available for Regulatory Elements for FLJ26245 Gene

Proteins for FLJ26245 Gene

Post-translational modifications for FLJ26245 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ26245 Gene

Domains for FLJ26245 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ26245 Gene

Function for FLJ26245 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ26245 Gene

Localization for FLJ26245 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ26245 Gene

Pathways for FLJ26245 Gene

SuperPathways for FLJ26245 Gene

No Data Available

Interacting Proteins for FLJ26245 Gene

Gene Ontology (GO) - Biological Process for FLJ26245 Gene

None

No data available for Pathways by source for FLJ26245 Gene

Transcripts for FLJ26245 Gene

mRNA/cDNA for FLJ26245 Gene

(8) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ26245 Gene

Uncharacterized LOC400533:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ26245 Gene

No ASD Table

Relevant External Links for FLJ26245 Gene

GeneLoc Exon Structure for
FLJ26245

Expression for FLJ26245 Gene

mRNA expression in normal human tissues for FLJ26245 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ26245 Gene

This gene is overexpressed in Testis (39.5), Skin - Not Sun Exposed (Suprapubic) (8.0), and Skin - Sun Exposed (Lower leg) (5.5).

SOURCE GeneReport for Unigene cluster for FLJ26245 Gene Hs.499135

genes like me logo Genes that share expressions with FLJ26245: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for FLJ26245 Gene

Orthologs for FLJ26245 Gene

This gene was present in the common ancestor of chordates.

Orthologs for FLJ26245 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia 5S_rRNA 36
  • 57 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia n-R5s9 36
  • 50 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia 5S_rRNA 36
  • 41 (a)
ManyToMany
Species with no ortholog for FLJ26245:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ26245 Gene

ENSEMBL:
Gene Tree for FLJ26245 (if available)
TreeFam:
Gene Tree for FLJ26245 (if available)

Paralogs for FLJ26245 Gene

No data available for Paralogs for FLJ26245 Gene

Variants for FLJ26245 Gene

Sequence variations from dbSNP and Humsavar for FLJ26245 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs979576 -- 35,754,032(+) CTCCC(A/G)TTGCG intron-variant
rs979577 -- 35,754,052(+) CTTCC(C/T)GTGGG intron-variant
rs1039408 -- 35,748,987(+) TTCCC(C/T)GCCTG intron-variant
rs1532679 -- 35,755,003(+) tgggg(C/G)acaac intron-variant
rs2405199 -- 35,747,375(+) CGGAC(C/T)GCCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ26245 Gene

Variant ID Type Subtype PubMed ID
esv2751556 CNV Gain 17911159
dgv165n21 CNV Gain 19592680
dgv886e1 CNV Complex 17122850
dgv119e55 CNV Gain 17911159
nsv457486 CNV Gain 19166990
nsv9442 CNV Gain 18304495
nsv827640 CNV Gain 20364138
esv2672822 CNV Deletion 23128226

Relevant External Links for FLJ26245 Gene

HapMap Linkage Disequilibrium report
FLJ26245

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ26245 Gene

Disorders for FLJ26245 Gene

No disorders were found for FLJ26245 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for FLJ26245 Gene

Publications for FLJ26245 Gene

No publications were found for FLJ26245 Gene.

Products for FLJ26245 Gene

Sources for FLJ26245 Gene

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