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Aliases for FLJ25758 Gene

Subcategory (RNA class) for FLJ25758 Gene

lncRNA

Aliases for FLJ25758 Gene

  • Microtubule Affinity Regulating Kinase 1 Pseudogene 3
  • AC025278.2 5

External Ids for FLJ25758 Gene

ORGUL Members for FLJ25758 Gene

Previous GeneCards Identifiers for FLJ25758 Gene

  • GC19U900489
  • GC19M006955

Summaries for FLJ25758 Gene

GeneCards Summary for FLJ25758 Gene

FLJ25758 (Microtubule Affinity Regulating Kinase 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for FLJ25758 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ25758 Gene

Genomics for FLJ25758 Gene

Regulatory Elements for FLJ25758 Gene

Enhancers for FLJ25758 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H006270 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +731.1 731063 10.7 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 DUS3L ZNF557 KHSRP SNRPEP4 SAFB ENSG00000267571 VMAC ACSBG2 ALKBH7 GPR108
GH19H006587 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +418.6 418648 1.5 HDGF PKNOX1 ARNT YBX1 ZBTB40 ZNF366 SIRT6 ZNF143 ZNF207 ATF7 DENND1C LOC390877 FLJ25758 MBD3L5 MBD3L3 ACSBG2 ZNF557 ARHGEF18 DUS3L VMAC
GH19H006717 1.6 Ensembl ENCODE dbSUPER 14.6 +285.3 285257 6.4 HDGF PKNOX1 FOXA2 MLX ARID4B YBX1 DMAP1 ZNF2 YY1 SLC30A9 GPR108 ZNF557 FLJ25758 MBD3L5 MBD3L3 LOC390877 DUS3L ACSBG2 XAB2 TNFSF14
GH19H006515 1.6 Ensembl ENCODE dbSUPER 14.6 +489.8 489781 2 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZNF143 ZNF207 DEK SP3 ZC3H11A KHSRP SNRPEP4 DUS3L ENSG00000267571 ZNF557 VMAC LOC390877 FLJ25758 MBD3L5 MBD3L3
GH19H006765 1.5 Ensembl ENCODE dbSUPER 14.6 +239.1 239133 4.5 HDGF PKNOX1 ATF1 ARID4B SIN3A ETS1 ZNF121 GTF3C2 GLIS2 ZNF207 SH2D3A DUS3L XAB2 ZNF557 FLJ25758 MBD3L5 MBD3L3 LOC390877 RPL21P129 ACSBG2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLJ25758 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FLJ25758 Gene

Genomic Locations for FLJ25758 Gene
chr19:7,004,953-7,006,415
(GRCh38/hg38)
Size:
1,463 bases
Orientation:
Minus strand
chr19:7,004,964-7,006,426
(GRCh37/hg19)

Genomic View for FLJ25758 Gene

Genes around FLJ25758 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ25758 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ25758 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ25758 Gene

Proteins for FLJ25758 Gene

Post-translational modifications for FLJ25758 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ25758 Gene

Domains & Families for FLJ25758 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ25758 Gene

Function for FLJ25758 Gene

Phenotypes From GWAS Catalog for FLJ25758 Gene

Phenotypes for FLJ25758 Gene

GenomeRNAi human phenotypes for FLJ25758:
genes like me logo Genes that share phenotypes with FLJ25758: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ25758 Gene

Localization for FLJ25758 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FLJ25758 Gene

Pathways & Interactions for FLJ25758 Gene

SuperPathways for FLJ25758 Gene

No Data Available

Interacting Proteins for FLJ25758 Gene

Gene Ontology (GO) - Biological Process for FLJ25758 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ25758 Gene

Drugs & Compounds for FLJ25758 Gene

No Compound Related Data Available

Transcripts for FLJ25758 Gene

mRNA/cDNA for FLJ25758 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ25758 Gene

MAP/microtubule affinity-regulating kinase 1 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ25758 Gene

No ASD Table

Relevant External Links for FLJ25758 Gene

GeneLoc Exon Structure for
FLJ25758

Expression for FLJ25758 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ25758 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ25758 Gene

This gene is overexpressed in Testis (x52.8).

SOURCE GeneReport for Unigene cluster for FLJ25758 Gene:

Hs.367930
genes like me logo Genes that share expression patterns with FLJ25758: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ25758 Gene

Orthologs for FLJ25758 Gene

Evolution for FLJ25758 Gene

ENSEMBL:
Gene Tree for FLJ25758 (if available)
TreeFam:
Gene Tree for FLJ25758 (if available)

No data available for Orthologs for FLJ25758 Gene

Paralogs for FLJ25758 Gene

No data available for Paralogs for FLJ25758 Gene

Variants for FLJ25758 Gene

Sequence variations from dbSNP and Humsavar for FLJ25758 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000477063 -- 7,007,765(+) GAGGA(A/T)GACCC upstream-variant-2KB
rs1000577051 -- 7,007,071(+) GCCTT(A/G)GAGGT upstream-variant-2KB
rs1000786145 -- 7,006,144(+) GAGAA(C/T)ACTAC nc-transcript-variant
rs1001172464 -- 7,005,877(+) ATTAA(A/G)GGCCT nc-transcript-variant
rs1001883520 -- 7,006,095(+) TGCAG(C/G/T)GTGGT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ25758 Gene

Variant ID Type Subtype PubMed ID
nsv960776 CNV duplication 23825009
nsv578476 CNV loss 21841781
nsv517794 CNV gain+loss 19592680
nsv1061916 CNV gain 25217958
nsv1057286 CNV loss 25217958
nsv1056194 CNV gain 25217958
esv3643575 CNV gain 21293372
esv3643571 CNV gain 21293372
esv3583219 CNV loss 25503493
esv3574297 CNV gain 25503493
esv33729 CNV gain+loss 17666407
esv2762977 CNV gain+loss 21179565
esv2751811 CNV loss 17911159
esv2751810 CNV loss 17911159
esv2751809 CNV gain 17911159
dgv6239n54 CNV loss 21841781
dgv6237n54 CNV gain 21841781
dgv570n67 CNV loss 20364138
dgv393n27 CNV gain 19166990
dgv3422n100 CNV loss 25217958
dgv3421n100 CNV gain 25217958
dgv136e55 CNV gain 17911159

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FLJ25758 Gene

Disorders for FLJ25758 Gene

Relevant External Links for FLJ25758

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ25758

No disorders were found for FLJ25758 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ25758 Gene

Publications for FLJ25758 Gene

  1. Rapid identification of 14-3-3-binding proteins by protein microarray analysis. (PMID: 16260042) Satoh J … Yamamura T (Journal of neuroscience methods 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for FLJ25758 Gene

Sources for FLJ25758 Gene

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