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Aliases for FLJ25758 Gene

Subcategory (RNA class) for FLJ25758 Gene

lncRNA

Aliases for FLJ25758 Gene

  • MAP/Microtubule Affinity-Regulating Kinase 1 Pseudogene 3

External Ids for FLJ25758 Gene

ORGUL Members for FLJ25758 Gene

Previous GeneCards Identifiers for FLJ25758 Gene

  • GC19U900489
  • GC19M006955

Summaries for FLJ25758 Gene

GeneCards Summary for FLJ25758 Gene

FLJ25758 (MAP/Microtubule Affinity-Regulating Kinase 1 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ25758 Gene

Genomics for FLJ25758 Gene

Regulatory Elements for FLJ25758 Gene

Genomic Location for FLJ25758 Gene

Start:
7,004,953 bp from pter
End:
7,006,415 bp from pter
Size:
1,463 bases
Orientation:
Minus strand

Genomic View for FLJ25758 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ25758 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ25758 Gene

Proteins for FLJ25758 Gene

Post-translational modifications for FLJ25758 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ25758 Gene

Domains for FLJ25758 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ25758 Gene

Function for FLJ25758 Gene

Phenotypes for FLJ25758 Gene

GenomeRNAi human phenotypes for FLJ25758:
genes like me logo Genes that share phenotypes with FLJ25758: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ25758 Gene

Localization for FLJ25758 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ25758 Gene

Pathways for FLJ25758 Gene

SuperPathways for FLJ25758 Gene

No Data Available

Interacting Proteins for FLJ25758 Gene

Gene Ontology (GO) - Biological Process for FLJ25758 Gene

None

No data available for Pathways by source for FLJ25758 Gene

Transcripts for FLJ25758 Gene

mRNA/cDNA for FLJ25758 Gene

(5) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ25758 Gene

MAP/microtubule affinity-regulating kinase 1 pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ25758

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ25758 Gene

No ASD Table

Relevant External Links for FLJ25758 Gene

GeneLoc Exon Structure for
FLJ25758

Expression for FLJ25758 Gene

mRNA expression in normal human tissues for FLJ25758 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ25758 Gene

This gene is overexpressed in Testis (52.8).

SOURCE GeneReport for Unigene cluster for FLJ25758 Gene Hs.367930

genes like me logo Genes that share expressions with FLJ25758: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ25758 Gene

Orthologs for FLJ25758 Gene

Evolution for FLJ25758 Gene

ENSEMBL:
Gene Tree for FLJ25758 (if available)
TreeFam:
Gene Tree for FLJ25758 (if available)

No data available for Orthologs for FLJ25758 Gene

Paralogs for FLJ25758 Gene

No data available for Paralogs for FLJ25758 Gene

Variants for FLJ25758 Gene

Sequence variations from dbSNP and Humsavar for FLJ25758 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1908212 -- 7,006,933(+) AAAAA(A/C)CAAAA upstream-variant-2KB
rs2131746 -- 7,007,528(+) GCCCC(C/T)CTGCC upstream-variant-2KB
rs3050487 -- 7,007,961(-) GTGTG(-/TG)GTGGG upstream-variant-2KB
rs6510941 -- 7,005,894(+) TATGG(A/T)CCCTG nc-transcript-variant
rs7247145 -- 7,005,485(+) GTAGA(C/G)AGTGG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ25758 Gene

Variant ID Type Subtype PubMed ID
dgv136e55 CNV Gain 17911159
nsv517794 CNV Gain+Loss 19592680
dgv393n27 CNV Gain 19166990
esv2751809 CNV Gain 17911159
esv33729 CNV Gain+Loss 17666407
dgv3707n71 CNV Gain 21882294
dgv3708n71 CNV Gain 21882294
esv2751810 CNV Loss 17911159
esv2751811 CNV Loss 17911159
nsv910954 CNV Loss 21882294
dgv570n67 CNV Loss 20364138

Relevant External Links for FLJ25758 Gene

HapMap Linkage Disequilibrium report
FLJ25758

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ25758 Gene

Disorders for FLJ25758 Gene

No disorders were found for FLJ25758 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ25758 Gene

Publications for FLJ25758 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FLJ25758 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ25758
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ25758
    • Block miRNA regulation of FLJ25758 using miScript Target Protectors

    Sources for FLJ25758 Gene

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