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Aliases for FLJ22763 Gene

Subcategory (RNA class) for FLJ22763 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ22763 Gene

  • Uncharacterized LOC401081 3

External Ids for FLJ22763 Gene

Previous GeneCards Identifiers for FLJ22763 Gene

  • GC03P110320
  • GC03U901493
  • GC03P108856

Summaries for FLJ22763 Gene

GeneCards Summary for FLJ22763 Gene

FLJ22763 (Uncharacterized LOC401081) is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for FLJ22763 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for FLJ22763 Gene

Genomics for FLJ22763 Gene

Genomic Location for FLJ22763 Gene

Start:
109,136,714 bp from pter
End:
109,150,514 bp from pter
Size:
13,801 bases
Orientation:
Plus strand

Genomic View for FLJ22763 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ22763 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ22763 Gene

No data available for Regulatory Elements for FLJ22763 Gene

Proteins for FLJ22763 Gene

Post-translational modifications for FLJ22763 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ22763 Gene

Domains for FLJ22763 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ22763 Gene

Function for FLJ22763 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ22763 Gene

Localization for FLJ22763 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ22763 Gene

Pathways for FLJ22763 Gene

SuperPathways for FLJ22763 Gene

No Data Available

Interacting Proteins for FLJ22763 Gene

Gene Ontology (GO) - Biological Process for FLJ22763 Gene

None

No data available for Pathways by source for FLJ22763 Gene

Transcripts for FLJ22763 Gene

mRNA/cDNA for FLJ22763 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ22763 Gene

Uncharacterized LOC401081:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ22763

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ22763 Gene

No ASD Table

Relevant External Links for FLJ22763 Gene

GeneLoc Exon Structure for
FLJ22763

Expression for FLJ22763 Gene

mRNA expression in normal human tissues for FLJ22763 Gene

mRNA differential expression in normal tissues according to GTEx for FLJ22763 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (24.7), Liver (12.7), Colon - Transverse (9.8), and Kidney - Cortex (5.4).

SOURCE GeneReport for Unigene cluster for FLJ22763 Gene Hs.280892

genes like me logo Genes that share expressions with FLJ22763: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ22763 Gene

Orthologs for FLJ22763 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for FLJ22763 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm5485 16
Species with no ortholog for FLJ22763:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ22763 Gene

ENSEMBL:
Gene Tree for FLJ22763 (if available)
TreeFam:
Gene Tree for FLJ22763 (if available)

Paralogs for FLJ22763 Gene

No data available for Paralogs for FLJ22763 Gene

Variants for FLJ22763 Gene

Sequence variations from dbSNP and Humsavar for FLJ22763 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs938393 -- 109,147,125(-) TGAAG(A/G)AAAAA intron-variant
rs1356071 -- 109,136,927(+) ATCAT(A/G)TCTCC intron-variant
rs1356072 -- 109,136,954(+) ATAAT(A/T)CCTTT intron-variant
rs1399715 -- 109,139,643(+) AAAAA(C/T)AGATT intron-variant
rs1515374 -- 109,150,195(+) ACAAA(A/G)AAAAG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for FLJ22763 Gene

Variant ID Type Subtype PubMed ID
nsv522119 CNV Gain 19592680
nsv829664 CNV Gain 17160897
nsv877328 CNV Loss 21882294
nsv829665 CNV Gain 17160897

Relevant External Links for FLJ22763 Gene

HapMap Linkage Disequilibrium report
FLJ22763

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FLJ22763 Gene

Disorders for FLJ22763 Gene

No disorders were found for FLJ22763 Gene.

No data available for UniProtKB/Swiss-Prot for FLJ22763 Gene

Publications for FLJ22763 Gene

  1. Genome-wide contribution of genotype by environment interaction to variation of diabetes-related traits. (PMID: 24204828) Zheng J.S. … Lai C.Q. (PLoS ONE 2013) 3
  2. Genome-wide diet-gene interaction analyses for risk of colorectal cancer. (PMID: 24743840) Figueiredo J.C. … . (PLoS Genet. 2014) 3

Products for FLJ22763 Gene

Sources for FLJ22763 Gene

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