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Aliases for FLJ20712 Gene

Aliases for FLJ20712 Gene

  • Uncharacterized FLJ20712 3
  • RP11-89N17.1 5

External Ids for FLJ20712 Gene

Previous GeneCards Identifiers for FLJ20712 Gene

  • GC07P033408
  • GC07P033507
  • GC07U901520

Summaries for FLJ20712 Gene

GeneCards Summary for FLJ20712 Gene

FLJ20712 (Uncharacterized FLJ20712) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ20712 Gene

Genomics for FLJ20712 Gene

Regulatory Elements for FLJ20712 Gene

Enhancers for FLJ20712 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G033668 1.2 FANTOM5 ENCODE 10.7 -56.5 -56481 1.1 PKNOX1 FOXA2 ARNT FEZF1 ZNF2 ZNF121 GATA2 KLF7 FOS TSHZ1 FLJ20712 GC07M033642
GH07G033764 1.1 Ensembl ENCODE 11.2 +39.0 38990 1.8 PKNOX1 ARNT FEZF1 RFX5 GATA2 ZNF366 RCOR1 FOS ZNF174 USF2 ENSG00000227481 FLJ20712 BMPER GC07M033786
GH07G033805 1.1 Ensembl ENCODE 10.5 +81.6 81571 3.4 PKNOX1 BMI1 RAD21 GATA2 FOS DEK CEBPB KLF16 RFX3 CEBPA ENSG00000227481 FLJ20712 BMPER ENSG00000236494 ENSG00000233219
GH07G033697 0.8 ENCODE 12.1 -26.7 -26690 4.5 BMI1 FOS RELB IKZF2 CREM CEBPB TBX21 MAFF CEBPA IKZF1 FLJ20712 ENSG00000227481 ENSG00000236494 GC07M033642
GH07G033749 0.7 ENCODE 12.2 +24.2 24234 1.2 ZNF146 MTA2 JUNB BMI1 DPF2 TBX21 EP300 ATF2 GABPA JUND FLJ20712 BMPER ENSG00000227481 GC07M033786
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLJ20712 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ20712 Gene

Chromosome:
7
Start:
33,725,981 bp from pter
End:
33,728,456 bp from pter
Size:
2,476 bases
Orientation:
Plus strand

Genomic View for FLJ20712 Gene

Genes around FLJ20712 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ20712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ20712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ20712 Gene

Proteins for FLJ20712 Gene

Post-translational modifications for FLJ20712 Gene

No Post-translational modifications

Other Protein References for FLJ20712 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ20712 Gene

Domains & Families for FLJ20712 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ20712 Gene

Function for FLJ20712 Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ20712 Gene

Localization for FLJ20712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ20712 Gene

Pathways & Interactions for FLJ20712 Gene

SuperPathways for FLJ20712 Gene

No Data Available

Interacting Proteins for FLJ20712 Gene

Gene Ontology (GO) - Biological Process for FLJ20712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ20712 Gene

Drugs & Compounds for FLJ20712 Gene

No Compound Related Data Available

Transcripts for FLJ20712 Gene

mRNA/cDNA for FLJ20712 Gene

(3) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ20712 Gene

Uncharacterized FLJ20712:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ20712 Gene

No ASD Table

Relevant External Links for FLJ20712 Gene

GeneLoc Exon Structure for
FLJ20712

Expression for FLJ20712 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FLJ20712 Gene

SOURCE GeneReport for Unigene cluster for FLJ20712 Gene:

Hs.272195
genes like me logo Genes that share expression patterns with FLJ20712: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FLJ20712 Gene

Orthologs for FLJ20712 Gene

Evolution for FLJ20712 Gene

ENSEMBL:
Gene Tree for FLJ20712 (if available)
TreeFam:
Gene Tree for FLJ20712 (if available)

No data available for Orthologs for FLJ20712 Gene

Paralogs for FLJ20712 Gene

No data available for Paralogs for FLJ20712 Gene

Variants for FLJ20712 Gene

Sequence variations from dbSNP and Humsavar for FLJ20712 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000488043 -- 33,729,646(+) TGGTG(A/G)GGAGG downstream-variant-500B
rs1000823456 -- 33,728,096(+) TAGAT(A/C)TGCGT reference, missense
rs1001437979 -- 33,728,794(+) ACCCA(C/T)AGTTT utr-variant-3-prime
rs1002179096 -- 33,727,885(+) CTCCT(C/G)ACCCT reference, missense
rs1002439359 -- 33,727,641(+) GACCC(C/G)CCGAA reference, synonymous-codon

Variation tolerance for FLJ20712 Gene

Gene Damage Index Score: 1.80; 33.95% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for FLJ20712 Gene

Disorders for FLJ20712 Gene

Relevant External Links for FLJ20712

Genetic Association Database (GAD)
FLJ20712
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ20712

No disorders were found for FLJ20712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ20712 Gene

Publications for FLJ20712 Gene

  1. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64
  2. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C. … Larson M.G. (BMC Med. Genet. 2007) 46 64
  3. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. (PMID: 15782160) Kim J. … Iyer V.R. (Nat. Methods 2005) 3 64
  4. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PMID: 8125298) Maruyama K. … Sugano S. (Gene 1994) 3 64

Products for FLJ20712 Gene

Sources for FLJ20712 Gene

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