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Aliases for FLJ20712 Gene

Aliases for FLJ20712 Gene

  • Uncharacterized FLJ20712 3
  • RP11-89N17.1 5

External Ids for FLJ20712 Gene

Previous GeneCards Identifiers for FLJ20712 Gene

  • GC07P033408
  • GC07P033507
  • GC07U901520

Summaries for FLJ20712 Gene

GeneCards Summary for FLJ20712 Gene

FLJ20712 (Uncharacterized FLJ20712) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ20712 Gene

Genomics for FLJ20712 Gene

Regulatory Elements for FLJ20712 Gene

Enhancers for FLJ20712 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F033749 0.2 ENCODE 12.2 +24.2 24234 1.2 ZNF146 MTA2 JUNB BMI1 TBX21 EP300 ATF2 GABPA JUND CBX5 FLJ20712 BMPER ENSG00000227481 GC07M033786
GH07F033697 0.5 ENCODE 12.1 -26.7 -26690 4.5 SOX13 TFAP4 SAP130 ZNF384 BMI1 CEBPG ZNF644 TEAD3 ZNF316 NR2F6 FLJ20712 ENSG00000227481 ENSG00000236494 GC07M033642
GH07F033755 0.2 ENCODE 11.6 +29.3 29283 0.2 PKNOX1 ZBTB8A FEZF1 ZEB2 ZNF843 ATF2 NR2F2 OSR2 CTBP1 GLIS1 ENSG00000227481 FLJ20712 BMPER GC07M033786
GH07F033757 0.2 ENCODE 11.5 +31.3 31293 0.1 PKNOX1 FLJ20712 ENSG00000227481 BMPER GC07M033786
GH07F033764 0.8 Ensembl ENCODE 11.2 +39.0 38990 1.8 SOX13 GTF2F1 PKNOX1 MXI1 MAX ZNF384 FEZF1 RFX5 HIC1 CTBP1 ENSG00000227481 FLJ20712 BMPER GC07M033786
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FLJ20712 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLJ20712 Gene

Chromosome:
7
Start:
33,725,981 bp from pter
End:
33,728,456 bp from pter
Size:
2,476 bases
Orientation:
Plus strand

Genomic View for FLJ20712 Gene

Genes around FLJ20712 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLJ20712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLJ20712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ20712 Gene

Proteins for FLJ20712 Gene

Post-translational modifications for FLJ20712 Gene

No Post-translational modifications

Other Protein References for FLJ20712 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for FLJ20712 Gene

Domains & Families for FLJ20712 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ20712 Gene

Function for FLJ20712 Gene

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ20712 Gene

Localization for FLJ20712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ20712 Gene

Pathways & Interactions for FLJ20712 Gene

SuperPathways for FLJ20712 Gene

No Data Available

Interacting Proteins for FLJ20712 Gene

Gene Ontology (GO) - Biological Process for FLJ20712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FLJ20712 Gene

Transcripts for FLJ20712 Gene

mRNA/cDNA for FLJ20712 Gene

(3) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ20712 Gene

Uncharacterized FLJ20712:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ20712 Gene

No ASD Table

Relevant External Links for FLJ20712 Gene

GeneLoc Exon Structure for
FLJ20712

Expression for FLJ20712 Gene

mRNA expression in normal human tissues for FLJ20712 Gene

SOURCE GeneReport for Unigene cluster for FLJ20712 Gene:

Hs.272195
genes like me logo Genes that share expression patterns with FLJ20712: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLJ20712 Gene

Orthologs for FLJ20712 Gene

Evolution for FLJ20712 Gene

ENSEMBL:
Gene Tree for FLJ20712 (if available)
TreeFam:
Gene Tree for FLJ20712 (if available)

No data available for Orthologs for FLJ20712 Gene

Paralogs for FLJ20712 Gene

No data available for Paralogs for FLJ20712 Gene

Variants for FLJ20712 Gene

Sequence variations from dbSNP and Humsavar for FLJ20712 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10245009 -- 33,726,337(+) aaaat(A/T)caaaa upstream-variant-2KB
rs112539977 -- 33,725,876(+) TGACA(A/C)CACCC upstream-variant-2KB
rs113283275 -- 33,729,465(+) TGGAG(C/T)GGCCG downstream-variant-500B
rs11335032 -- 33,728,512(+) ATTAC(-/T)TTTTT utr-variant-3-prime
rs114177641 -- 33,728,146(+) TCAAC(C/T)GGAAG reference, missense

Variation tolerance for FLJ20712 Gene

Gene Damage Index Score: 1.80; 33.95% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for FLJ20712 Gene

Disorders for FLJ20712 Gene

Relevant External Links for FLJ20712

Genetic Association Database (GAD)
FLJ20712
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FLJ20712

No disorders were found for FLJ20712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ20712 Gene

Publications for FLJ20712 Gene

  1. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3 64
  2. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C. … Larson M.G. (BMC Med. Genet. 2007) 46 64
  3. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. (PMID: 15782160) Kim J. … Iyer V.R. (Nat. Methods 2005) 3 64
  4. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PMID: 8125298) Maruyama K. … Sugano S. (Gene 1994) 3 64

Products for FLJ20712 Gene

Sources for FLJ20712 Gene

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