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Aliases for FLJ16779 Gene

Subcategory (RNA class) for FLJ16779 Gene


Quality Score for this RNA gene is


Aliases for FLJ16779 Gene

  • Uncharacterized LOC100192386 3

External Ids for FLJ16779 Gene

ORGUL Members for FLJ16779 Gene

Previous GeneCards Identifiers for FLJ16779 Gene

  • GC20U900409
  • GC20P061885

Summaries for FLJ16779 Gene

GeneCards Summary for FLJ16779 Gene

FLJ16779 (Uncharacterized LOC100192386) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ16779 Gene

Genomics for FLJ16779 Gene

Regulatory Elements for FLJ16779 Gene

Genomic Location for FLJ16779 Gene

63,253,978 bp from pter
63,261,615 bp from pter
7,638 bases
Plus strand

Genomic View for FLJ16779 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ16779 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ16779 Gene

Proteins for FLJ16779 Gene

Post-translational modifications for FLJ16779 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ16779 Gene

Domains & Families for FLJ16779 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ16779 Gene

Function for FLJ16779 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLJ16779 Gene

Localization for FLJ16779 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ16779 Gene

Pathways & Interactions for FLJ16779 Gene

SuperPathways for FLJ16779 Gene

No Data Available

Interacting Proteins for FLJ16779 Gene

Gene Ontology (GO) - Biological Process for FLJ16779 Gene


No data available for Pathways by source and SIGNOR curated interactions for FLJ16779 Gene

Drugs & Compounds for FLJ16779 Gene

No Compound Related Data Available

Transcripts for FLJ16779 Gene

mRNA/cDNA for FLJ16779 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ16779 Gene

Uncharacterized LOC100192386:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ16779 Gene

No ASD Table

Relevant External Links for FLJ16779 Gene

GeneLoc Exon Structure for

Expression for FLJ16779 Gene

mRNA expression in normal human tissues for FLJ16779 Gene

mRNA expression in normal human tissues for FLJ16779 Gene

SOURCE GeneReport for Unigene cluster for FLJ16779 Gene Hs.111539

genes like me logo Genes that share expression patterns with FLJ16779: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FLJ16779 Gene

Orthologs for FLJ16779 Gene

Evolution for FLJ16779 Gene

Gene Tree for FLJ16779 (if available)
Gene Tree for FLJ16779 (if available)

No data available for Orthologs for FLJ16779 Gene

Paralogs for FLJ16779 Gene

No data available for Paralogs for FLJ16779 Gene

Variants for FLJ16779 Gene

Sequence variations from dbSNP and Humsavar for FLJ16779 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs3589 -- 63,261,544(+) AAGGC(C/T)GAGGC nc-transcript-variant
rs910892 -- 63,256,543(-) AGACC(A/G)AACCC nc-transcript-variant
rs1884819 -- 63,261,273(+) CCCCC(C/T)GGCAC nc-transcript-variant
rs2281565 -- 63,261,146(+) CAGAC(C/T)AGCGC nc-transcript-variant
rs2281566 -- 63,261,160(+) CTAGA(A/C)CCAGC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FLJ16779 Gene

Variant ID Type Subtype PubMed ID
nsv913073 CNV Loss 21882294
nsv9825 CNV Gain 18304495
dgv4618n71 CNV Loss 21882294
nsv913161 CNV Loss 21882294
nsv913165 CNV Loss 21882294
nsv913166 CNV Loss 21882294
dgv4626n71 CNV Loss 21882294
dgv4627n71 CNV Loss 21882294
dgv4628n71 CNV Loss 21882294
dgv4629n71 CNV Loss 21882294
nsv834032 CNV Loss 17160897
dgv520n27 CNV Loss 19166990
nsv518905 CNV Loss 19592680
nsv470560 CNV Loss 18288195
nsv525279 CNV Loss 19592680
nsv913177 CNV Loss 21882294
dgv4630n71 CNV Loss 21882294
nsv3446 CNV Loss 18451855
nsv522880 CNV Loss 19592680
nsv913181 CNV Loss 21882294
dgv4631n71 CNV Loss 21882294
esv32831 CNV Loss 17666407
esv2722899 CNV Deletion 23290073

Relevant External Links for FLJ16779 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FLJ16779 Gene

Disorders for FLJ16779 Gene

Relevant External Links for FLJ16779

Genetic Association Database (GAD)
genes like me logo Genes that share disorders with FLJ16779: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLJ16779 Gene

Publications for FLJ16779 Gene

  1. Genetic determinants of cardiovascular events among women with migraine: a genome-wide association study. (PMID: 21779381) SchA1rks M. … Kurth T. (PLoS ONE 2011) 67

Products for FLJ16779 Gene

Sources for FLJ16779 Gene

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