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Aliases for FLJ13224 Gene

Subcategory (RNA class) for FLJ13224 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FLJ13224 Gene

  • Uncharacterized LOC79857 3

External Ids for FLJ13224 Gene

Summaries for FLJ13224 Gene

GeneCards Summary for FLJ13224 Gene

FLJ13224 (Uncharacterized LOC79857) is an RNA Gene, and belongs to the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLJ13224 Gene

Genomics for FLJ13224 Gene

Genomic Location for FLJ13224 Gene

Start:
31,324,316 bp from pter
End:
31,325,945 bp from pter
Size:
1,630 bases
Orientation:
Plus strand

Genomic View for FLJ13224 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FLJ13224 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLJ13224 Gene

Regulatory Elements for FLJ13224 Gene

Proteins for FLJ13224 Gene

Post-translational modifications for FLJ13224 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLJ13224 Gene

Domains for FLJ13224 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLJ13224 Gene

Function for FLJ13224 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FLJ13224 Gene

Localization for FLJ13224 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLJ13224 Gene

Pathways for FLJ13224 Gene

SuperPathways for FLJ13224 Gene

No Data Available

Interacting Proteins for FLJ13224 Gene

Gene Ontology (GO) - Biological Process for FLJ13224 Gene

None

No data available for Pathways by source for FLJ13224 Gene

Transcripts for FLJ13224 Gene

mRNA/cDNA for FLJ13224 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLJ13224 Gene

Uncharacterized LOC79857:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLJ13224 Gene

No ASD Table

Relevant External Links for FLJ13224 Gene

GeneLoc Exon Structure for
FLJ13224

Expression for FLJ13224 Gene

mRNA expression in normal human tissues for FLJ13224 Gene

SOURCE GeneReport for Unigene cluster for FLJ13224 Gene Hs.534485

genes like me logo Genes that share expressions with FLJ13224: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FLJ13224 Gene

Orthologs for FLJ13224 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for FLJ13224 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia 3010003L21Rik 16
Species with no ortholog for FLJ13224:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FLJ13224 Gene

ENSEMBL:
Gene Tree for FLJ13224 (if available)
TreeFam:
Gene Tree for FLJ13224 (if available)

Paralogs for FLJ13224 Gene

No data available for Paralogs for FLJ13224 Gene

Variants for FLJ13224 Gene

Structural Variations from Database of Genomic Variants (DGV) for FLJ13224 Gene

Variant ID Type Subtype PubMed ID
dgv489e1 CNV Complex 17122850
nsv428276 CNV Gain 18775914
esv2751043 CNV Gain 17911159
esv2751046 CNV Gain 17911159
dgv63e55 CNV Gain 17911159
dgv493e1 CNV Complex 17122850
nsv832364 CNV Loss 17160897
nsv661 CNV Insertion 18451855

Relevant External Links for FLJ13224 Gene

HapMap Linkage Disequilibrium report
FLJ13224

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for FLJ13224 Gene

Disorders for FLJ13224 Gene

Relevant External Links for FLJ13224

Genetic Association Database (GAD)
FLJ13224
genes like me logo Genes that share disorders with FLJ13224: view

No data available for UniProtKB/Swiss-Prot for FLJ13224 Gene

Publications for FLJ13224 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FLJ13224 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FLJ13224
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FLJ13224
    • Block miRNA regulation of FLJ13224 using miScript Target Protectors

    Sources for FLJ13224 Gene

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