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Aliases & Descriptions for FLI1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EWSR2 1, 2 | | SIC-1 1, 2 |
| | | Descriptions |
|---|
| ERGB transcription factor 3 | | Fli-1 proto-oncogene 3 | | Friend leukemia virus integration 1 2 |
|
| | Search outside databases for aliases for FLI1 genePrevious GC identifers: GC11P130564 GC11P130076 GC11P128596 GC11P128101 |
Summaries for FLI1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: FLI1_HUMAN, Q01543Function: Sequence-specific transcriptional activator. Recognizes the DNA sequence 5'-C[CA]GGAAGT-3'Gene Wiki entry for FLI1 |
Genomic Location for FLI1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the FLI1 gene 
Entrez Gene cytogenetic band: 11q24.1-q24.3 Ensembl cytogenetic band: 11q24.3 HGNC cytogenetic band: 11q24.1-q24.3FLI1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P128069:
(about GC identifiers)
Start:
|
128,069,199 bp from pter |
End:
|
128,187,521 bp from pter |
Size:
|
118,323 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000011.8 NT_033899.7
| Proteins for FLI1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: FLI1_HUMAN, Q01543 (See
protein sequence)Recommended Name: Friend leukemia integration 1 transcription factor Size: 452 amino acids; 50982 Da
Subunit: Can form homodimers or heterodimers with ETV6/TEL1
Subcellular location: Nucleus
Miscellaneous: Located on a fragment of chromosome 11 flanked on the centromeric side by the acute lymphoblastic leukemia-associated t(4;11)(q21;q23) translocation breakpoint and on the telomeric side by the Ewing- and neuroepithelioma-associated t(11;22) (q24;q12) breakpoint
PDB structures from and Proteopedia :1FLI (3D)
 1X66 (3D)
 2YTU (3D)
 
Secondary accessions: Q14319 Q92480 Q9UE07Alternative splicing: 2 isoforms: Q01543-1 Q01543-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002008.2
ENSEMBL proteins: ENSP00000339627 ENSP00000281428
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: FLI1 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005634 | nucleus |
IEA | -- | About this table
Antibodies for FLI1: Assays for FLI1: | Protein
Domains/ Families for FLI1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q01543
ProtoNet protein and cluster: Q01543 1 Blocks protein family: IPB003118 Sterile alpha motif (SAM)/Pointed domain
UniProtKB/Swiss-Prot: FLI1_HUMAN, Q01543Similarity: Belongs to the ETS familySimilarity: Contains 1 ETS DNA-binding domainSimilarity: Contains 1 PNT (pointed) domain | Gene Function for FLI1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002017
Applied Biosystems Silencer® siRNAs for FLI1
Sigma-Aldrich siRNA for FLI1  Sigma-Aldrich shRNA Panels and shRNA for FLI1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002017                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002017                                  untagged cDNA clone in CMV expression vector: NM_002017 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002017
UniProtKB/Swiss-Prot: FLI1_HUMAN, Q01543Function: Sequence-specific transcriptional activator. Recognizes the DNA sequence 5'-C[CA]GGAAGT-3'Genatlas biochemistry entry for FLI1:Friend and Cas-Br-E murine leukemia virus integration site9 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Fli1):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for FLI1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for FLI1 
5/17 Interacting proteins for FLI1 (Q015431, 2 ENSP000003396273) via UniProtKB, MINT, and/or STRING (see all 17
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for FLI1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for FLI1 1 Novoseek chemical compound relationship for FLI1 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| oligonucleotide |
0.00 |
1 |
8238248 (1) |
About this table
|
Transcripts for FLI1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002017
Sigma-Aldrich siRNA for FLI1  Sigma-Aldrich shRNA Panels and shRNA for FLI1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002017 REFSEQ mRNAs for FLI1 gene: NM_002017.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002017               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002017                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002017                                  untagged cDNA clone in CMV expression vector: NM_002017  Additional cDNA sequence: AK294279.1 AK300153.1 AK313370.1 AY029368.1 BC001670.1 BC010115.1 CR600005.1 M93255.1 M98833.3 S45205.1 S64709.1 S72620.1 X67001.1 6 DOTS entries: DT.315565 DT.91981587 DT.207655 DT.91669639 DT.100665472 DT.99933688 24/132 AceView cDNA sequences (see all 132
):AW340324 AA256529 BF899604 AA863340 BQ215477 BC001670 BC010115 AU118654 BQ642921 AI457281 AI354789 CR600005 BG257780 BQ953977 BF224181 AI468916 BX281437 AA862270 AI216469 BQ232274 BX328036 AA805688 AA664465 AW965804
highest scoring ESTs for FLI1:AA210631 AA234465 AA312319 AA805688 AA862270 AA917046 AI128180 AI273710 AI372049 AI376527 Unigene Cluster for FLI1: Friend leukemia virus integration 1 Hs.504281 [show with all ESTs]Unigene Representative Sequence: NM_002017
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for FLI1
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | · | 11c | |
| SP1: | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | |   | - |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | - |   | |   | |   | - |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for FLI1
2 Ensembl transcripts including schematic representations: ENST00000344954
ENST00000281428
|
Expression for FLI1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| FLI1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for FLI1
1 / 2 / 3 9 probe-sets matching FLI1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTGTAAAATA
SOURCE GeneReport for Unigene cluster: Hs.504281
Expression variation in blood from EXPOLDB for FLI1 |
Orthologs for FLI1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for FLI1 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for FLI1
ENSEMBL Gene Tree for FLI1 | Paralogs for FLI1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for FLI1 gene
- FEV2 ERG2 ETV22
|
SNPs/Variants for FLI1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for FLI1 (up to first 250kb)
|
Disorders & Mutations for FLI1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 193067
UniProtKB/Swiss-Prot: FLI1_HUMAN, Q01543
A chromosomal aberration involving FLI1 is a cause of Ewing sarcoma [MIM:133450]. Translocation t(11;22)(q24;q12) with EWS10/32 Novoseek disease relationships for FLI1 gene (see all 32
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| ewings sarcoma |
93.47 |
74 |
12522555 (4), 16837212 (3), 8039423 (3), 16865286 (2) (see all 55) |
| friend leukemia |
82.15 |
4 |
15557108 (1), 18785112 (1), 1406633 (1), 8039423 (1) |
| peripheral neuroepithelioma |
75.77 |
1 |
8039423 (1) |
| erythroleukemia |
70.70 |
22 |
2044959 (4), 8502483 (4), 8336942 (2), 14570912 (1) (see all 13) |
| vascular neoplasms |
65.20 |
6 |
15001993 (3), 11474291 (2) |
| neuroectodermal tumors |
59.33 |
1 |
16046110 (1) |
| sarcoma synovial |
57.70 |
1 |
11117787 (1) |
| rhabdomyosarcoma |
51.81 |
2 |
11117787 (1), 16917000 (1) |
| leukemia |
49.49 |
19 |
9178886 (2), 2044959 (2), 10772879 (2), 8336942 (2) (see all 14) |
| sarcoma |
48.95 |
2 |
11474291 (1), 8336942 (1) |
About this table
1 PharmGKB disease relationship for FLI1 geneAbout this table
Genetic Association Database: FLI1 Human Genome Epidemiology Navigator: FLI1 (1 document) Tumor Gene Database: FLI1
|
Medical News for FLI1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for FLI1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/200 PubMed articles for FLI1 gene (see all 200
):- The human homolog of the mouse common viral integration region, FLI1, maps to 11q23-q24. (PubMed id 1765382)2, 3, 4 Baud V.... Bergeron D. (1991)
- Solution structure of the ets domain of Fli-1 when bound to DNA. (PubMed id 7773776)1, 3, 4 Liang H.... Fesik S.W. (1994)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Chromosome translocation based on illegitimate recombination in human tumors. (PubMed id 9751743)3, 4 Zucman-Rossi J.... Thomas G. (1998)
- Molecular analysis of a t(11;22) translocation junction in a case of Ewing's sarcoma. (PubMed id 7542907)3, 4 Bhagirath T.... Yoshida M.C. (1995)
- Human FLI-1 localizes to chromosome 11q24 and has an aberrant transcript in neuroepithelioma. (PubMed id 8439553)3, 4 Hromas R....Klemsz M.J. (1993)
- Structure and expression of human Fli-1 gene. (PubMed id 1394211)3, 4 Prasad D.D.... Reddy E.S. (1992)
- The ERGB/Fli-1 gene: isolation and characterization of a new member of the family of human ETS transcription factors. (PubMed id 1445800)3, 4 Watson D.K.... Seth A. (1992)
- Gene fusion with an ETS DNA-binding domain caused by chromosome translocation in human tumours. (PubMed id 1522903)3, 4 Delattre O.... Thomas G. (1992)
- FLI1 monoallelic expression combined with its hemizygous loss underlies Paris-Trousseau/Jacobsen thrombopenia. (PubMed id 15232614)1, 3 Raslova H....Favier R. (2004)
|
Search for FLI1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing FLI1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing FLI1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing FLI1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for FLI1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for FLI1:

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