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Aliases for FLG-AS1 Gene

Subcategory (RNA class) for FLG-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FLG-AS1 Gene

  • FLG Antisense RNA 1 2 3 5
  • FLG Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FLG-AS1 Gene

Previous GeneCards Identifiers for FLG-AS1 Gene

  • GC01P152168

Summaries for FLG-AS1 Gene

GeneCards Summary for FLG-AS1 Gene

FLG-AS1 (FLG Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FLG-AS1 Gene

Genomics for FLG-AS1 Gene

Regulatory Elements for FLG-AS1 Gene

Enhancers for FLG-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F152045 1.5 FANTOM5 ENCODE 16 -119.5 -119521 6.6 HDGF PKNOX1 CREB3L1 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 ZNF143 MRPL9 FLG-AS1 VPS72 RPS10P6 SCNM1 LYSMD1 GABPB2 ENSG00000229021 RN7SL444P S100A11
GH01F152188 0.8 ENCODE 29.2 +20.9 20939 1.3 CTCF SIN3A RAD21 ZNF664 GATA3 ZBTB48 POLR2A PATZ1 SCRT2 ZNF143 FLG-AS1 HRNR FLG PIR41917
GH01F152186 0.6 ENCODE 33.4 +18.9 18900 0.9 JUN STAT3 RCOR1 MAFK EP300 FLG-AS1 PIP5K1A PIR41917
GH01F152189 0.8 ENCODE 13.5 +22.1 22105 0.7 CTCF ESRRA PKNOX1 TAL1 MAX SIN3A RAD21 ZNF664 CTBP1 GATA3 FLG-AS1 PIR41917
GH01F152166 1.1 Ensembl ENCODE 9.1 +0.0 22 2.5 TBP ZEB1 RFX5 RCOR1 FOS CEBPB NR2F2 MAFF STAT3 MYC FLG-AS1 ENSG00000229021 TCHH PIR41917
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FLG-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FLG-AS1 Gene

152,168,125 bp from pter
152,445,456 bp from pter
277,332 bases
Plus strand

Genomic View for FLG-AS1 Gene

Genes around FLG-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FLG-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FLG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FLG-AS1 Gene

Proteins for FLG-AS1 Gene

Post-translational modifications for FLG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FLG-AS1 Gene

Domains & Families for FLG-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FLG-AS1 Gene

Function for FLG-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FLG-AS1 Gene

Localization for FLG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FLG-AS1 Gene

Pathways & Interactions for FLG-AS1 Gene

SuperPathways for FLG-AS1 Gene

No Data Available

Interacting Proteins for FLG-AS1 Gene

Gene Ontology (GO) - Biological Process for FLG-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FLG-AS1 Gene

Transcripts for FLG-AS1 Gene

mRNA/cDNA for FLG-AS1 Gene

(5) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FLG-AS1 Gene

FLG antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FLG-AS1 Gene

No ASD Table

Relevant External Links for FLG-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FLG-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FLG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FLG-AS1 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.4).

SOURCE GeneReport for Unigene cluster for FLG-AS1 Gene:

genes like me logo Genes that share expression patterns with FLG-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FLG-AS1 Gene

Orthologs for FLG-AS1 Gene

Evolution for FLG-AS1 Gene

Gene Tree for FLG-AS1 (if available)
Gene Tree for FLG-AS1 (if available)

No data available for Orthologs for FLG-AS1 Gene

Paralogs for FLG-AS1 Gene

No data available for Paralogs for FLG-AS1 Gene

Variants for FLG-AS1 Gene

Sequence variations from dbSNP and Humsavar for FLG-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs115746363 Pathogenic 152,312,410(+) GTCTC(A/G)TGCCT upstream-variant-2KB, reference, stop-gained
rs558269137 Pathogenic 152,312,601(+) CTGAC(-/ACTG)ACTGT upstream-variant-2KB, reference, frameshift-variant
rs61816761 Pathogenic 152,313,385(+) GTCTC(A/G)TGCCT upstream-variant-2KB, reference, stop-gained
rs797045090 Pathogenic 152,312,743(-) AGCTC(C/T)AGTCA upstream-variant-2KB, reference, stop-gained
rs144419479 Likely pathogenic 152,311,957(+) TGACT(A/C/G)CTCCT upstream-variant-2KB, reference, missense, stop-gained

Structural Variations from Database of Genomic Variants (DGV) for FLG-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv200n106 CNV duplication 24896259
esv2043587 CNV deletion 18987734
esv25681 CNV loss 19812545
esv2593579 CNV deletion 19546169
esv2663079 CNV deletion 23128226
esv2664011 CNV deletion 23128226
esv2718140 CNV deletion 23290073
esv2718151 CNV deletion 23290073
esv3540790 CNV deletion 23714750
esv3578178 CNV loss 25503493
esv3587546 CNV gain 21293372
esv3587547 CNV loss 21293372
nsv1014095 CNV gain 25217958
nsv1075398 CNV duplication 25765185
nsv1147169 CNV duplication 26484159
nsv471348 CNV gain 19718026
nsv952208 CNV deletion 24416366
nsv998298 CNV loss 25217958

Relevant External Links for FLG-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FLG-AS1 Gene

Disorders for FLG-AS1 Gene

Relevant External Links for FLG-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FLG-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FLG-AS1 Gene

Publications for FLG-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. Genetic variants associated with disordered eating. (PMID: 23568457) Wade T.D. … Martin N.G. (Int J Eat Disord 2013) 3 64
  3. Genome-wide association study identifies two new susceptibility loci for atopic dermatitis in the Chinese Han population. (PMID: 21666691) Sun L.D. … Zhang X.J. (Nat. Genet. 2011) 3 64
  4. A genome-wide association study of Cloninger's temperament scales: implications for the evolutionary genetics of personality. (PMID: 20691247) Verweij K.J. … Wray N.R. (Biol Psychol 2010) 3 64
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FLG-AS1 Gene

Sources for FLG-AS1 Gene

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