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Aliases for FKSG29 Gene

Subcategory (RNA class) for FKSG29 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for FKSG29 Gene

  • FKSG29 3

External Ids for FKSG29 Gene

ORGUL Members for FKSG29 Gene

Previous GeneCards Identifiers for FKSG29 Gene

  • GC13U900547
  • GC13P098802
  • GC13P100003
  • GC13P080597

Summaries for FKSG29 Gene

GeneCards Summary for FKSG29 Gene

FKSG29 (FKSG29) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for FKSG29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FKSG29 Gene

Genomics for FKSG29 Gene

Regulatory Elements for FKSG29 Gene

Enhancers for FKSG29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H099347 0.9 ENCODE dbSUPER 0.7 -3.3 -3315 1 CBFB JUNB EBF1 BATF POLR2A BCL11A EED RUNX3 CREM GPR183 UBAC2 GPR18 FKSG29 GC13M099346
GH13H099350 0.8 ENCODE dbSUPER 0.7 +0.7 746 2 PKNOX1 CBFB EED MLLT1 ETV6 RUNX3 PRDM1 GPR183 UBAC2 FKSG29 GC13P099357
GH13H099351 0.2 dbSUPER 0.7 -0.9 -882 0 GPR183 UBAC2 GPR18 FKSG29 GC13M099346
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FKSG29 on UCSC Golden Path with GeneCards custom track

Genomic Location for FKSG29 Gene

Chromosome:
13
Start:
99,351,420 bp from pter
End:
99,352,027 bp from pter
Size:
608 bases
Orientation:
Plus strand

Genomic View for FKSG29 Gene

Genes around FKSG29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FKSG29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FKSG29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FKSG29 Gene

Proteins for FKSG29 Gene

  • Protein details for FKSG29 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q9BYX6
    Recommended name:
    FKSG29
    Protein Accession:
    Q9BYX6

    Protein attributes for FKSG29 Gene

    Size:
    130 amino acids
    Molecular mass:
    14645 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FKSG29 Gene

Post-translational modifications for FKSG29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FKSG29 Gene

Domains & Families for FKSG29 Gene

Protein Domains for FKSG29 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FKSG29 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FKSG29: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FKSG29 Gene

Function for FKSG29 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FKSG29 Gene

Localization for FKSG29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FKSG29 Gene

Pathways & Interactions for FKSG29 Gene

SuperPathways for FKSG29 Gene

No Data Available

Interacting Proteins for FKSG29 Gene

Gene Ontology (GO) - Biological Process for FKSG29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FKSG29 Gene

Drugs & Compounds for FKSG29 Gene

No Compound Related Data Available

Transcripts for FKSG29 Gene

mRNA/cDNA for FKSG29 Gene

(2) Additional mRNA sequences :

Unigene Clusters for FKSG29 Gene

FKSG29:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FKSG29 Gene

No ASD Table

Relevant External Links for FKSG29 Gene

GeneLoc Exon Structure for
FKSG29

Expression for FKSG29 Gene

SOURCE GeneReport for Unigene cluster for FKSG29 Gene:

Hs.721900
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FKSG29 Gene

Orthologs for FKSG29 Gene

No data available for Orthologs and Evolution for FKSG29 Gene

Paralogs for FKSG29 Gene

No data available for Paralogs for FKSG29 Gene

Variants for FKSG29 Gene

Sequence variations from dbSNP and Humsavar for FKSG29 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1003621387 -- 99,351,290(+) TTACT(C/T)GTAAA intron-variant, upstream-variant-2KB
rs1004142171 -- 99,351,147(+) GGGAT(-/A)AAAAA intron-variant, upstream-variant-2KB
rs1004877708 -- 99,351,621(+) TGGCT(A/G)ATGAT intron-variant, nc-transcript-variant
rs1005475423 -- 99,350,259(+) TACCT(C/T)GGCAC intron-variant, upstream-variant-2KB
rs1006133578 -- 99,351,233(+) TTGTG(A/G)CTCTC intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for FKSG29 Gene

Disorders for FKSG29 Gene

Relevant External Links for FKSG29

Genetic Association Database (GAD)
FKSG29
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FKSG29

No disorders were found for FKSG29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FKSG29 Gene

Publications for FKSG29 Gene

  1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 60
  2. Genome-wide association study identifies novel alleles associated with risk of cutaneous basal cell carcinoma and squamous cell carcinoma. (PMID: 21700618) Nan H … Han J (Human molecular genetics 2011) 45 60

Products for FKSG29 Gene

Sources for FKSG29 Gene

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