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Aliases & Descriptions for FOXO3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases AF6q21 1 , 2 DKFZp781A0677 2 FKHRL1 2 , 3 , 5 FKHRL1P2 2 FOXO2 1 , 2 FOXO3A 2 , 3 , 5 MGC12739 2 MGC31925 2 OTTHUMP00000016944 2
Descriptions AF6q21 protein 3 Forkhead in rhabdomyosarcoma-like 1 3 forkhead box O3 2 forkhead box O3A 2 forkhead homolog (rhabdomyosarcoma) like 1 2 forkhead, Drosophila, homolog of, in rhabdomyosarcoma-like 1 2
Search outside databases for aliases for FOXO3 gene
Summaries for FOXO3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for FOXO3 : This gene belongs to the forkhead family of transcription factors which are characterized by adistinct forkhead domain. This gene likely functions as a trigger for apoptosis through expressionof genes necessary for cell death. Translocation of this gene with the MLL gene is associated withsecondary acute leukemia. Alternatively spliced transcript variants encoding the same protein havebeen observed. [provided by RefSeq] UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524 Function : Transcriptional activator which triggers apoptosis in the absence of survival factors,including neuronal cell death upon oxidative stress. Recognizes and binds to the DNA sequence5'-[AG]TAAA[TC]A-3'
Gene Wiki entry for FOXO3
Genomic Location for FOXO3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 6q21 Ensembl cytogenetic band: 6q21 HGNC cytogenetic band: 6q21 FOXO3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure
GeneLoc location for GC06P108988:
(about GC identifiers )
Start:
108,987,719 bp from pter
End:
109,112,664 bp from pter
Size:
124,946 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000006.10 NT_025741.14 Proteins for FOXO3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524 (See
protein sequence )Recommended Name: Forkhead box protein O3 Size : 673 amino acids; 71277 Da
Subunit : Interacts with YWHAB/14-3-3-beta and YWHAZ/14-3-3-zeta, which are required for cytosolicsequestration. Upon oxidative stress, interacts with STK4, which disrupts interaction withYWHAB/14-3-3-beta and leads to nuclear translocation
Subcellular location : Cytoplasm, cytosol. Nucleus. Note=Translocates to the nucleus upon oxidativestress and in the absence of survival factors
PDB structure from and Proteopedia : 2K86 (3D)
 2UZK (3D)
 
Secondary accessions : O15171 Q5T2I7 Q9BZ04
Post-translational modifications:
In the presence of survival factors such as IGF-1, phosphorylated on Thr-32 and Ser-253 byAKT1/PKB. This phosphorylated form then interacts with 14-3-3 proteins and is retained in thecytoplasm. Survival factor withdrawal induces dephosphorylation and promotes translocation to thenucleus where the dephosphorylated protein induces transcription of target genes and triggersapoptosis. Although AKT1/PKB doesn't appear to phosphorylate Ser-315 directly, it may activateother kinases that trigger phosphorylation at this residue. Phosphorylated by STK4 on Ser-209 uponoxidative stress, which leads to dissociation from YWHAB/14-3-3-beta and nuclear translocation1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001446.1 NP_963853.1 ENSEMBL proteins: ENSP00000339527 ENSP00000385824 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for FOXO3: Assays for FOXO3:
Protein
Domains/ Families for FOXO3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O43524 ProtoNet protein and cluster: O43524
UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524 Similarity : Contains 1 fork-head DNA-binding domain
Gene Function for FOXO3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (FOXO3 ) Millipore RNAi Products for the Analysis of FOXO3 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (FOXO3A )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001455 Applied Biosystems Silencer ® siRNAs for FOXO3 Sigma-Aldrich siRNA for FOXO3 Sigma-Aldrich shRNA Panels and shRNA for FOXO3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001455                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001455                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001455  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_201559 UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524 Function : Transcriptional activator which triggers apoptosis in the absence of survival factors,including neuronal cell death upon oxidative stress. Recognizes and binds to the DNA sequence5'-[AG]TAAA[TC]A-3'
13 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Foxo3) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for FOXO3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for FOXO3 (Your Favorite Gene powered by Ingenuity) (see all 8
) Gene Network CentralTM Interacting Genes and Proteins Network for FOXO3 5/89 Interacting proteins for FOXO3 (ENSP00000339527 3 O43524 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 89
)About this table 5 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for FOXO3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for FOXO3 9 Novoseek chemical compound relationships for FOXO3 gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
phosphatidylinositol
69.41
10
14701673 (1), 15207915 (1), 16687394 (1), 18388194 (1) (see all 8 )
wortmannin
45.84
1
18385518 (1)
phosphoinositide
44.24
4
19302476 (1), 12150827 (1), 12504093 (1), 15322085 (1)
glycogen
39.35
6
18476967 (1), 11237865 (1), 17522055 (1), 12139625 (1) (see all 5 )
tyrosine
32.77
6
17900262 (2), 19285077 (1), 12456669 (1), 12506011 (1)
threonine
18.34
1
12359217 (1)
oxygen
0.00
3
15741276 (1), 15674333 (1), 14713953 (1)
oligonucleotide
0.00
1
16687394 (1)
nitric oxide
0.00
9
12599246 (4), 17044646 (2), 16687394 (1)
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Transcripts for FOXO3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (FOXO3 ) Millipore RNAi Products for the Analysis of FOXO3 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (FOXO3A )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001455 Sigma-Aldrich siRNA for FOXO3 Sigma-Aldrich shRNA Panels and shRNA for FOXO3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001455 NM_201559
REFSEQ mRNAs for FOXO3 gene (2 alternative transcripts): NM_001455.3 NM_201559.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001455 NM_201559
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001455                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001455                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001455  
Additional cDNA sequence: AB072905.1 AF032886.1 AJ001589.1 AK024103.1 AK092357.1 AK122861.1 AK301304.1 AK303933.1 AK311587.1 BC020227.1 BC021224.2 BC045800.1 BC068552.1 CR623727.1 CR749261.1
19 DOTS entries : DT.100649722 DT.95294944 DT.100755530 DT.216108 DT.121004366 DT.100649556 DT.101981892 DT.97771444 DT.100823907 DT.100755532 DT.91746714 DT.100726911 DT.95200828 DT.95354316 DT.121313784 DT.91901643 DT.95162771 DT.100702119 DT.99940058
24/142 AceView cDNA sequences (see all 142
):AI031844 AF032886 BX282546 BE502772 BC020227 NM_001455 BF222626 CF541001 AI075785 AI919238 BC021224 BQ214507 AA603521 BQ636125 AI421125 AA465236 AI554317 BM718517 N29118 BX503867 BG057950 NM_201559 CA389775 AW001951
Unigene Cluster for FOXO3: Forkhead box O3 Hs.220950 [show with all ESTs ] Unigene Representative Sequence: NM_001455 GeneLoc Exon Structure 2 Ensembl transcripts including schematic representations : ENST00000343882
ENST00000406360
Expression for FOXO3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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FOXO3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for FOXO3 1 / 2
19 probe-sets matching FOXO3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAAATAAAGCSOURCE GeneReport for Unigene cluster: Hs.220950 UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524 Tissue specificity : Ubiquitous
Orthologs for FOXO3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for FOXO3 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for FOXO3 ENSEMBL Gene Tree for FOXO3 Paralogs for FOXO3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for FOXO3 gene FOXO6 2 FOXO4 2 FOXO1 2 FOXO3B 2 Pseudogenes 1 related pseudogene
SNPs/Variants for FOXO3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for FOXO3 (up to first 250kb)
Disorders & Mutations for FOXO3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602681 UniProtKB/Swiss-Prot: FOXO3_HUMAN, O43524
A chromosomal aberration involving FOXO3 is found in secondary acute leukemias.Translocation t(6;11)(q21;q23) with MLL/HRX
10/12 Novoseek disease relationships for FOXO3 gene (see all 12
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
rhabdomyosarcoma
38.92
1
12196101 (1)
breast cancer
33.90
26
18312651 (4), 17575143 (4), 14527951 (3), 19276163 (2) (see all 11 )
prostate cancer
31.39
11
12351634 (3), 17522055 (2), 15798096 (2), 17563745 (1) (see all 5 )
leukemia
27.79
2
11278373 (1), 18055337 (1)
tumors
24.79
17
15551757 (3), 15084260 (2), 18312651 (2), 12351634 (2) (see all 10 )
myeloid leukemia chronic
20.26
4
17900262 (1), 12456669 (1), 18644865 (1)
cancer
20.05
4
16861905 (1), 18239069 (1), 19299143 (1), 18158893 (1)
necrosis
7.54
3
17900262 (1), 18166693 (1), 15322085 (1)
neovascularization
0.41
1
16100571 (1)
neurodegenerative diseases
0.00
1
18045156 (1)
About this table Human Genome Epidemiology Navigator: FOXO3 (1 document)
Medical News for FOXO3 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for FOXO3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/217 PubMed articles for FOXO3 gene (see all 217
): Cloning and characterization of three human forkhead genes that comprise an FKHR-like gene subfamily. (PubMed id 9479491) 1, 2, 3, 4 Anderson M.J.... Arden K.C. (1998) Protein kinase SGK mediates survival signals by phosphorylating the forkhead transcription factor FKHRL1 (FOXO3a). (PubMed id 11154281) 1, 3, 4 Brunet A.... Greenberg M.E. (2001) Akt promotes cell survival by phosphorylating and inhibiting a Forkhead transcription factor. (PubMed id 10102273) 1, 3, 4 Brunet A.... Greenberg M.E. (1999) Crystal structure of the human FOXO3a-DBD/DNA complex suggests the effects of post-translational modification. (PubMed id 17940099) 3, 4 Tsai K.L....Hsiao C.D. (2007) A conserved MST-FOXO signaling pathway mediates oxidative-stress responses and extends life span. (PubMed id 16751106) 3, 4 Lehtinen M.K.... Bonni A. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404) 3, 4 Mungall A.J.... Beck S. (2003) AF6q21, a novel partner of the MLL gene in t(6;11)(q21;q23), defines a forkhead transcriptional factor subfamily. (PubMed id 9345057) 3, 4 Hillion J.... Bernard O.A. (1997) Regulation of FOXO3a by brain-derived neurotrophic factor in differentiated human SH-SY5Y neuroblastoma cells. (PubMed id 15207915) 1, 3 Zhu W....Li X. (2004) Forkhead box transcription factor FOXO3a suppresses estrogen-dependent breast cancer cell proliferation and tumorigenesis. (PubMed id 18312651) 1, 3 Zou Y....Hu M.C. (2008)
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Genome Databases showing FOXO3
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing FOXO3
(According to HUGE )
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Specialized Databases showing FOXO3 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Licensable Technologies for FOXO3 gene: Services for FOXO3 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for FOXO3:
Antibodies & Assays for FOXO3   (Foxo3a)
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009