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Aliases & Descriptions for FOXO1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| FKH1 1, 2 | | FKHR 2, 3 | | FOXO1A 2, 3 | | OTTHUMP00000018301 2 |
| | | Descriptions |
|---|
| Forkhead box protein O1A 3 | | Forkhead in rhabdomyosarcoma 3 | | forkhead box O1 2 | | forkhead box O1A (rhabdomyosarcoma) 2 | | forkhead homolog in rhabdomyosarcoma 1, 2 | | forkhead, Drosophila, homolog of, in rhabdomyosarcoma 2 |
|
| | Search outside databases for aliases for FOXO1 gene |
Summaries for FOXO1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for FOXO1: This gene belongs to the forkhead family of transcription factors which are characterized by a distinct forkhead domain. The specific function of this gene has not yet been determined; however, it may play a role in myogenic growth and differentiation. Translocation of this gene with PAX3 has been associated with alveolar rhabdomyosarcoma. [provided by RefSeq] UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778Function: Transcription factorGene Wiki entry for FOXO1 |
Genomic Location for FOXO1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 13q14.1 Ensembl cytogenetic band: 13q14.11 HGNC cytogenetic band: 13q14.1FOXO1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 13 GeneLoc Exon Structure GeneLoc location for GC13M040028:
(about GC identifiers)
Start:
|
40,027,801 bp from pter |
End:
|
40,138,734 bp from pter |
Size:
|
110,934 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000013.9 NT_024524.13
| Proteins for FOXO1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778 (See
protein sequence)Recommended Name: Forkhead box protein O1 Size: 655 amino acids; 69662 Da
Subunit: Interacts with LRPPRC (By similarity)
Subcellular location: Cytoplasm. Nucleus. Note=Shuttles between cytoplasm and nucleus
PDB structures from and Proteopedia :3CO6 (3D)
 3CO7 (3D)
 3COA (3D)
 
Secondary accessions: O43523 Q5VYC7 Q6NSK6Post-translational modifications:
Phosphorylated by AKT1; insulin-induced (By similarity). IGF1 rapidly induces phosphorylation of Ser-256, Thr-24, and Ser-319. Phosphorylation of Ser-256 decreases DNA-binding activity and promotes the phosphorylation of Thr-24, and Ser-319, permitting phosphorylation of Ser-322 and Ser-325, probably by CK1, leading to nuclear exclusion and loss of function. Phosphorylation of Ser-329 is independent of IGF1 and leads to reduced function. Phosphorylated upon DNA damage, probably by ATM or ATR1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002006.2
ENSEMBL proteins: ENSP00000368880
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for FOXO1: Assays for FOXO1: | Protein
Domains/ Families for FOXO1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q12778
ProtoNet protein and cluster: Q12778 UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778Similarity: Contains 1 fork-head DNA-binding domain | Gene Function for FOXO1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002015
Applied Biosystems Silencer® siRNAs for FOXO1
Sigma-Aldrich siRNA for FOXO1  Sigma-Aldrich shRNA Panels and shRNA for FOXO1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002015                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002015                                  untagged cDNA clone in CMV expression vector: NM_002015 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002015
UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778Function: Transcription factor14 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Foxo1):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for FOXO1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/14 Sigma-Aldrich "Your Favorite Gene" Pathways for FOXO1 (Your Favorite Gene powered by Ingenuity) (see all 14
) 
Gene Network CentralTM Interacting Genes and Proteins Network for FOXO1 
5/146 Interacting proteins for FOXO1 (ENSP000003688803 Q127781) via UniProtKB, MINT, and/or STRING (see all 146
)About this table
5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
): About this table
|
Drugs & Compounds for FOXO1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for FOXO1 10/11 Novoseek chemical compound relationships for FOXO1 gene (see all 11
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| phosphatidylinositol |
66.00 |
13 |
11672436 (1), 15778376 (1), 17202144 (1), 12606579 (1) (see all 8) |
| phosphoenolpyruvate |
53.17 |
1 |
10913147 (1) |
| glycogen |
49.45 |
9 |
15494423 (1), 15574783 (1), 12702569 (1), 16973122 (1) (see all 9) |
| phosphoinositide |
47.51 |
2 |
12150827 (1), 17986386 (1) |
| threonine |
36.48 |
6 |
12359217 (1), 13679577 (1), 11733864 (1), 18211894 (1) |
| manganese superoxide |
19.47 |
1 |
17408630 (1) |
| glucose |
18.23 |
12 |
19141580 (3), 10960473 (2), 13679577 (1), 16670091 (1) (see all 6) |
| progesterone |
0.89 |
9 |
15987820 (4), 18096667 (1), 17556536 (1) |
| estradiol |
0.00 |
1 |
16614392 (1) |
| tyrosine |
0.00 |
1 |
11825565 (1) |
About this table
|
Transcripts for FOXO1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002015
Sigma-Aldrich siRNA for FOXO1  Sigma-Aldrich shRNA Panels and shRNA for FOXO1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002015 REFSEQ mRNAs for FOXO1 gene: NM_002015.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002015               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002015                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002015                                  untagged cDNA clone in CMV expression vector: NM_002015  Additional cDNA sequence: AF032885.1 AK310511.1 BC021981.2 BC070065.1 BT007455.1 BX648278.1 U02310.1 U36922.1 8 DOTS entries: DT.317826 DT.92454302 DT.40105832 DT.120780767 DT.95151680 DT.91904470 DT.101958152 DT.92454306 24/263 AceView cDNA sequences (see all 263
):BP345665 CA447146 AI889401 H82288 BQ879203 CF529560 BC021981 AW182316 NM_002015 AF032885 AW072902 CB069714 AI188507 AW050917 T85080 BQ718121 T85079 AA134749 BC070065 AA130464 BF733006 AI813640 CA309741 CA503017 Unigene Cluster for FOXO1: Forkhead box O1 Hs.370666 [show with all ESTs]Unigene Representative Sequence: NM_002015
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for FOXO1
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6 | |
| SP1: | |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | - |   | - |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | - |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for FOXO1
1 Ensembl transcript including schematic representation: ENST00000379561
|
Expression for FOXO1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| FOXO1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for FOXO1
1 / 2 5 probe-sets matching FOXO1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CCTCCTGCAT
SOURCE GeneReport for Unigene cluster: Hs.370666 UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778Tissue specificity: Ubiquitous |
Orthologs for FOXO1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for FOXO1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for FOXO1
ENSEMBL Gene Tree for FOXO1 | Paralogs for FOXO1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for FOXO1 gene
- FOXO62 FOXO42 FOXO32 FOXO3B2
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for FOXO1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for FOXO1 (up to first 250kb)
|
Disorders & Mutations for FOXO1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 136533
UniProtKB/Swiss-Prot: FOXO1_HUMAN, Q12778
Chromosomal aberrations involving FOXO1 are a cause of rhabdomyosarcoma 2 (RMS2) [MIM:268220]; also known as alveolar rhabdomyosarcoma. Translocation (2;13)(q35;q14) with PAX3; translocation t(1;13)(p36;q14) with PAX7. The resulting protein is a transcriptional activator10/18 Novoseek disease relationships for FOXO1 gene (see all 18
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| rhabdomyosarcoma alveolar |
92.53 |
19 |
11171995 (2), 7630639 (1), 8875708 (1), 8889501 (1) (see all 17) |
| muscle cancer |
85.53 |
1 |
16140913 (1) |
| rhabdomyosarcoma |
75.12 |
13 |
11672436 (1), 12196101 (1), 12456685 (1), 12606579 (1) (see all 9) |
| sarcoma |
29.79 |
3 |
18303411 (1) |
| tumors |
29.53 |
16 |
12351634 (2), 8634710 (1), 15688409 (1), 19047133 (1) (see all 14) |
| insulin resistance |
24.15 |
6 |
10912522 (1), 15910615 (1), 16041833 (1), 17077083 (1) (see all 6) |
| fatty liver |
23.95 |
1 |
17408630 (1) |
| childhood cancer |
22.56 |
2 |
10700864 (1), 15184910 (1) |
| hyperinsulinemia |
20.15 |
3 |
17408630 (1), 16670091 (1), 17317207 (1) |
| insulin sensitivity |
19.21 |
4 |
16670091 (1), 16041833 (1), 17317207 (1) |
About this table
Human Genome Epidemiology Navigator: FOXO1 (9 documents)
|
Medical News for FOXO1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for FOXO1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/281 PubMed articles for FOXO1 gene (see all 281
):- Fusion of a fork head domain gene to PAX3 in the solid tumour alveolar rhabdomyosarcoma. (PubMed id 8275086)2, 3, 4 Galili N.... Barr F.G. (1993)
- Phosphorylation of serine 256 suppresses transactivation by FKHR (FOXO1) by multiple mechanisms. Direct and indirect effects on nuclear/cytoplasmic shuttling and DNA binding. (PubMed id 12228231)1, 3, 4 Zhang X.... Unterman T.G. (2002)
- Cloning and characterization of three human forkhead genes that comprise an FKHR-like gene subfamily. (PubMed id 9479491)1, 3, 4 Anderson M.J.... Arden K.C. (1998)
- Two novel phosphorylation sites on FKHR that are critical for its nuclear exclusion. (PubMed id 11980723)1, 3, 4 Rena G....Cohen P. (2002)
- The DNA sequence and analysis of human chromosome 13. (PubMed id 15057823)3, 4 Dunham A.... Ross M.T. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- The kinase DYRK1A phosphorylates the transcription factor FKHR at Ser329 in vitro, a novel in vivo phosphorylation site. (PubMed id 11311120)3, 4 Woods Y.L.... Cohen P. (2001)
- Phosphorylation of the transcription factor forkhead family member FKHR by protein kinase B. (PubMed id 10358075)3, 4 Rena G.... Cohen P. (1999)
- Hepatocyte nuclear factor-4 is a novel downstream target of insulin via FKHR as a signal-regulated transcriptional inhibitor. (PubMed id 12519792)1, 3 Hirota K....Fukamizu A. (2003)
- Aberrant over-expression of a forkhead family member, FOXO1A, in a brain tumor cell line. (PubMed id 17442120)1, 3 Dallas P.B....Kees U.R. (2007)
|
Search for FOXO1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing FOXO1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing FOXO1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing FOXO1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for FOXO1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for FOXO1:

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Incremental update: 13 Oct 2009
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