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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FKBP9 Gene

protein-coding   GIFtS: 51
GCID: GC07P032997

FK506 Binding Protein 9, 63 KDa

(Previous name: FK506-binding protein 9 (63 kD))
  Search for FKBP9
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
FK506 Binding Protein 9, 63 KDa1 2     PPIase FKBP92 3
63 KDa FK506-Binding Protein2 3     EC 5.2.1.83 8
63 KDa FKBP2 3     FK506-Binding Protein 9 (63 KD)1
FKBP-632 3     PPIase2
FKBP-92 3     Peptidyl-Prolyl Cis-Trans Isomerase FKBP92
FKBP602 3     rotamase2
FKBP632 3     Rotamase3
FK506-Binding Protein 92 3     

External Ids:    HGNC: 37251   Entrez Gene: 113282   Ensembl: ENSG000001226427   UniProtKB: O953023   

Export aliases for FKBP9 gene to outside databases

Previous GC identifers: GC07M055212 GC07M055456 GC07M055491 GC07P032739 GC07P032770 GC07P032963 GC07P032875


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

GeneCards Summary for FKBP9 Gene: 
FKBP9 (FK506 binding protein 9, 63 kDa) is a protein-coding gene. Among its related super-pathways are Chaperonin-mediated protein folding and Post-translational protein modification. GO annotations related to this gene include FK506 binding and calcium ion binding. An important paralog of this gene is FKBP11.

UniProtKB/Swiss-Prot: FKBP9_HUMAN, O95302
Function: PPIases accelerate the folding of proteins during protein synthesis

Gene Wiki entry for FKBP9 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NT_007819.17  NC_018918.2  NT_079592.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FKBP9 gene promoter:
         NRSF form 1   Olf-1   Pax-2   Pax-2a   NRSF form 2   PPAR-alpha   Nkx6-1   COMP1   HOXA5   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): FKBP9 promoter sequence
   Search SABiosciences Chromatin IP Primers for FKBP9

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FKBP9


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7p11.1   Ensembl cytogenetic band:  7p14.3   HGNC cytogenetic band: 7p11.1

FKBP9 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FKBP9 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P032997:  view genomic region     (about GC identifiers)

Start:
32,997,005 bp from pter      End:
33,046,543 bp from pter
Size:
49,539 bases      Orientation:
plus strand

1 alternative location:
Chr7+,CRA_TCAG 33,041,528-33,091,087     

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: FKBP9_HUMAN, O95302 (See protein sequence)
Recommended Name: Peptidyl-prolyl cis-trans isomerase FKBP9 precursor  
Size: 570 amino acids; 63084 Da
Subcellular location: Endoplasmic reticulum (By similarity)
Secondary accessions: B3KY35 Q2M2A1 Q3MIR7 Q6IN76 Q6P2N1 Q96EX5 Q96IJ9

Explore the universe of human proteins at neXtProt for FKBP9: NX_O95302

Explore proteomics data for FKBP9 at MOPED 

Post-translational modifications:

  • UniProtKB: Phosphorylated (By similarity)
  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_O95302

  • 4/8 DME Specific Peptides for FKBP9 (O95302) (see all 8)
     MCVGEKR  DFVRYHY  RYHYNGT  PPHLGYG 

    FKBP9 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    FKBP9 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_001271270.1  NP_001271272.1  NP_009201.2  

    ENSEMBL proteins: 
     ENSP00000242209   ENSP00000391034   ENSP00000439250   ENSP00000437504   ENSP00000441317  
    Reactome Protein details: O95302
    Human Recombinant Protein Products for FKBP9: 
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    Novus Biologicals FKBP9 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for FKBP9 

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005783endoplasmic reticulum ISS--
    GO:0016020membrane IBA--

    FKBP9 for ontologies           About GeneDecksing



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    Cloud-Clone Corp. ELISAs for FKBP9 
    Cloud-Clone Corp. CLIAs for FKBP9


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    EFHAND: EF-hand domain containing

    5 InterPro protein domains:
     IPR011992 EF-hand-like_dom
     IPR002048 EF_hand_dom
     IPR023566 PPIase_FKBP
     IPR018247 EF_Hand_1_Ca_BS
     IPR001179 PPIase_FKBP_dom

    Graphical View of Domain Structure for InterPro Entry O95302

    ProtoNet protein and cluster: O95302

    UniProtKB/Swiss-Prot: FKBP9_HUMAN, O95302
    Similarity: Contains 2 EF-hand domains
    Similarity: Contains 4 PPIase FKBP-type domains


    FKBP9 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: FKBP9_HUMAN, O95302
    Function: PPIases accelerate the folding of proteins during protein synthesis
    Catalytic activity: Peptidylproline (omega=180) = peptidylproline (omega=0)
    Enzyme regulation: Inhibited by FK506 (By similarity)

         Enzyme Number (IUBMB): EC 5.2.1.81 2

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003755peptidyl-prolyl cis-trans isomerase activity IBA--
    GO:0005509calcium ion binding ISS--
    GO:0005528FK506 binding IBA--
         
    FKBP9 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for FKBP9:
     Decreased influenza A/WSN/33 r 

         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Fkbp9):
     behavior/neurological  other 

    FKBP9 for phenotypes           About GeneDecksing

    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for FKBP9 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for FKBP9

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for FKBP9 
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for FKBP9 

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FKBP9
    8 QIAGEN miScript miRNA Assays for microRNAs that regulate FKBP9:
    hsa-miR-1266 hsa-miR-607 hsa-miR-499-3p hsa-miR-222 hsa-miR-221 hsa-miR-4310 hsa-miR-593* hsa-miR-3127-5p
    SwitchGear 3'UTR luciferase reporter plasmidFKBP9 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for FKBP9
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FKBP9

    Gene Editing
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    Clone
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                         Customized lentivirus expression plasmids for stable overexpression of FKBP9 

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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FKBP9


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section

    SuperPaths for FKBP9 About                                                                                                See pathways by source

    SuperPathContained pathways About
    1Chaperonin-mediated protein folding
    Chaperonin-mediated protein folding0.91
    Association of TriC/CCT with target proteins during biosynthesis0.60
    Protein folding0.91
    2Asparagine N-linked glycosylation
    Metabolism of proteins0.35

    Pathways by source                                                                                                                                                                 See SuperPaths
    Show all pathways


    4        Reactome Pathways for FKBP9
        Association of TriC/CCT with target proteins during biosynthesis
    Chaperonin-mediated protein folding
    Metabolism of proteins
    Protein folding



    FKBP9 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for FKBP9

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    4 Interacting proteins for FKBP9 (O953023 ENSP000002422094) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SLC2A4P146723I2D: score=1 
    SSBP2P818773I2D: score=1 
    ELAVL1ENSP000003852694STRING: ENSP00000385269
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000413protein peptidyl-prolyl isomerization IBA--
    GO:0006457protein folding ISS--
    GO:0018208peptidyl-proline modification IBA--

    FKBP9 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for FKBP9

    Search CenterWatch for drugs/clinical trials and news about FKBP9

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FKBP9 gene (3 alternative transcripts): 
    NM_001284341.1  NM_001284343.1  NM_007270.4  

    Unigene Cluster for FKBP9:

    FK506 binding protein 9, 63 kDa
    Hs.103934  [show with all ESTs]
    Unigene Representative Sequence: NM_007270
    15 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000242209(uc011kak.1 uc003tdh.3 uc011kal.2 uc011kam.2)
    ENST00000469202 ENST00000494374(uc010kwm.3) ENST00000464334 ENST00000485309
    ENST00000472007 ENST00000489038 ENST00000418354 ENST00000463443 ENST00000468510
    ENST00000475220 ENST00000471066 ENST00000538336 ENST00000538443 ENST00000490776

    miRNA
    Products:
         
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FKBP9
    8 QIAGEN miScript miRNA Assays for microRNAs that regulate FKBP9:
    hsa-miR-1266 hsa-miR-607 hsa-miR-499-3p hsa-miR-222 hsa-miR-221 hsa-miR-4310 hsa-miR-593* hsa-miR-3127-5p
    SwitchGear 3'UTR luciferase reporter plasmidFKBP9 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for FKBP9
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat FKBP9
    Clone
    Products:
         
    OriGene clones in human, mouse for FKBP9 (see all 7)
    OriGene ORF clones in mouse, rat for FKBP9
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: FKBP9 (NM_007270)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for FKBP9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat FKBP9
    Sirion Biotech Customized lentivirus for stable overexpression of FKBP9 
                         Customized lentivirus expression plasmids for stable overexpression of FKBP9 
    Primer
    Products:
        
    OriGene qSTAR qPCR primer pairs in human, mouse for FKBP9
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat FKBP9
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FKBP9
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FKBP9

    Additional mRNA sequence: 

    AF089745.1 AK075331.1 AK128597.1 AK293440.1 AK293954.1 AK294266.1 AK300328.1 AK304643.1 
    AK316290.1 AL050187.1 BC007443.2 BC064418.1 BC072422.1 BC099918.1 BC101723.1 BC112053.1 
    BC127736.1 BC127737.1 BC150541.1 BC150542.1 

    15 DOTS entries:

    DT.449336  DT.101961212  DT.101984736  DT.91759875  DT.75192892  DT.100893661  DT.91759870  DT.100893681 
    DT.100044840  DT.100771535  DT.121048784  DT.121048642  DT.91686654  DT.91759878  DT.121102212 

    24/403 AceView cDNA sequences (see all 403):

    BM723779 BM987333 BF222013 AA987877 AA636024 BU528083 BM802932 F12856 
    AA077898 CF126624 F10456 CR615769 BQ878006 BQ688269 BM921066 BQ318872 
    CD722631 CB270796 NM_007270 CB150411 AA369148 AF089745 BM782200 AW771016 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FKBP9 expression in normal human tissues (normalized intensities)      FKBP9 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: GAATAAATGT
    FKBP9 Expression
    About this image


    FKBP9 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/7 selected tissues (see all 7) fully expand
     
     Bone (Muscoskeletal System)    fully expand to see all 5 entries
             Endochondral Facial Bones
             sensory organ/ear/inner ear   
     
     Cartilage (Muscoskeletal System)    fully expand to see all 5 entries
             Intervertebral Disc Nucleus Pulposus Cells Lumbar Intervertebral Disc
             sensory organ/nose/nasal septum   
     
     Neural Crest (Gastrulation Derivatives)    fully expand to see all 2 entries
             skeleton/cranium/viscerocranium   
     
     Primitive Streak (Early Embryonic Tissues)
             Notochord
     
     Nose (Sensory Organs)
             sensory organ/nose/nasal septum   

    See FKBP9 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FKBP9

    SOURCE GeneReport for Unigene cluster: Hs.103934
        SABiosciences Custom PCR Arrays for FKBP9
    Primer
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    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat FKBP9
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FKBP9

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals and fungi.

    Orthologs for FKBP9 gene from 8/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Fkbp91 , 5 FK506 binding protein 91, 5 88.5(n)1
    93.98(a)1
      6 (27.74 cM)5
    270551  NM_012056.21  NP_036186.21 
     568320595 
    chicken
    (Gallus gallus)
    Aves FKBP91 FK506 binding protein 9, 63 kDa 76.79(n)
    81.19(a)
      395652  NM_204847.1  NP_990178.1 
    lizard
    (Anolis carolinensis)
    Reptilia FKBP96
    FK506 binding protein 9, 63 kDa
    79(a)
    1 ↔ 1
    6(45339750-45371649)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC043741.12   -- 75.52(n)    BC043741.1 
    zebrafish
    (Danio rerio)
    Actinopterygii fkbp91 FK506 binding protein 9 66.73(n)
    67.09(a)
      445126  NM_001003520.1  NP_001003520.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG147156
    --
    33(a)
    possible ortholog
    3R(7499941-7500645)
    worm
    (Caenorhabditis elegans)
    Secernentea fkb-51 Protein FKB-5 47.27(n)
    36.36(a)
      171974  NM_058856.2  NP_491257.1 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes FPR26
    Membrane-bound peptidyl-prolyl cis-trans isomerase...
    37(a)
    1 → many
    IV(1480425-1480832)


    ENSEMBL Gene Tree for FKBP9 (if available)
    TreeFam Gene Tree for FKBP9 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FKBP9 gene
    FKBP112  FKBP22  FKBP142  FKBP102  FKBP72  
    11 SIMAP similar genes for FKBP9 using alignment to 6 protein entries:     FKBP9_HUMAN (see all proteins):
    FKBP9L    DKFZp666D193    FKBP2    FKBP10    FKBP11    FKBP7
    FKBP1C    FKBP12-Exip2    FKBP1B    FKBP1A    FKBP14

    FKBP9 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for FKBP9
    PGOHUM00000232699


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1376 SNPs in FKBP9 are shown (see all 1376)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1889605041,2
    --32905670(-) CCAATC/TGGTCC 1 -- int10--------
    rs1847865641,2
    --32905679(-) CTGAAA/GGAGCC 1 -- int10--------
    rs1927403331,2
    --32905813(-) CAATTC/TCCCAC 1 -- int10--------
    rs1167818681,2
    C,F--32905857(-) CTGCCG/AAGTGA 1 -- int11Minor allele frequency- A:0.02WA 118
    rs1893852981,2
    --32905906(-) GGCAGA/GAGCCC 1 -- int10--------
    rs1844529161,2
    --32905930(-) TACTTA/GGGTTT 1 -- int10--------
    rs1400011101,2
    C--32905949(-) ACCCCA/GCCACC 1 -- int10--------
    rs1925005051,2
    --32906003(-) ATTCCA/GCACTC 1 -- int10--------
    rs1880435631,2
    --32906043(-) CCGATC/TGCCAG 1 -- int10--------
    rs1834002981,2
    --32906053(-) CATGAA/CGATTC 1 -- int10--------

    HapMap Linkage Disequilibrium report for FKBP9 (32997005 - 33046543 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 4 variations for FKBP9:    About this table     
    Variant IDTypeSubtypePubMed ID
    esv2734229CNV Deletion23290073
    dgv1127e201CNV Deletion23290073
    nsv436907CNV Insertion17901297
    esv27091CNV Gain+Loss19812545

    1 SABiosciences Cancer Mutation PCR Assay for FKBP9:
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    42966p.R107H
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FKBP9 gene, integrated from 9 sources (see all 13):
    (articles sorted by number of sources associating them with FKBP9)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    2. Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. (PubMed id 12754519)1, 2 Zhang H.... Aebersold R. (2003)
    3. Genomic organization of mouse and human 65 kDa FK506-binding protein genes and evolution of the FKBP multigene family. (PubMed id 12036304)1, 3 Patterson C.E....Davis E.C. (2002)
    4. Biochemical analysis of mouse FKBP60, a novel member of the FKBP family. (PubMed id 10524204)1, 2 Shadidy M.... Krauss S. (1999)
    5. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    6. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    7. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
    8. Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201)1 Abdelmohsen K....Gorospe M. (2009)
    9. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
    10. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)1 Otsuki T....Isogai T. (2005)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 11328 HGNC: 3725 AceView: FKBP9 Ensembl:ENSG00000122642 euGenes: HUgn11328
    ECgene: FKBP9 H-InvDB: FKBP9

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FKBP9 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FKBP9 gene:
    Search GeneIP for patents involving FKBP9

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 4 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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