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Aliases for FKBP1C Gene

Aliases for FKBP1C Gene

  • FK506 Binding Protein 1C 2 3 5
  • BA184C23.2 3

External Ids for FKBP1C Gene

Previous GeneCards Identifiers for FKBP1C Gene

  • GC06P063918
  • GC06P063979
  • GC06P063921
  • GC06P061101

Summaries for FKBP1C Gene

GeneCards Summary for FKBP1C Gene

FKBP1C (FK506 Binding Protein 1C) is a Pseudogene. Diseases associated with FKBP1C include left ventricular noncompaction. GO annotations related to this gene include peptidyl-prolyl cis-trans isomerase activity and calcium channel inhibitor activity. An important paralog of this gene is FKBP1A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FKBP1C Gene

Genomics for FKBP1C Gene

Genomic Location for FKBP1C Gene

Chromosome:
6
Start:
63,211,446 bp from pter
End:
63,213,024 bp from pter
Size:
1,579 bases
Orientation:
Plus strand

Genomic View for FKBP1C Gene

Genes around FKBP1C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FKBP1C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FKBP1C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FKBP1C Gene

No data available for Regulatory Elements for FKBP1C Gene

Proteins for FKBP1C Gene

  • Protein details for FKBP1C Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5VVH2
    Recommended name:
    Peptidyl-prolyl cis-trans isomerase
    Protein Accession:
    Q5VVH2

    Protein attributes for FKBP1C Gene

    Size:
    108 amino acids
    Molecular mass:
    12179 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FKBP1C Gene

Proteomics data for FKBP1C Gene at MOPED

Post-translational modifications for FKBP1C Gene

No Post-translational modifications

Other Protein References for FKBP1C Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FKBP1C Gene

Domains & Families for FKBP1C Gene

Gene Families for FKBP1C Gene

Protein Domains for FKBP1C Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FKBP1C: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FKBP1C Gene

Function for FKBP1C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FKBP1C Gene

Localization for FKBP1C Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FKBP1C Gene COMPARTMENTS Subcellular localization image for FKBP1C gene
Compartment Confidence
cytosol 4
endoplasmic reticulum 2
nucleus 2
plasma membrane 2
cytoskeleton 1
extracellular 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FKBP1C Gene

Pathways & Interactions for FKBP1C Gene

SuperPathways for FKBP1C Gene

No Data Available

Interacting Proteins for FKBP1C Gene

Gene Ontology (GO) - Biological Process for FKBP1C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0061077 chaperone-mediated protein folding IBA --
genes like me logo Genes that share ontologies with FKBP1C: view

No data available for Pathways by source and SIGNOR curated interactions for FKBP1C Gene

Drugs & Compounds for FKBP1C Gene

No Compound Related Data Available

Transcripts for FKBP1C Gene

mRNA/cDNA for FKBP1C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FKBP1C Gene

No ASD Table

Relevant External Links for FKBP1C Gene

GeneLoc Exon Structure for
FKBP1C
ECgene alternative splicing isoforms for
FKBP1C

Expression for FKBP1C Gene

mRNA expression in normal human tissues for FKBP1C Gene

Protein differential expression in normal tissues from HIPED for FKBP1C Gene

This gene is overexpressed in Heart (57.4) and Brain (11.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from PaxDb for FKBP1C Gene



genes like me logo Genes that share expression patterns with FKBP1C: view

Protein tissue co-expression partners for FKBP1C Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FKBP1C Gene

Orthologs for FKBP1C Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for FKBP1C Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FKBP1A 36
  • 93 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 96 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 89 (a)
ManyToMany
-- 36
  • 74 (a)
ManyToMany
-- 36
  • 75 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Fkbp1a 36
  • 93 (a)
OneToMany
chicken
(Gallus gallus)
Aves FKBP12 36
  • 90 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 88 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii fkbp1aa 36
  • 76 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta FK506-bp2 36
  • 71 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea fkb-8 36
  • 16 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes FPR1 36
  • 53 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3865 36
  • 70 (a)
OneToMany
Species with no ortholog for FKBP1C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for FKBP1C Gene

ENSEMBL:
Gene Tree for FKBP1C (if available)
TreeFam:
Gene Tree for FKBP1C (if available)

Paralogs for FKBP1C Gene

Paralogs for FKBP1C Gene

Pseudogenes.org Pseudogenes for FKBP1C Gene

genes like me logo Genes that share paralogs with FKBP1C: view

Variants for FKBP1C Gene

Variation tolerance for FKBP1C Gene

Gene Damage Index Score: 0.56; 12.01% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FKBP1C Gene

HapMap Linkage Disequilibrium report
FKBP1C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FKBP1C Gene

Disorders for FKBP1C Gene

MalaCards: The human disease database

(1) MalaCards diseases for FKBP1C Gene - From: DISEASES

Disorder Aliases PubMed IDs
left ventricular noncompaction
  • left ventricular hypertrabeculation
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with FKBP1C: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for FKBP1C Gene

Publications for FKBP1C Gene

No publications were found for FKBP1C Gene.

Products for FKBP1C Gene

Sources for FKBP1C Gene

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