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Aliases for FKBP1C Gene

Aliases for FKBP1C Gene

  • FK506 Binding Protein 1C 2 3
  • BA184C23.2 3

External Ids for FKBP1C Gene

Summaries for FKBP1C Gene

GeneCards Summary for FKBP1C Gene

FKBP1C (FK506 Binding Protein 1C) is a Pseudogene. An important paralog of this gene is FKBP1A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FKBP1C Gene

Genomics for FKBP1C Gene

Genomic Location for FKBP1C Gene

Start:
63,211,446 bp from pter
End:
63,213,024 bp from pter
Size:
1,579 bases
Orientation:
Plus strand

Genomic View for FKBP1C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FKBP1C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FKBP1C Gene

No data available for Regulatory Elements for FKBP1C Gene

Proteins for FKBP1C Gene

  • Protein details for FKBP1C Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5VVH2-Q5VVH2
    Recommended name:
    Peptidyl-prolyl cis-trans isomerase
    Protein Accession:
    Q5VVH2
    Secondary Accessions:

    Protein attributes for FKBP1C Gene

    Size:
    108 amino acids
    Molecular mass:
    12179 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FKBP1C Gene

Proteomics data for FKBP1C Gene at MOPED

Post-translational modifications for FKBP1C Gene

  • Modification sites at PhosphoSitePlus

Other Protein References for FKBP1C Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FKBP1C Gene

Domains for FKBP1C Gene

Protein Domains for FKBP1C Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with FKBP1C: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FKBP1C Gene

Function for FKBP1C Gene

Gene Ontology (GO) - Molecular Function for FKBP1C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003755 peptidyl-prolyl cis-trans isomerase activity --
GO:0005528 FK506 binding --
GO:0019855 calcium channel inhibitor activity --
genes like me logo Genes that share ontologies with FKBP1C: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FKBP1C Gene

Localization for FKBP1C Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FKBP1C Gene COMPARTMENTS Subcellular localization image for FKBP1C gene
Compartment Confidence
cytosol 3
nucleus 2
extracellular 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for FKBP1C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005789 endoplasmic reticulum membrane --
genes like me logo Genes that share ontologies with FKBP1C: view

Pathways for FKBP1C Gene

SuperPathways for FKBP1C Gene

No Data Available

Interacting Proteins for FKBP1C Gene

Gene Ontology (GO) - Biological Process for FKBP1C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000413 protein peptidyl-prolyl isomerization --
GO:0006457 protein folding --
GO:0051280 negative regulation of release of sequestered calcium ion into cytosol --
GO:0061077 chaperone-mediated protein folding --
genes like me logo Genes that share ontologies with FKBP1C: view

No data available for Pathways by source for FKBP1C Gene

Transcripts for FKBP1C Gene

mRNA/cDNA for FKBP1C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FKBP1C Gene

No ASD Table

Relevant External Links for FKBP1C Gene

GeneLoc Exon Structure for
FKBP1C
ECgene alternative splicing isoforms for
FKBP1C

Expression for FKBP1C Gene

mRNA expression in normal human tissues for FKBP1C Gene

Integrated Proteomics: protein expression from PaxDb for FKBP1C Gene

genes like me logo Genes that share expressions with FKBP1C: view

Orthologs for FKBP1C Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for FKBP1C Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FKBP1A 37
  • 93 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 96 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Fkbp1a 37
  • 93 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 89 (a)
ManyToMany
-- 37
  • 74 (a)
ManyToMany
-- 37
  • 75 (a)
ManyToMany
chicken
(Gallus gallus)
Aves FKBP12 37
  • 90 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 88 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii fkbp1aa 37
  • 76 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta FK506-bp2 37
  • 71 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea fkb-8 37
  • 16 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes FPR1 37
  • 53 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3865 37
  • 70 (a)
OneToMany
Species with no ortholog for FKBP1C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for FKBP1C Gene

ENSEMBL:
Gene Tree for FKBP1C (if available)
TreeFam:
Gene Tree for FKBP1C (if available)

Paralogs for FKBP1C Gene

Paralogs for FKBP1C Gene

Selected SIMAP similar genes for FKBP1C Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for FKBP1C Gene

genes like me logo Genes that share paralogs with FKBP1C: view

Variants for FKBP1C Gene

Relevant External Links for FKBP1C Gene

HapMap Linkage Disequilibrium report
FKBP1C

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FKBP1C Gene

Disorders for FKBP1C Gene

No disorders were found for FKBP1C Gene.

No data available for UniProtKB/Swiss-Prot for FKBP1C Gene

Publications for FKBP1C Gene

No publications were found for FKBP1C Gene.

Products for FKBP1C Gene

Sources for FKBP1C Gene

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