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Aliases for FKBP1A-SDCBP2 Gene

Subcategory (RNA class) for FKBP1A-SDCBP2 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for FKBP1A-SDCBP2 Gene

  • FKBP1A-SDCBP2 Readthrough (NMD Candidate) 2 3

External Ids for FKBP1A-SDCBP2 Gene

Previous GeneCards Identifiers for FKBP1A-SDCBP2 Gene

  • GC20U900632
  • GC20P001308

Summaries for FKBP1A-SDCBP2 Gene

Entrez Gene Summary for FKBP1A-SDCBP2 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring FK506 binding protein 1A, 12kDa and syndecan binding protein (syntenin) 2 genes on chromosome 20. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product. [provided by RefSeq, Dec 2010]

GeneCards Summary for FKBP1A-SDCBP2 Gene

FKBP1A-SDCBP2 (FKBP1A-SDCBP2 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FKBP1A-SDCBP2 Gene

Genomics for FKBP1A-SDCBP2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for FKBP1A-SDCBP2 Gene

Chromosome:
20
Start:
1,309,909 bp from pter
End:
1,393,172 bp from pter
Size:
83,264 bases
Orientation:
Minus strand

Genomic View for FKBP1A-SDCBP2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for FKBP1A-SDCBP2 Gene

No data available for Regulatory Elements for FKBP1A-SDCBP2 Gene

Proteins for FKBP1A-SDCBP2 Gene

Post-translational modifications for FKBP1A-SDCBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FKBP1A-SDCBP2 Gene

Domains & Families for FKBP1A-SDCBP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FKBP1A-SDCBP2 Gene

Function for FKBP1A-SDCBP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FKBP1A-SDCBP2 Gene

Localization for FKBP1A-SDCBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FKBP1A-SDCBP2 Gene

Pathways & Interactions for FKBP1A-SDCBP2 Gene

SuperPathways for FKBP1A-SDCBP2 Gene

No Data Available

Interacting Proteins for FKBP1A-SDCBP2 Gene

Gene Ontology (GO) - Biological Process for FKBP1A-SDCBP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FKBP1A-SDCBP2 Gene

Drugs & Compounds for FKBP1A-SDCBP2 Gene

No Compound Related Data Available

Transcripts for FKBP1A-SDCBP2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FKBP1A-SDCBP2 Gene

No ASD Table

Relevant External Links for FKBP1A-SDCBP2 Gene

GeneLoc Exon Structure for
FKBP1A-SDCBP2
ECgene alternative splicing isoforms for
FKBP1A-SDCBP2

No data available for mRNA/cDNA for FKBP1A-SDCBP2 Gene

Expression for FKBP1A-SDCBP2 Gene

mRNA expression in normal human tissues for FKBP1A-SDCBP2 Gene

mRNA expression in normal human tissues for FKBP1A-SDCBP2 Gene
genes like me logo Genes that share expression patterns with FKBP1A-SDCBP2: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FKBP1A-SDCBP2 Gene

Orthologs for FKBP1A-SDCBP2 Gene

No data available for Orthologs and Evolution for FKBP1A-SDCBP2 Gene

Paralogs for FKBP1A-SDCBP2 Gene

No data available for Paralogs for FKBP1A-SDCBP2 Gene

Variants for FKBP1A-SDCBP2 Gene

Structural Variations from Database of Genomic Variants (DGV) for FKBP1A-SDCBP2 Gene

Variant ID Type Subtype PubMed ID
dgv4514n71 CNV Loss 21882294
nsv912590 CNV Loss 21882294
dgv4515n71 CNV Loss 21882294
nsv912595 CNV Loss 21882294
nsv518295 CNV Loss 19592680
esv2664030 CNV Deletion 23128226
nsv522008 CNV Gain 19592680

Relevant External Links for FKBP1A-SDCBP2 Gene

HapMap Linkage Disequilibrium report
FKBP1A-SDCBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for FKBP1A-SDCBP2 Gene

Disorders for FKBP1A-SDCBP2 Gene

Relevant External Links for FKBP1A-SDCBP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FKBP1A-SDCBP2
genes like me logo Genes that share disorders with FKBP1A-SDCBP2: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FKBP1A-SDCBP2 Gene

Publications for FKBP1A-SDCBP2 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 67

Products for FKBP1A-SDCBP2 Gene

Sources for FKBP1A-SDCBP2 Gene

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