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Aliases for FIS1 Gene

Aliases for FIS1 Gene

  • Fission, Mitochondrial 1 2 3 5
  • Tetratricopeptide Repeat Protein 11 3 4
  • Tetratricopeptide Repeat Domain 11 2 3
  • Mitochondrial Fission Molecule 2 3
  • TPR Repeat Protein 11 3 4
  • FIS1 Homolog 3 4
  • TTC11 3 4
  • HFis1 3 4
  • Fission 1 (Mitochondrial Outer Membrane) Homolog (S. Cerevisiae) 2
  • Fission 1 (Mitochondrial Outer Membrane) Homolog (Yeast) 2
  • Fission 1 (Mitochondrial Outer Membrane) Homolog 3
  • Mitochondrial Fission 1 Protein 3
  • CGI-135 Protein 2
  • H_NH0132A01.6 3
  • CGI-135 3

External Ids for FIS1 Gene

Previous HGNC Symbols for FIS1 Gene

  • TTC11

Previous GeneCards Identifiers for FIS1 Gene

  • GC07M100477
  • GC07M100665
  • GC07M100882
  • GC07M095475

Summaries for FIS1 Gene

Entrez Gene Summary for FIS1 Gene

  • The balance between fission and fusion regulates the morphology of mitochondria. TTC11 is a component of a mitochondrial complex that promotes mitochondrial fission (James et al., 2003 [PubMed 12783892]).[supplied by OMIM, Mar 2008]

GeneCards Summary for FIS1 Gene

FIS1 (Fission, Mitochondrial 1) is a Protein Coding gene. Diseases associated with FIS1 include Spinocerebellar Ataxia 12 and Optic Atrophy Plus Syndrome. Among its related pathways are Mitophagy - animal. GO annotations related to this gene include receptor binding.

UniProtKB/Swiss-Prot for FIS1 Gene

  • Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. Plays a minor role in the recruitment and association of the fission mediator dynamin-related protein 1 (DNM1L) to the mitochondrial surface and mitochondrial fission. Can induce cytochrome c release from the mitochondrion to the cytosol, ultimately leading to apoptosis. Also mediates peroxisomal fission.

Gene Wiki entry for FIS1 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FIS1 Gene

Genomics for FIS1 Gene

Regulatory Elements for FIS1 Gene

Enhancers for FIS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G101215 1.4 ENCODE dbSUPER 55.4 +34.1 34133 4.7 PKNOX1 CREB3L1 ARNT AGO1 ARID4B SIN3A ZNF2 YY1 ZNF143 FOS FIS1 GIGYF1 PPP1R35 NAT16 STAG3L5P EPHB4 PCOLCE CLDN15 ZNHIT1 AP1S1
GH07G101231 1.7 Ensembl ENCODE dbSUPER 45.5 +15.5 15480 10.7 CREB3L1 MLX AGO1 ZFP64 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 FIS1 GIGYF1 STAG3L5P PPP1R35 PCOLCE MEPCE CLDN15 EPHB4 LOC101927746 ZNHIT1
GH07G101243 1.4 ENCODE dbSUPER 45.6 +7.8 7799 2.5 HDGF PKNOX1 FOXA2 CREB3L1 ARNT AGO1 ZFP64 ARID4B SIN3A DMAP1 FIS1 AGFG2 CLDN15 GC07M101250
GH07G101251 1.4 ENCODE dbSUPER 41.4 +0.2 209 1.8 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 FIS1 GIGYF1 STAG3L5P PPP1R35 PCOLCE-AS1 EPHB4 PCOLCE CLDN15 GC07M101250
GH07G101159 1.6 Ensembl ENCODE dbSUPER 10.8 +90.2 90223 5.5 HDGF PKNOX1 ARNT AGO1 SIN3A ARID4B YBX1 ZNF766 ZNF143 FOS AP1S1 NYAP1 NAT16 GIGYF1 PPP1R35 FIS1 STAG3L5P AZGP1P2 LNCPRESS1 EPHB4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FIS1 on UCSC Golden Path with GeneCards custom track

Promoters for FIS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000215924 116 1601 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1

Genomic Location for FIS1 Gene

Chromosome:
7
Start:
101,239,458 bp from pter
End:
101,252,316 bp from pter
Size:
12,859 bases
Orientation:
Minus strand

Genomic View for FIS1 Gene

Genes around FIS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FIS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FIS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FIS1 Gene

Proteins for FIS1 Gene

  • Protein details for FIS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y3D6-FIS1_HUMAN
    Recommended name:
    Mitochondrial fission 1 protein
    Protein Accession:
    Q9Y3D6
    Secondary Accessions:
    • Q9BTP3

    Protein attributes for FIS1 Gene

    Size:
    152 amino acids
    Molecular mass:
    16938 Da
    Quaternary structure:
    • Interacts with DNM1L/DLP1 through the TPR region. Interacts with MARCH5. Interacts with MIEF1. Interacts with PEX11A, PEX11B and PEX11G (PubMed:20826455).

    Three dimensional structures from OCA and Proteopedia for FIS1 Gene

neXtProt entry for FIS1 Gene

Post-translational modifications for FIS1 Gene

Other Protein References for FIS1 Gene

No data available for DME Specific Peptides for FIS1 Gene

Domains & Families for FIS1 Gene

Gene Families for FIS1 Gene

Protein Domains for FIS1 Gene

Suggested Antigen Peptide Sequences for FIS1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9Y3D6

UniProtKB/Swiss-Prot:

FIS1_HUMAN :
  • The C-terminus is required for mitochondrial or peroxisomal localization, while the N-terminus is necessary for mitochondrial or peroxisomal fission, localization and regulation of the interaction with DNM1L.
  • Belongs to the FIS1 family.
Domain:
  • The C-terminus is required for mitochondrial or peroxisomal localization, while the N-terminus is necessary for mitochondrial or peroxisomal fission, localization and regulation of the interaction with DNM1L.
Family:
  • Belongs to the FIS1 family.
genes like me logo Genes that share domains with FIS1: view

Function for FIS1 Gene

Molecular function for FIS1 Gene

UniProtKB/Swiss-Prot Function:
Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. Plays a minor role in the recruitment and association of the fission mediator dynamin-related protein 1 (DNM1L) to the mitochondrial surface and mitochondrial fission. Can induce cytochrome c release from the mitochondrion to the cytosol, ultimately leading to apoptosis. Also mediates peroxisomal fission.

Gene Ontology (GO) - Molecular Function for FIS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005102 receptor binding IPI 20178365
GO:0005515 protein binding IPI 12861026
GO:0032403 protein complex binding IEA --
genes like me logo Genes that share ontologies with FIS1: view
genes like me logo Genes that share phenotypes with FIS1: view

Animal Model Products

CRISPR Products

miRNA for FIS1 Gene

miRTarBase miRNAs that target FIS1

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for FIS1

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FIS1 Gene

Localization for FIS1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FIS1 Gene

Mitochondrion outer membrane; Single-pass membrane protein. Peroxisome membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FIS1 gene
Compartment Confidence
mitochondrion 5
peroxisome 5
endoplasmic reticulum 3
cytosol 2
extracellular 1
nucleus 1
lysosome 1

Gene Ontology (GO) - Cellular Components for FIS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA,IDA 17408615
GO:0005741 mitochondrial outer membrane IEA --
GO:0005777 peroxisome ISS 14561759
GO:0005778 peroxisomal membrane IEA --
GO:0005779 integral component of peroxisomal membrane IDA 16107562
genes like me logo Genes that share ontologies with FIS1: view

Pathways & Interactions for FIS1 Gene

SuperPathway Contained pathways
1 Mitophagy - animal
genes like me logo Genes that share pathways with FIS1: view

Pathways by source for FIS1 Gene

1 KEGG pathway for FIS1 Gene

Gene Ontology (GO) - Biological Process for FIS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000266 mitochondrial fission IMP 19864424
GO:0000422 mitophagy IDA 18515060
GO:0001836 release of cytochrome c from mitochondria IMP 19864424
GO:0006626 protein targeting to mitochondrion IMP 18845145
GO:0006915 apoptotic process IEA --
genes like me logo Genes that share ontologies with FIS1: view

No data available for SIGNOR curated interactions for FIS1 Gene

Drugs & Compounds for FIS1 Gene

(1) Additional Compounds for FIS1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with FIS1: view

Transcripts for FIS1 Gene

Unigene Clusters for FIS1 Gene

Fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae):
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for FIS1

Alternative Splicing Database (ASD) splice patterns (SP) for FIS1 Gene

No ASD Table

Relevant External Links for FIS1 Gene

GeneLoc Exon Structure for
FIS1
ECgene alternative splicing isoforms for
FIS1

Expression for FIS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FIS1 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for FIS1 Gene



Protein tissue co-expression partners for FIS1 Gene

NURSA nuclear receptor signaling pathways regulating expression of FIS1 Gene:

FIS1

SOURCE GeneReport for Unigene cluster for FIS1 Gene:

Hs.423968

Evidence on tissue expression from TISSUES for FIS1 Gene

  • Liver(4.4)
  • Pancreas(4.4)
  • Nervous system(3.8)
  • Muscle(3.6)
  • Heart(2.8)
  • Kidney(2.3)
  • Adrenal gland(2)
  • Thyroid gland(2)
genes like me logo Genes that share expression patterns with FIS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for FIS1 Gene

Orthologs for FIS1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for FIS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FIS1 34 35
  • 100 (n)
cow
(Bos Taurus)
Mammalia FIS1 34 35
  • 93.2 (n)
dog
(Canis familiaris)
Mammalia FIS1 34 35
  • 92.11 (n)
oppossum
(Monodelphis domestica)
Mammalia FIS1 35
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fis1 34
  • 89.46 (n)
mouse
(Mus musculus)
Mammalia Fis1 34 16 35
  • 89.04 (n)
lizard
(Anolis carolinensis)
Reptilia FIS1 35
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fis1 34
  • 72.41 (n)
Str.10685 34
zebrafish
(Danio rerio)
Actinopterygii FIS1 35
  • 66 (a)
OneToOne
im:6905231 34
  • 64.43 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009852 34
  • 56.37 (n)
fruit fly
(Drosophila melanogaster)
Insecta Fis1 34 35
  • 53.38 (n)
worm
(Caenorhabditis elegans)
Secernentea fis-2 34 35
  • 48.95 (n)
fis-1 35
  • 39 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes FIS1 35 37
  • 25 (a)
OneToOne
Species where no ortholog for FIS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for FIS1 Gene

ENSEMBL:
Gene Tree for FIS1 (if available)
TreeFam:
Gene Tree for FIS1 (if available)

Paralogs for FIS1 Gene

Pseudogenes.org Pseudogenes for FIS1 Gene

genes like me logo Genes that share paralogs with FIS1: view

No data available for Paralogs for FIS1 Gene

Variants for FIS1 Gene

Sequence variations from dbSNP and Humsavar for FIS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000034776 -- 101,243,397(+) ATGGT(A/G)AAACC intron-variant
rs1000310810 -- 101,246,796(+) CCCAG(C/G)CAAGC upstream-variant-2KB
rs1000444470 -- 101,241,523(+) TGTAC(A/G)ATTAT intron-variant
rs1001297008 -- 101,245,295(+) GGCCA(A/T)GTCTT upstream-variant-2KB
rs1001709686 -- 101,244,885(+) GGAGG(C/G)TTCGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FIS1 Gene

Variant ID Type Subtype PubMed ID
esv2422326 CNV duplication 17116639
esv2422376 CNV duplication 17116639
esv2734888 CNV deletion 23290073
esv2752134 CNV gain 17911159
esv3614318 CNV loss 21293372
esv3614319 CNV gain 21293372
esv3614323 CNV loss 21293372
esv3614324 CNV gain 21293372
nsv1030604 CNV gain 25217958
nsv5875 CNV insertion 18451855
nsv607974 CNV loss 21841781
nsv607978 CNV loss 21841781
nsv831075 CNV loss 17160897
nsv831076 CNV loss 17160897
nsv831077 CNV loss 17160897

Variation tolerance for FIS1 Gene

Residual Variation Intolerance Score: 76.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.40; 63.66% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FIS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FIS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FIS1 Gene

Disorders for FIS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for FIS1 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
spinocerebellar ataxia 12
  • spinocerebellar ataxia type 12
optic atrophy plus syndrome
  • optic atrophy
charcot-marie-tooth disease, axonal, type 2k
  • charcot-marie-tooth disease, axonal, with vocal cord paresis
- elite association - COSMIC cancer census association via MalaCards
Search FIS1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for FIS1

Genetic Association Database (GAD)
FIS1
Human Genome Epidemiology (HuGE) Navigator
FIS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FIS1
genes like me logo Genes that share disorders with FIS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for FIS1 Gene

Publications for FIS1 Gene

  1. Levels of human Fis1 at the mitochondrial outer membrane regulate mitochondrial morphology. (PMID: 14996942) Stojanovski D. … Ryan M.T. (J. Cell Sci. 2004) 2 3 4 64
  2. The solution structure of human mitochondria fission protein Fis1 reveals a novel TPR-like helix bundle. (PMID: 14623186) Suzuki M. … Tjandra N. (J. Mol. Biol. 2003) 3 4 22 64
  3. Fis1, Mff, MiD49, and MiD51 mediate Drp1 recruitment in mitochondrial fission. (PMID: 23283981) LosA^n O.C. … Chan D.C. (Mol. Biol. Cell 2013) 3 4 64
  4. MiD49 and MiD51 can act independently of Mff and Fis1 in Drp1 recruitment and are specific for mitochondrial fission. (PMID: 23921378) Palmer C.S. … Ryan M.T. (J. Biol. Chem. 2013) 3 4 64
  5. Human MIEF1 recruits Drp1 to mitochondrial outer membranes and promotes mitochondrial fusion rather than fission. (PMID: 21701560) Zhao J. … Nister M. (EMBO J. 2011) 3 4 64

Products for FIS1 Gene

  • Addgene plasmids for FIS1

Sources for FIS1 Gene

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