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Aliases & Descriptions for FHL2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases AAG11 2 DRAL 1 , 2 , 3 , 5 FHL-2 3 SLIM3 1 , 2 , 3
Descriptions LIM domain protein DRAL 3 SLIM 3 3 Skeletal muscle LIM-protein 3 3 aging-associated gene 11 2 down-regulated in rhabdomyosarcoma LIM protein 2 four and a half LIM domains 2 2 four and a half LIM-domain protein 2 2
Search outside databases for aliases for FHL2 genePrevious GC identifers: GC02M103841 GC02M104429 GC02M105574 GC02M105598 GC02M105590 GC02M105435
Summaries for FHL2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for FHL2 : LIM proteins contain a highly conserved double zinc finger motif called the LIM domain.[supplied byOMIM] UniProtKB/Swiss-Prot: FHL2_HUMAN, Q14192 Function : May function as a molecular transmitter linking various signaling pathways totranscriptional regulation. Negatively regulates the transcriptional repressor E4F1 and mayfunction in cell growth
Gene Wiki entry for FHL2
Genomic Location for FHL2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the FHL2 gene Entrez Gene cytogenetic band: 2q12-q14 Ensembl cytogenetic band: 2q12.2 HGNC cytogenetic band: 2q12.2 FHL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M105343:
(about GC identifiers )
Start:
105,340,601 bp from pter
End:
105,421,392 bp from pter
Size:
80,792 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000002.10 NT_022171.14 Proteins for FHL2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: FHL2_HUMAN, Q14192 (See
protein sequence )Recommended Name: Four and a half LIM domains protein 2 Size : 279 amino acids; 32193 Da
Subunit : Interacts with ZNF638 and TTN/titin. Interacts with E4F1
Subcellular location : Cytoplasm. Nucleus
PDB structures from and Proteopedia : 1X4K (3D)
 1X4L (3D)
 2D8Z (3D)
 
Secondary accessions : Q13229 Q13644 Q9P294
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_001034581.1 NP_001441.4 NP_963849.1 NP_963851.2 ENSEMBL proteins: ENSP00000338270 ENSP00000386633 ENSP00000386665 ENSP00000386892 ENSP00000350846 ENSP00000322909 ENSP00000377020 ENSP00000344266 ENSP00000377021 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: FHL2 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for FHL2: Assays for FHL2:
Protein
Domains/ Families for FHL2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q14192 ProtoNet protein and cluster: Q14192
1 Blocks protein family : IPB001781 Zn-binding protein UniProtKB/Swiss-Prot: FHL2_HUMAN, Q14192 Domain : The third LIM zinc-binding mediates interaction with E4F1Similarity : Contains 4 LIM zinc-binding domains
Gene Function for FHL2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_001039492 Applied Biosystems Silencer ® siRNAs for FHL2 Sigma-Aldrich siRNA for FHL2 Sigma-Aldrich shRNA for FHL2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001039492                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001039492                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_001039492  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001450 UniProtKB/Swiss-Prot: FHL2_HUMAN, Q14192 Function : May function as a molecular transmitter linking various signaling pathways totranscriptional regulation. Negatively regulates the transcriptional repressor E4F1 and mayfunction in cell growth
Genatlas biochemistry entry for FHL2 :four and a half LIM domain protein 2,heart specific form,tissue specific coactivator of theandrogen receptor,downregulated in rhabdomyosarcoma
3 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Fhl2) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for FHL2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for FHL2 5/66 Interacting proteins for FHL2 (Q14192 1 , 2 ENSP00000344266 3 ) via UniProtKB, MINT, and/or STRING (see all 66
)About this table 5 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for FHL2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for FHL2 2 Novoseek chemical compound relationships for FHL2 gene
About this table 1 PharmGKB drug compound relationship for FHL2 gene
Drug compound
PharmGKB Relations
PubMed IDs for articles supporting these relationships
antiarrhythmics FA  12237170
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Transcripts for FHL2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_001039492 Sigma-Aldrich siRNA for FHL2 Sigma-Aldrich shRNA for FHL2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001039492 NM_001450 NM_201555 NM_201557
REFSEQ mRNAs for FHL2 gene (4 alternative transcripts): NM_001039492.2 NM_001450.3 NM_201555.1 NM_201557.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001039492 NM_001450 NM_201555 NM_201557
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001039492                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001039492                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_001039492  
Additional cDNA sequence: AB158503.1 AK097756.1 AK313841.1 AY634685.1 BC012742.2 BC014397.1 BC093049.1 BT006960.1 CR457437.1 CR594847.1 CR595150.1 CR604413.1 CR605289.1 CR606106.1 CR608826.1 CR615688.1 CR615852.1 CR616017.1 CR617985.1 CR623221.1 CR624743.1 CR624937.1 CR626389.1 CR626700.1 CR936682.1 CR936799.1 DQ266432.1 DQ307067.1 L42176.1 U29332.1 U60117.1
22 DOTS entries : DT.100827711 DT.100770543 DT.100827708 DT.100827720 DT.315605 DT.95120234 DT.100827721 DT.100771253 DT.95114047 DT.121011322 DT.100827712 DT.121011340 DT.86838184 DT.97825801 DT.97848418 DT.121011330 DT.121011374 DT.40107456 DT.40132449 DT.40132450 DT.95154699 DT.121011391
24/305 AceView cDNA sequences (see all 305
):CR617985 CR626700 AJ709258 NM_201556 BU624620 BI821099 AW950172 CR615852 NM_201555 BX116006 AI918076 BX446510 BQ671167 CR615688 AW069447 BF221639 L42176 AI620458 NM_001450 CR606106 AI873832 BQ691655 AI357956 BM739390
highest scoring ESTs for FHL2 :U29332 AA249230 BI829702 BI836901 CF552311 N56433 N88051 R57165 AA083419 AA092085
Unigene Cluster for FHL2: Four and a half LIM domains 2 Hs.443687 [show with all ESTs ] Unigene Representative Sequence: CR936799 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for FHL2 (see all 13
) ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3a · 3b · 3c · 3d ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b ^ 9 ^ 10 ^ 11a · 11b · 11c · 11d SP1 :                   -     -       -                   SP2 :                   -     -   -     -                   SP3 :                 -   -     -   -     -                   SP4 :                 -   -   -   -   -     -                   SP5 :                   -     -   -     -   -   -              
About this scheme ECgene alternative splicing isoforms for FHL2 9 Ensembl transcripts including schematic representations : ENST00000336660
ENST00000408995
ENST00000409807
ENST00000409177
ENST00000358129
ENST00000322142
ENST00000393352
ENST00000344213
ENST00000393353
Expression for FHL2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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FHL2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for FHL2 1 / 2 / 3
3 probe-sets matching FHL2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CAGTGCGTTCSOURCE GeneReport for Unigene cluster: Hs.443687 Expression variation in blood from EXPOLDB for FHL2
UniProtKB/Swiss-Prot: FHL2_HUMAN, Q14192 Tissue specificity : Expressed in skeletal muscle and heart
Orthologs for FHL2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for FHL2 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for FHL2 ENSEMBL Gene Tree for FHL2 Paralogs for FHL2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for FHL2 gene FHL5 2 FHL1 2 FHL3 2
SNPs/Variants for FHL2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for FHL2 (up to first 250kb)
Disorders & Mutations for FHL2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602633 7 Novoseek disease relationships for FHL2 gene
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
familial hemophagocytic lymphohistiocytosis
89.24
3
15632205 (1), 16778144 (1), 16365863 (1)
prostate cancer
16.68
9
15948728 (2), 17975004 (2), 17145880 (2)
cancer
15.95
18
17352216 (5), 17682292 (2), 10649446 (2), 19015043 (1) (see all 7 )
tumors
14.45
11
16378916 (6), 10873680 (1), 15161045 (1), 18252802 (1) (see all 5 )
osteosarcoma
13.17
1
16311053 (1)
melanoma
0.00
2
14583455 (2)
breast cancer
0.00
15
17682292 (6), 16378916 (5), 14550570 (1)
About this table 1 PharmGKB disease relationship for FHL2 gene About this table
Medical News for FHL2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for FHL2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/97 PubMed articles for FHL2 gene (see all 97
): Slim defines a novel family of LIM-proteins expressed in skeletal muscle. (PubMed id 8753811) 1, 2, 3, 4 Morgan M.J. and Madgwick A.J.A. (1996) Alzheimer's disease-associated presenilin 2 interacts with DRAL, an LIM-domain protein. (PubMed id 11001931) 1, 3, 4 Tanahashi H. and Tabira T. (2000) Interaction of the heart-specific LIM domain protein, FHL2, with DNA- binding nuclear protein, hNP220. (PubMed id 11813260) 1, 3, 4 Ng E.K.O.... Fung K.P. (2002) Molecular cloning and characterization of FHL2, a novel LIM domain protein preferentially expressed in human heart. (PubMed id 9573400) 1, 3, 4 Chan K.K.... Lee C.Y. (1998) The LIM-only protein FHL2 is a negative regulator of E4F1. (PubMed id 16652157) 3, 4 Paul C....Sardet C. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Subcellular targeting of metabolic enzymes to titin in heart muscle may be mediated by DRAL/FHL-2. (PubMed id 12432079) 3, 4 Lange S.... Ehler E. (2002) Subtractive cloning and characterization of DRAL, a novel LIM-domain protein down-regulated in rhabdomyosarcoma. (PubMed id 9150430) 3, 4 Genini M....Schaefer B.W. (1997) FHL2 regulates cell cycle-dependent and doxorubicin-induced p21Cip1/Waf1 expression in breast cancer cells. (PubMed id 17682292) 1, 3 Martin B.T....Strebhardt K. (2007) Expression of the transcriptional coregulator FHL2 in human breast cancer: a clinicopathologic study. (PubMed id 16378916) 1, 3 Gabriel B....Hasenburg A. (2006)
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Genome Databases showing FHL2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing FHL2
(According to HUGE )
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Specialized Databases showing FHL2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for FHL2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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