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Aliases for FHDC1 Gene

Aliases for FHDC1 Gene

  • FH2 Domain Containing 1 2 3 5
  • KIAA1727 4

External Ids for FHDC1 Gene

Previous GeneCards Identifiers for FHDC1 Gene

  • GC04P154084
  • GC04P153864
  • GC04P149590
  • GC04P152936

Summaries for FHDC1 Gene

GeneCards Summary for FHDC1 Gene

FHDC1 (FH2 Domain Containing 1) is a Protein Coding gene. An important paralog of this gene is INF2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FHDC1 Gene

Genomics for FHDC1 Gene

Regulatory Elements for FHDC1 Gene

Enhancers for FHDC1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F152953 1.6 FANTOM5 Ensembl ENCODE 22.4 +45.1 45133 5.6 RARA TEAD3 FOXK2 GATA2 HNF4G NR2F6 HES1 SP5 RNF2 BHLHE40 FHDC1 RNF175 ARFIP1 TRIM2 PIR52121 GC04P152944
GH04F153079 0.6 FANTOM5 19.1 +168.6 168562 0.4 ATF3 TAL1 NR4A1 TRIM24 ZIC2 FHDC1 KIAA0922 GC04P153070 GC04P153071 TRIM2
GH04F152961 0.2 ENCODE 11.6 +49.8 49823 0.5 ZNF316 NR2F2 FHDC1 MIR4453 PIR52121 GC04P152944
GH04F152962 0.4 ENCODE 11.6 +50.3 50254 0.2 ARID1B RNF2 SMARCA4 MTA2 NCOR1 TAL1 CEBPB EP300 NR2F2 FHDC1 PIR52121 GC04P152944
GH04F152979 0.4 ENCODE 11.5 +70.6 70646 5.2 MIER1 MAFG MIER2 REST ZIC2 ZFHX2 ZNF316 NFE2 MAFK EMSY FHDC1 PIR52121 ENSG00000249022
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FHDC1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FHDC1 Gene

152,911,570 bp from pter
152,979,696 bp from pter
68,127 bases
Plus strand

Genomic View for FHDC1 Gene

Genes around FHDC1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FHDC1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FHDC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FHDC1 Gene

Proteins for FHDC1 Gene

  • Protein details for FHDC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    FH2 domain-containing protein 1
    Protein Accession:

    Protein attributes for FHDC1 Gene

    1143 amino acids
    Molecular mass:
    124762 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FHDC1 Gene

Post-translational modifications for FHDC1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FHDC1 Gene

No data available for DME Specific Peptides for FHDC1 Gene

Domains & Families for FHDC1 Gene

Protein Domains for FHDC1 Gene


Suggested Antigen Peptide Sequences for FHDC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 FH2 (formin homology 2) domain.
  • Contains 1 FH2 (formin homology 2) domain.
genes like me logo Genes that share domains with FHDC1: view

No data available for Gene Families for FHDC1 Gene

Function for FHDC1 Gene

Phenotypes for FHDC1 Gene

genes like me logo Genes that share phenotypes with FHDC1: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FHDC1 Gene

Localization for FHDC1 Gene

Subcellular locations from

Jensen Localization Image for FHDC1 Gene COMPARTMENTS Subcellular localization image for FHDC1 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FHDC1 Gene

Pathways & Interactions for FHDC1 Gene

SuperPathways for FHDC1 Gene

No Data Available

Interacting Proteins for FHDC1 Gene

Gene Ontology (GO) - Biological Process for FHDC1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FHDC1 Gene

Transcripts for FHDC1 Gene

mRNA/cDNA for FHDC1 Gene

Unigene Clusters for FHDC1 Gene

FH2 domain containing 1:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FHDC1 Gene

No ASD Table

Relevant External Links for FHDC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FHDC1 Gene

mRNA expression in normal human tissues for FHDC1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FHDC1 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.7), Skin - Not Sun Exposed (Suprapubic) (x4.4), and Thyroid (x4.0).

Protein differential expression in normal tissues from HIPED for FHDC1 Gene

This gene is overexpressed in Cervix (31.7), Breast (23.7), and Peripheral blood mononuclear cells (11.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for FHDC1 Gene

Protein tissue co-expression partners for FHDC1 Gene

NURSA nuclear receptor signaling pathways regulating expression of FHDC1 Gene:


SOURCE GeneReport for Unigene cluster for FHDC1 Gene:

genes like me logo Genes that share expression patterns with FHDC1: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for FHDC1 Gene

Orthologs for FHDC1 Gene

This gene was present in the common ancestor of animals.

Orthologs for FHDC1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia FHDC1 34 35
  • 99.07 (n)
(Canis familiaris)
Mammalia FHDC1 34 35
  • 80.97 (n)
(Rattus norvegicus)
Mammalia Fhdc1 34
  • 76.69 (n)
(Mus musculus)
Mammalia Fhdc1 34 16 35
  • 76.09 (n)
(Bos Taurus)
Mammalia FHDC1 34 35
  • 75.54 (n)
(Ornithorhynchus anatinus)
Mammalia FHDC1 35
  • 63 (a)
(Monodelphis domestica)
Mammalia FHDC1 35
  • 60 (a)
(Gallus gallus)
Aves FHDC1 34 35
  • 60.29 (n)
(Anolis carolinensis)
Reptilia FHDC1 35
  • 50 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia fhdc1 34
  • 55.26 (n)
(Danio rerio)
Actinopterygii fhdc1 34 35
  • 50.51 (n)
fruit fly
(Drosophila melanogaster)
Insecta form3 35
  • 19 (a)
Species where no ortholog for FHDC1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FHDC1 Gene

Gene Tree for FHDC1 (if available)
Gene Tree for FHDC1 (if available)

Paralogs for FHDC1 Gene

Paralogs for FHDC1 Gene

genes like me logo Genes that share paralogs with FHDC1: view

Variants for FHDC1 Gene

Sequence variations from dbSNP and Humsavar for FHDC1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10008050 -- 152,969,494(+) CAAGA(C/T)TAAAA intron-variant
rs10008159 -- 152,969,641(+) TTAAC(C/T)CTTTA intron-variant
rs10011789 -- 152,957,929(+) CCACC(A/G)CGCCT intron-variant
rs10020165 -- 152,971,704(+) GACCC(A/G)TCAGA intron-variant
rs10025783 -- 152,915,163(+) CTAGA(C/T)ATTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FHDC1 Gene

Variant ID Type Subtype PubMed ID
nsv461691 CNV loss 19166990
nsv509019 CNV insertion 20534489
nsv595745 CNV loss 21841781
nsv830117 CNV gain 17160897

Variation tolerance for FHDC1 Gene

Residual Variation Intolerance Score: 97.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 16.31; 97.66% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FHDC1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FHDC1 Gene

Disorders for FHDC1 Gene

Relevant External Links for FHDC1

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FHDC1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FHDC1 Gene

Publications for FHDC1 Gene

  1. Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PMID: 17362836) Schymick J.C. … Traynor B.J. (Lancet Neurol 2007) 3 46 64
  2. Identification and characterization of human FHDC1, mouse Fhdc1 and zebrafish fhdc1 genes in silico. (PMID: 15138637) Katoh M. … Katoh M. (Int. J. Mol. Med. 2004) 2 3 64
  3. Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 11214970) Nagase T. … Ohara O. (DNA Res. 2000) 3 4 64
  4. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64
  5. Diagnostic exome sequencing in persons with severe intellectual disability. (PMID: 23033978) de Ligt J. … Vissers L.E. (N. Engl. J. Med. 2012) 4 64

Products for FHDC1 Gene

Sources for FHDC1 Gene

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