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Aliases for FGFR2 Gene

Aliases for FGFR2 Gene

  • Fibroblast Growth Factor Receptor 2 2 3 5
  • Keratinocyte Growth Factor Receptor 2 3 4
  • Bacteria-Expressed Kinase 2 3
  • EC 2.7.10.1 4 61
  • K-SAM 3 4
  • KGFR 3 4
  • BEK 3 4
  • Protein Tyrosine Kinase, Receptor Like 14 3
  • BEK Fibroblast Growth Factor Receptor 3
  • Craniofacial Dysostosis 1 2
  • Jackson-Weiss Syndrome 2
  • Pfeiffer Syndrome 2
  • Crouzon Syndrome 2
  • CD332 Antigen 4
  • EC 2.7.10 61
  • FGFR-2 4
  • BFR-1 3
  • CD332 3
  • BBDS 3
  • CEK3 3
  • ECT1 3
  • TK14 3
  • TK25 3
  • CFD1 3
  • KSAM 4
  • JWS 3

External Ids for FGFR2 Gene

Previous HGNC Symbols for FGFR2 Gene

  • KGFR
  • BEK
  • CFD1
  • JWS

Previous GeneCards Identifiers for FGFR2 Gene

  • GC10M122481
  • GC10M123369
  • GC10M122902
  • GC10M122147
  • GC10M122473
  • GC10M123223
  • GC10M116868

Summaries for FGFR2 Gene

Entrez Gene Summary for FGFR2 Gene

  • The protein encoded by this gene is a member of the fibroblast growth factor receptor family, where amino acid sequence is highly conserved between members and throughout evolution. FGFR family members differ from one another in their ligand affinities and tissue distribution. A full-length representative protein consists of an extracellular region, composed of three immunoglobulin-like domains, a single hydrophobic membrane-spanning segment and a cytoplasmic tyrosine kinase domain. The extracellular portion of the protein interacts with fibroblast growth factors, setting in motion a cascade of downstream signals, ultimately influencing mitogenesis and differentiation. This particular family member is a high-affinity receptor for acidic, basic and/or keratinocyte growth factor, depending on the isoform. Mutations in this gene are associated with Crouzon syndrome, Pfeiffer syndrome, Craniosynostosis, Apert syndrome, Jackson-Weiss syndrome, Beare-Stevenson cutis gyrata syndrome, Saethre-Chotzen syndrome, and syndromic craniosynostosis. Multiple alternatively spliced transcript variants encoding different isoforms have been noted for this gene. [provided by RefSeq, Jan 2009]

CIViC summary for FGFR2 Gene

  • The FGFR proteins are involved in a wide array of pathways known to play a signficant role in cancer. Activation of these receptors can lead to activation of the RAS-MAPK pathway and the PI3K-AKT pathway, among others. The mechanisms by which FGFR can be misregulated vary between cancers. Amplification of the receptors has been observed in lung and breast cancers, coding mutations and deletions have been seen in many cancers, and more recently, FGFR fusions that lead to pathway actiation have been demonstrated to have oncogenic potential across multiple cancer types. The targeted therapeutics ponatinib, dovitinib and pazopanib have seen success in treating over-active FGFR signalling, prompting use of diagnostic sequencing targeting the FGFR genes, especially in lung cancer patients.

GeneCards Summary for FGFR2 Gene

FGFR2 (Fibroblast Growth Factor Receptor 2) is a Protein Coding gene. Diseases associated with FGFR2 include Crouzon Syndrome and Jackson-Weiss Syndrome. Among its related pathways are GPCR Pathway and RET signaling. GO annotations related to this gene include protein homodimerization activity and protein kinase activity. An important paralog of this gene is FGFR1.

UniProtKB/Swiss-Prot for FGFR2 Gene

  • Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation, migration and apoptosis, and in the regulation of embryonic development. Required for normal embryonic patterning, trophoblast function, limb bud development, lung morphogenesis, osteogenesis and skin development. Plays an essential role in the regulation of osteoblast differentiation, proliferation and apoptosis, and is required for normal skeleton development. Promotes cell proliferation in keratinocytes and immature osteoblasts, but promotes apoptosis in differentiated osteoblasts. Phosphorylates PLCG1, FRS2 and PAK4. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. FGFR2 signaling is down-regulated by ubiquitination, internalization and degradation. Mutations that lead to constitutive kinase activation or impair normal FGFR2 maturation, internalization and degradation lead to aberrant signaling. Over-expressed FGFR2 promotes activation of STAT1.

Tocris Summary for FGFR2 Gene

  • Fibroblast growth factors (FGFs) are mitogenic signaling molecules that have roles in angiogenesis, wound healing, cell migration, neural outgrowth and embryonic development. FGF receptors (FGFRs) are transmembrane catalytic receptors with intracellular tyrosine kinase activity.

Gene Wiki entry for FGFR2 Gene

No data available for PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGFR2 Gene

Genomics for FGFR2 Gene

Regulatory Elements for FGFR2 Gene

Enhancers for FGFR2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G121553 1.2 FANTOM5 ENCODE dbSUPER 37 +45.0 45035 0.2 PKNOX1 ZNF362 FOXA2 MNT FOXA1 GATA3 ZNF366 SCRT2 EZH2 FGFR2 RN7SKP167
GH10G121522 1.7 FANTOM5 Ensembl ENCODE dbSUPER 15.5 +74.9 74885 1.6 ELF3 FOXA2 ATF1 MLX ZSCAN4 RAD21 SCRT2 CREM CEBPB PPARG FGFR2 RN7SKP167
GH10G121157 1.4 FANTOM5 Ensembl ENCODE dbSUPER 12.2 +439.5 439483 3.0 ZSCAN4 ZBTB49 ZFHX2 NFIC JUND IKZF1 NR2C1 FOS NFE2 PRDM10 FGFR2 GC10M121128 LINC01153
GH10G121554 1.1 ENCODE dbSUPER 10.9 +44.6 44623 0.5 PKNOX1 NFIB FEZF1 ZNF2 HIC1 ZNF121 GLIS2 GATA3 ZNF366 SCRT2 FGFR2 RN7SKP167
GH10G121531 1.1 ENCODE dbSUPER 10.6 +67.0 67001 1.0 ELF3 ARID4B KAT2B YY1 CREM MIXL1 MXD4 CEBPB NR2F2 MIER3 FGFR2 RN7SKP167
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGFR2 on UCSC Golden Path with GeneCards custom track

Promoters for FGFR2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000034456 756 2201 PKNOX1 ARNT ZNF2 ETS1 GLIS2 ZNF263 SP3 NFYC ZNF610 GLIS1

Transcription factor binding sites by QIAGEN in the FGFR2 gene promoter:

Genomic Location for FGFR2 Gene

Chromosome:
10
Start:
121,478,330 bp from pter
End:
121,598,656 bp from pter
Size:
120,327 bases
Orientation:
Minus strand

Genomic View for FGFR2 Gene

Genes around FGFR2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGFR2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGFR2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGFR2 Gene

Proteins for FGFR2 Gene

  • Protein details for FGFR2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P21802-FGFR2_HUMAN
    Recommended name:
    Fibroblast growth factor receptor 2
    Protein Accession:
    P21802
    Secondary Accessions:
    • B4DFC2
    • E7EVR6
    • E9PCR0
    • P18443
    • Q01742
    • Q12922
    • Q14300
    • Q14301
    • Q14302
    • Q14303
    • Q14304
    • Q14305
    • Q14672
    • Q14718
    • Q14719
    • Q1KHY5
    • Q86YI4
    • Q8IXC7
    • Q96KL9
    • Q96KM0
    • Q96KM1
    • Q96KM2
    • Q9NZU2
    • Q9NZU3
    • Q9UD01
    • Q9UD02
    • Q9UIH3
    • Q9UIH4
    • Q9UIH5
    • Q9UIH6
    • Q9UIH7
    • Q9UIH8
    • Q9UM87
    • Q9UMC6
    • Q9UNS7
    • Q9UQH7
    • Q9UQH8
    • Q9UQH9
    • Q9UQI0

    Protein attributes for FGFR2 Gene

    Size:
    821 amino acids
    Molecular mass:
    92025 Da
    Quaternary structure:
    • Monomer. Homodimer after ligand binding. Interacts predominantly with FGF1 and FGF2, but can also interact with FGF3, FGF4, FGF6, FGF7, FGF8, FGF9, FGF10, FGF17, FGF18 and FGF22 (in vitro). Ligand specificity is determined by tissue-specific expression of isoforms, and differences in the third Ig-like domain are crucial for ligand specificity. Isoform 1 has high affinity for FGF1 and FGF2, but low affinity for FGF7. Isoform 3 has high affinity for FGF1 and FGF7, and has much higher affinity for FGF7 than isoform 1 (in vitro). Affinity for fibroblast growth factors (FGFs) is increased by heparan sulfate glycosaminoglycans that function as coreceptors. Likewise, KLB increases the affinity for FGF19 and FGF21. Interacts with PLCG1, GRB2 and PAK4. Interacts with FLRT2 (By similarity).
    SequenceCaution:
    • Sequence=BAG57383.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for FGFR2 Gene

neXtProt entry for FGFR2 Gene

Selected DME Specific Peptides for FGFR2 Gene

P21802:
  • SEYELPEDP
  • WEIFTLGGSP
  • NCTNELY
  • RDLAARN
  • CTQDGPLY
  • NIINLLG
  • LGKPLGEGCFGQV
  • VAVKMLK
  • AGVNTTD
  • GSINHTY
  • SDVWSFGVLMWE
  • LPVKWMA
  • DSGLYAC
  • EDAGEYTCLAGNSIG
  • PVEELFKLLKEGHRMD
  • TFKDLVSC
  • EGHRMDKP
  • LVEDLDR
  • GIDKDKP
  • EALFDRVYT
  • SQPAVHKL
  • WLKNGKEF
  • SAWLTVL
  • VMKIADFGLAR
  • SSGDDED
  • SSMNSNTPLVRI
  • PSQRPTFKQLVE
  • LRARRPP
  • IDYYKKT
  • MESVVPSD
  • AARNVLV
  • LDVVERSPH
  • PLRRQVTV
  • SGDDSVF
  • SEMEMMK
  • TNEEYLDL
  • RRQVTVS
  • CIHRDLAARNVLV
  • AVPAANT
  • CKVYSDAQPH
  • SVVPSDKG
  • PILQAGLPAN
  • PVKWMAPE
  • GDDSVFSPDPM
  • PYLKVLKAAG
  • YTHQSDVWS
  • EKDLSDL
  • GPLYVIVE
  • PEEPPTK
  • ERSPHRPILQAGLP
  • DFGLARDI
  • RRPPGMEY
  • ARGMEYLAS

Post-translational modifications for FGFR2 Gene

  • Autophosphorylated. Binding of FGF family members together with heparan sulfate proteoglycan or heparin promotes receptor dimerization and autophosphorylation on several tyrosine residues. Autophosphorylation occurs in trans between the two FGFR molecules present in the dimer. Phosphorylation at Tyr-769 is essential for interaction with PLCG1.
  • N-glycosylated in the endoplasmic reticulum. The N-glycan chains undergo further maturation to an Endo H-resistant form in the Golgi apparatus.
  • Ubiquitinated. FGFR2 is rapidly ubiquitinated after autophosphorylation, leading to internalization and degradation. Subject to degradation both in lysosomes and by the proteasome.
  • Glycosylation at isoforms=10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 2, 23, 3, 5, 6, 7, 8, 983, isoforms=10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 2, 23, 3, 5, 6, 7, 8, 9123, isoforms=10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 2, 20, 21, 22, 23, 3, 4, 5, 6, 7, 8, 9228, isoforms=10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 2, 20, 21, 22, 23, 3, 4, 5, 6, 7, 8, 9241, Asn265, isoforms=10, 11, 12, 13, 15, 16, 17, 18, 19, 2, 20, 21, 22, 3, 4, 5, 6, 7, 8, 9297, Asn318, and isoforms=10, 11, 12, 13, 16, 17, 18, 19, 2, 20, 21, 22, 3, 4, 5, 6, 7, 8, 9331
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for FGFR2 (FGFR2)
  • Cloud-Clone Corp. Antibodies for FGFR2
  • Santa Cruz Biotechnology (SCBT) Antibodies for FGFR2

Protein Products

  • Abcam proteins for FGFR2

Assay Products

  • Cloud-Clone Corp Assay Kits for FGFR2

Domains & Families for FGFR2 Gene

Graphical View of Domain Structure for InterPro Entry

P21802

UniProtKB/Swiss-Prot:

FGFR2_HUMAN :
  • The second and third Ig-like domains directly interact with fibroblast growth factors (FGF) and heparan sulfate proteoglycans. Alternative splicing events affecting the third Ig-like domain are crucial for ligand selectivity.
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. Fibroblast growth factor receptor subfamily.
Domain:
  • The second and third Ig-like domains directly interact with fibroblast growth factors (FGF) and heparan sulfate proteoglycans. Alternative splicing events affecting the third Ig-like domain are crucial for ligand selectivity.
Family:
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. Fibroblast growth factor receptor subfamily.
genes like me logo Genes that share domains with FGFR2: view

Function for FGFR2 Gene

Molecular function for FGFR2 Gene

GENATLAS Biochemistry:
fibroblast growth factor receptor 2,involved in vertebral development
UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.
UniProtKB/Swiss-Prot EnzymeRegulation:
Present in an inactive conformation in the absence of bound ligand. Ligand binding leads to dimerization and activation by autophosphorylation on tyrosine residues. Inhibited by ARQ 523 and ARQ 069; these compounds maintain the kinase in an inactive conformation and inhibit autophosphorylation.
UniProtKB/Swiss-Prot Function:
Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation, migration and apoptosis, and in the regulation of embryonic development. Required for normal embryonic patterning, trophoblast function, limb bud development, lung morphogenesis, osteogenesis and skin development. Plays an essential role in the regulation of osteoblast differentiation, proliferation and apoptosis, and is required for normal skeleton development. Promotes cell proliferation in keratinocytes and immature osteoblasts, but promotes apoptosis in differentiated osteoblasts. Phosphorylates PLCG1, FRS2 and PAK4. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. FGFR2 signaling is down-regulated by ubiquitination, internalization and degradation. Mutations that lead to constitutive kinase activation or impair normal FGFR2 maturation, internalization and degradation lead to aberrant signaling. Over-expressed FGFR2 promotes activation of STAT1.

Enzyme Numbers (IUBMB) for FGFR2 Gene

Gene Ontology (GO) - Molecular Function for FGFR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0004672 protein kinase activity IEA --
GO:0004713 protein tyrosine kinase activity IEA,TAS --
GO:0004714 transmembrane receptor protein tyrosine kinase activity IEA --
GO:0005007 fibroblast growth factor-activated receptor activity IEA,NAS 1400433
genes like me logo Genes that share ontologies with FGFR2: view
genes like me logo Genes that share phenotypes with FGFR2: view

Human Phenotype Ontology for FGFR2 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Models for FGFR2 Gene

MGI Knock Outs for FGFR2:

Animal Model Products

CRISPR Products

miRNA for FGFR2 Gene

Clone Products

  • Addgene plasmids for FGFR2

No data available for Transcription Factor Targets and HOMER Transcription for FGFR2 Gene

Localization for FGFR2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FGFR2 Gene

Cell membrane; Single-pass type I membrane protein. Golgi apparatus. Cytoplasmic vesicle. Note=Detected on osteoblast plasma membrane lipid rafts. After ligand binding, the activated receptor is rapidly internalized and degraded.
Isoform 1: Cell membrane; Single-pass type I membrane protein. Note=After ligand binding, the activated receptor is rapidly internalized and degraded.
Isoform 3: Cell membrane; Single-pass type I membrane protein. Note=After ligand binding, the activated receptor is rapidly internalized and degraded.
Isoform 14: Secreted.
Isoform 19: Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FGFR2 gene
Compartment Confidence
plasma membrane 5
extracellular 5
nucleus 5
golgi apparatus 5
cytoskeleton 1
peroxisome 1
endoplasmic reticulum 1
cytosol 1
lysosome 1

Gene Ontology (GO) - Cellular Components for FGFR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005634 nucleus IDA 16597614
GO:0005654 nucleoplasm IDA --
GO:0005737 cytoplasm IDA 16597614
GO:0005794 Golgi apparatus IEA --
genes like me logo Genes that share ontologies with FGFR2: view

Pathways & Interactions for FGFR2 Gene

SuperPathways for FGFR2 Gene

SuperPathway Contained pathways
1 RET signaling
2 Apoptotic Pathways in Synovial Fibroblasts
3 GPCR Pathway
4 GAB1 signalosome
5 Downstream signaling of activated FGFR2
genes like me logo Genes that share pathways with FGFR2: view

SIGNOR curated interactions for FGFR2 Gene

Activates:
Is activated by:
Other effect:

Gene Ontology (GO) - Biological Process for FGFR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter ISS --
GO:0000165 MAPK cascade TAS --
GO:0001525 angiogenesis ISS --
GO:0001657 ureteric bud development ISS --
GO:0001701 in utero embryonic development ISS --
genes like me logo Genes that share ontologies with FGFR2: view

Drugs & Compounds for FGFR2 Gene

(84) Drugs for FGFR2 Gene - From: DrugBank, ClinicalTrials, ApexBio, DGIdb, FDA Approved Drugs, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Palifermin Approved Pharma binder, Target 0
Lenvatinib Approved Pharma inhibitor, Target Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 62
Nintedanib Approved Pharma inhibitor, Target VEGFR, FGFR, PDGFR, and FLT3 inhibitor, Kinase Inhibitors 116
ponatinib Approved Pharma inhibitor, Target Kinase Inhibitors, Fibroblast growth factor receptor (FGFR)inhibitors 32
regorafenib Approved Pharma inhibitor, Target Inhibitor of VEGFR/PDGFR/FGFR/mutant kit/RET/Raf-1, Kinase Inhibitors, Vascular endothelial growth factor (VEGF) and VEGF receptor (VEGFR) inhibitors 0

(37) Additional Compounds for FGFR2 Gene - From: Novoseek, HMDB, and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ADP
  • Adenosindiphosphorsaeure
  • Adenosine 5'-pyrophosphate
  • Adenosine diphosphate
  • Adenosine pyrophosphate
  • Adenosine-5'-diphosphate
Full agonist, Agonist 58-64-0
cis,trans-5'-Hydroxythalidomide
FIIN 1 hydrochloride
1256152-35-8
SUN 11602
704869-38-5

(4) Tocris Compounds for FGFR2 Gene

Compound Action Cas Number
FIIN 1 hydrochloride Potent, irreversible FGFR inhibitor 1256152-35-8
PD 161570 Selective FGFR inhibitor 192705-80-9
PD 173074 FGFR1 and -3 inhibitor 219580-11-7
SUN 11602 Basic fibroblast growth factor (bFGF) mimetic; neuroprotective 704869-38-5

(12) ApexBio Compounds for FGFR2 Gene

Compound Action Cas Number
ACTB-1003 939805-30-8
AZD4547 FGFR inhibitor 1035270-39-3
BGJ398 FGFR inhibitor ,potent and selective 872511-34-7
CH5183284 (Debio-1347) 1265229-25-1
Dovitinib (TKI258) Lactate Oral tyrosine kinase inhibitor (TKI) against FGFR1–3, VEGFR1–3, and platelet-derived growth factor receptor (PDGFR) 915769-50-5
LY2874455 FGF/FGFR Inhibitor 1254473-64-7
NVP-BGJ398 phosphate FGFR inhibitor 1310746-10-1
Pazopanib Hydrochloride VEGFR/PDGFR/FGFR/c-Kit/ c-Fms inhibitor 635702-64-6
PD 161570 192705-80-9
PD 173074 FGFR inhibitor 219580-11-7
Vandetanib (ZD6474) VEGFR2/EGFR antagonist 443913-73-3
XL228 IGF1R/AURORA /FGFR1-3/ABL/SRC family kinases inhibitor 898280-07-4
genes like me logo Genes that share compounds with FGFR2: view

Drug Products

Transcripts for FGFR2 Gene

Unigene Clusters for FGFR2 Gene

Fibroblast growth factor receptor 2:
Representative Sequences:

CRISPR Products

Clone Products

  • Addgene plasmids for FGFR2

Alternative Splicing Database (ASD) splice patterns (SP) for FGFR2 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16a · 16b ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^
SP1: - - - - - - - -
SP2: - - - - - - - -
SP3: - -
SP4: - - - - - - - - - - -
SP5: - - - - - - - - - - -
SP6:
SP7:
SP8:
SP9:
SP10:

ExUns: 23 ^ 24 ^ 25a · 25b ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:

Relevant External Links for FGFR2 Gene

GeneLoc Exon Structure for
FGFR2
ECgene alternative splicing isoforms for
FGFR2

Expression for FGFR2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGFR2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FGFR2 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x6.9).

Protein differential expression in normal tissues from HIPED for FGFR2 Gene

This gene is overexpressed in Heart (54.2) and Pancreatic juice (6.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for FGFR2 Gene



Protein tissue co-expression partners for FGFR2 Gene

NURSA nuclear receptor signaling pathways regulating expression of FGFR2 Gene:

FGFR2

SOURCE GeneReport for Unigene cluster for FGFR2 Gene:

Hs.533683

Evidence on tissue expression from TISSUES for FGFR2 Gene

  • Nervous system(4.8)
  • Eye(4.4)
  • Liver(4.4)
  • Blood(4.3)
  • Skin(3.1)
  • Lung(2.5)
  • Bone(2.4)
  • Kidney(2.4)
  • Intestine(2.3)
  • Stomach(2.3)
  • Thyroid gland(2)

Phenotype-based relationships between genes and organs from Gene ORGANizer for FGFR2 Gene

Germ Layers:
  • ectoderm
  • endoderm
  • mesoderm
Systems:
  • cardiovascular
  • digestive
  • endocrine
  • immune
  • integumentary
  • nervous
  • reproductive
  • respiratory
  • skeletal muscle
  • skeleton
  • urinary
Organs:
Head and neck:
  • brain
  • cerebellum
  • cerebrospinal fluid
  • cheek
  • chin
  • cranial nerve
  • ear
  • epiglottis
  • eye
  • eyelid
  • face
  • forehead
  • head
  • inner ear
  • jaw
  • lacrimal apparatus
  • larynx
  • lip
  • mandible
  • maxilla
  • meninges
  • middle ear
  • mouth
  • neck
  • nose
  • outer ear
  • pharynx
  • salivary gland
  • scalp
  • skull
  • tongue
  • tooth
  • vocal cord
Thorax:
  • aorta
  • breast
  • bronchus
  • chest wall
  • clavicle
  • esophagus
  • heart
  • heart valve
  • lung
  • rib
  • rib cage
  • scapula
  • sternum
  • trachea
Abdomen:
  • intestine
  • kidney
  • large intestine
  • liver
  • pancreas
  • small intestine
  • spleen
  • stomach
Pelvis:
  • anus
  • pelvis
  • penis
  • rectum
  • testicle
  • ureter
  • urethra
  • urinary bladder
  • vagina
  • vulva
Limb:
  • ankle
  • arm
  • digit
  • elbow
  • femur
  • finger
  • foot
  • forearm
  • hand
  • hip
  • humerus
  • knee
  • lower limb
  • nail
  • radius
  • shin
  • shoulder
  • thigh
  • tibia
  • toe
  • ulna
  • upper limb
  • wrist
General:
  • blood
  • blood vessel
  • hair
  • peripheral nerve
  • peripheral nervous system
  • skin
  • spinal column
  • spinal cord
  • vertebrae
  • white blood cell
genes like me logo Genes that share expression patterns with FGFR2: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for FGFR2 Gene

Orthologs for FGFR2 Gene

This gene was present in the common ancestor of animals.

Orthologs for FGFR2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FGFR2 34 35
  • 95.79 (n)
dog
(Canis familiaris)
Mammalia FGFR2IIIC 35
  • 93 (a)
OneToOne
FGFR2 34
  • 92.04 (n)
cow
(Bos Taurus)
Mammalia FGFR2 34 35
  • 91.38 (n)
oppossum
(Monodelphis domestica)
Mammalia FGFR2 35
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fgfr2 34 16 35
  • 89.38 (n)
rat
(Rattus norvegicus)
Mammalia Fgfr2 34
  • 89.21 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia FGFR2 35
  • 86 (a)
OneToOne
chicken
(Gallus gallus)
Aves FGFR2 34 35
  • 81.66 (n)
lizard
(Anolis carolinensis)
Reptilia FGFR2 35
  • 87 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fgfr2 34
  • 70.92 (n)
Str.1655 34
African clawed frog
(Xenopus laevis)
Amphibia Xl.1182 34
zebrafish
(Danio rerio)
Actinopterygii fgfr2 34 35
  • 70.89 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP003108 34
  • 54.22 (n)
fruit fly
(Drosophila melanogaster)
Insecta btl 36 34 35
  • 49.26 (n)
tor 36
  • 45 (a)
htl 36 35
  • 41 (a)
worm
(Caenorhabditis elegans)
Secernentea egl-15 36 35
  • 37 (a)
R151.4 36
  • 37 (a)
kin-9 36
  • 36 (a)
old-2 36
  • 36 (a)
C24G6.2b 36
  • 36 (a)
C24G6.2a 36
  • 36 (a)
F59A3.8 36
  • 34 (a)
kin-16 36
  • 34 (a)
W04G5.10 36
  • 34 (a)
old-1 36
  • 34 (a)
kin-23 36
  • 33 (a)
F09G2.1 36
  • 32 (a)
R09D1.12 36
  • 31 (a)
R09D1.13 36
  • 31 (a)
Y38H6C.20 36
  • 31 (a)
Y50D4B.6 36
  • 31 (a)
F09A5.2 36
  • 30 (a)
ver-4 36
  • 27 (a)
ver-2 36
  • 27 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 43 (a)
OneToMany
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.2511 34
Species where no ortholog for FGFR2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for FGFR2 Gene

ENSEMBL:
Gene Tree for FGFR2 (if available)
TreeFam:
Gene Tree for FGFR2 (if available)

Paralogs for FGFR2 Gene

genes like me logo Genes that share paralogs with FGFR2: view

Variants for FGFR2 Gene

Sequence variations from dbSNP and Humsavar for FGFR2 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs121913477 Pathogenic, Beare-Stevenson cutis gyrata syndrome (BSTVS) [MIM:123790] 121,515,289(-) AGCTT(C/G)CCCAG intron-variant, nc-transcript-variant, reference, missense
rs121913478 Pathogenic, Beare-Stevenson cutis gyrata syndrome (BSTVS) [MIM:123790], Pfeiffer syndrome (PS) [MIM:101600] 121,515,280(-) AGACT(A/G)CCTGG intron-variant, nc-transcript-variant, reference, missense
rs121918487 Pathogenic, Crouzon syndrome (CS) [MIM:123500], Pfeiffer syndrome (PS) [MIM:101600] 121,517,378(-) TACGT(A/C/G/T)CTTGG intron-variant, nc-transcript-variant, reference, missense
rs121918488 Pathogenic, Antley-Bixler syndrome, without genital anomalies or disordered steroidogenesis (ABS2) [MIM:207410], Crouzon syndrome (CS) [MIM:123500], Jackson-Weiss syndrome (JWS) [MIM:123150], Pfeiffer syndrome (PS) [MIM:101600], Antley-Bixler syndrome, without genital anomalies or disordered steroidogenesis (ABS2) [MIM:207410], Crouzon syndrome (CS) [MIM:123500], Jackson-Weiss syndrome (JWS) [MIM:123150], Pfeiffer syndrome (PS) [MIM:101600] 121,517,379(-) ATACG(A/C/G/T)GCTTG intron-variant, nc-transcript-variant, reference, missense
rs121918489 Pathogenic, Crouzon syndrome (CS) [MIM:123500] 121,517,385(-) GGGAA(C/T)ATACG intron-variant, nc-transcript-variant, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for FGFR2 Gene

Variant ID Type Subtype PubMed ID
dgv981n100 CNV gain 25217958
dgv982n100 CNV gain 25217958
esv1049168 CNV deletion 17803354
esv2676868 CNV deletion 23128226
esv3624751 CNV loss 21293372
nsv1035944 CNV gain 25217958
nsv1039943 CNV gain 25217958
nsv1043313 CNV gain 25217958
nsv1113340 CNV deletion 24896259
nsv428239 CNV gain+loss 18775914
nsv470972 CNV gain 18288195
nsv472204 CNV novel sequence insertion 20440878
nsv474251 CNV novel sequence insertion 20440878

Variation tolerance for FGFR2 Gene

Residual Variation Intolerance Score: 7.88% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.94; 67.91% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FGFR2 Gene

Human Gene Mutation Database (HGMD)
FGFR2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGFR2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FGFR2 Gene

Disorders for FGFR2 Gene

MalaCards: The human disease database

(72) MalaCards diseases for FGFR2 Gene - From: OMIM, ClinVar, GeneTests, Orphanet, Swiss-Prot, DISEASES, Novoseek, and GeneCards