Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FGF7P3 Gene

Aliases for FGF7P3 Gene

  • Fibroblast Growth Factor 7 Pseudogene 3 2 3 5
  • Keratinocyte Growth Factor-Like Protein 2 3
  • KGFLP2 3

External Ids for FGF7P3 Gene

Summaries for FGF7P3 Gene

GeneCards Summary for FGF7P3 Gene

FGF7P3 (Fibroblast Growth Factor 7 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF7P3 Gene

Genomics for FGF7P3 Gene

Regulatory Elements for FGF7P3 Gene

Enhancers for FGF7P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G040110 0.2 Ensembl 0.7 -3.8 -3840 0.6 FGF7P3 LOC100419924
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF7P3 on UCSC Golden Path with GeneCards custom track

Promoters for FGF7P3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000235071 261 2001 L3MBTL2 NRF1 ZSCAN4 CEBPB CEBPG ZNF48 TARDBP NBN ZBTB26 MGA

Genomic Location for FGF7P3 Gene

Chromosome:
9
Start:
39,813,784 bp from pter
End:
40,106,661 bp from pter
Size:
292,878 bases
Orientation:
Minus strand

Genomic View for FGF7P3 Gene

Genes around FGF7P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF7P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF7P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF7P3 Gene

Proteins for FGF7P3 Gene

Post-translational modifications for FGF7P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF7P3 Gene

Domains & Families for FGF7P3 Gene

Suggested Antigen Peptide Sequences for FGF7P3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FGF7P3 Gene

Function for FGF7P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF7P3 Gene

Localization for FGF7P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FGF7P3 Gene

Pathways & Interactions for FGF7P3 Gene

SuperPathways for FGF7P3 Gene

No Data Available

Interacting Proteins for FGF7P3 Gene

Gene Ontology (GO) - Biological Process for FGF7P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF7P3 Gene

Transcripts for FGF7P3 Gene

mRNA/cDNA for FGF7P3 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FGF7P3 Gene

No ASD Table

Relevant External Links for FGF7P3 Gene

GeneLoc Exon Structure for
FGF7P3
ECgene alternative splicing isoforms for
FGF7P3

Expression for FGF7P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of FGF7P3 Gene:

FGF7P3
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF7P3 Gene

Orthologs for FGF7P3 Gene

Evolution for FGF7P3 Gene

ENSEMBL:
Gene Tree for FGF7P3 (if available)
TreeFam:
Gene Tree for FGF7P3 (if available)

No data available for Orthologs for FGF7P3 Gene

Paralogs for FGF7P3 Gene

No data available for Paralogs for FGF7P3 Gene

Variants for FGF7P3 Gene

Sequence variations from dbSNP and Humsavar for FGF7P3 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000484491 -- 39,833,814(+) TATAC(C/T)ACCAT intron-variant
rs1000929276 -- 39,863,958(+) GAATA(A/T)AATGA intron-variant, downstream-variant-500B
rs1000959010 -- 39,862,684(+) AGACA(A/G)GGTTT intron-variant
rs1001091972 -- 39,826,166(+) CTATA(C/G)TGAAA intron-variant
rs1001564386 -- 39,824,331(+) AAACA(A/T)GCTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FGF7P3 Gene

Variant ID Type Subtype PubMed ID
dgv1338e199 CNV deletion 23128226
dgv1473e214 CNV gain 21293372
dgv4000n106 CNV duplication 24896259
dgv7541n100 CNV gain+loss 25217958
dgv7542n100 CNV gain 25217958
dgv7546n100 CNV loss 25217958
dgv7547n100 CNV gain+loss 25217958
esv22064 CNV gain+loss 19812545
esv3351128 CNV duplication 20981092
esv3353162 CNV duplication 20981092
esv3358339 CNV duplication 20981092
esv3424422 CNV duplication 20981092
esv3430946 CNV duplication 20981092
esv3620460 CNV loss 21293372
esv994034 CNV gain 20482838
nsv1020579 CNV gain+loss 25217958
nsv1021539 CNV gain 25217958
nsv1033842 CNV gain 25217958
nsv1076654 CNV duplication 25765185
nsv1110525 CNV duplication 24896259
nsv1119266 CNV duplication 24896259
nsv1125028 CNV duplication 24896259
nsv1137643 CNV deletion 24896259
nsv1146046 CNV duplication 26484159
nsv1151453 CNV duplication 26484159
nsv1151558 CNV duplication 26484159
nsv1161861 CNV deletion 26073780
nsv442542 CNV gain+loss 18776908
nsv515141 CNV gain 21397061
nsv951721 CNV duplication 24416366
nsv951722 CNV deletion 24416366
nsv968634 CNV duplication 23825009
nsv968635 CNV duplication 23825009
nsv968636 CNV duplication 23825009
nsv969539 CNV duplication 23825009
nsv973238 CNV duplication 23825009
nsv973239 CNV duplication 23825009
nsv982392 CNV duplication 23825009
nsv982394 CNV duplication 23825009

Relevant External Links for FGF7P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF7P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FGF7P3 Gene

Disorders for FGF7P3 Gene

Relevant External Links for FGF7P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FGF7P3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FGF7P3

No disorders were found for FGF7P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF7P3 Gene

Publications for FGF7P3 Gene

  1. FGF7-like gene is associated with pericentric inversion of chromosome 9, and FGF7 is involved in the development of ovarian cancer. (PMID: 15809711) Yasuhara T. … Ohtake Y. (Int. J. Oncol. 2005) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for FGF7P3 Gene

Sources for FGF7P3 Gene

Content
Loading form....