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Aliases for FGF14-IT1 Gene

Subcategory (RNA class) for FGF14-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FGF14-IT1 Gene

  • FGF14 Intronic Transcript 1 2 3 5
  • FGF14 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for FGF14-IT1 Gene

Previous GeneCards Identifiers for FGF14-IT1 Gene

  • GC13M102946

Summaries for FGF14-IT1 Gene

GeneCards Summary for FGF14-IT1 Gene

FGF14-IT1 (FGF14 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FGF14-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF14-IT1 Gene

Genomics for FGF14-IT1 Gene

Regulatory Elements for FGF14-IT1 Gene

Enhancers for FGF14-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H102457 0.8 ENCODE 11.3 -63.0 -63017 0.1 ELF3 CTCF PKNOX1 ETV1 MAX ZNF644 RAD21 RELA YY1 TEAD3 FGF14 FGF14-IT1 FGF14-AS1 GC13M102485
GH13H102285 0.7 ENCODE 8.4 +108.0 108035 1.7 FOXA2 JUN CEBPB MAX REST EP300 RAD21 YY1 JUND ATF3 FGF14-IT1 GC13M102249 ENSG00000279702
GH13H102355 0.2 ENCODE 10.8 +39.1 39094 0.2 FGF14-IT1 FGF14 FGF14-AS1 GC13P102315
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF14-IT1 on UCSC Golden Path with GeneCards custom track

Promoters for FGF14-IT1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000065313 -81 1600 HDAC1 TBL1XR1 RB1 ZNF76 SIN3A BMI1 RAD21 YY1 ETS1 SCRT2

Genomic Locations for FGF14-IT1 Gene

Genomic Locations for FGF14-IT1 Gene
102,200 bases
Minus strand

Genomic View for FGF14-IT1 Gene

Genes around FGF14-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF14-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF14-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF14-IT1 Gene

Proteins for FGF14-IT1 Gene

Post-translational modifications for FGF14-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF14-IT1 Gene

Domains & Families for FGF14-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF14-IT1 Gene

Function for FGF14-IT1 Gene

Phenotypes for FGF14-IT1 Gene

GenomeRNAi human phenotypes for FGF14-IT1:
genes like me logo Genes that share phenotypes with FGF14-IT1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF14-IT1 Gene

Localization for FGF14-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FGF14-IT1 Gene

Pathways & Interactions for FGF14-IT1 Gene

SuperPathways for FGF14-IT1 Gene

No Data Available

Interacting Proteins for FGF14-IT1 Gene

Gene Ontology (GO) - Biological Process for FGF14-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FGF14-IT1 Gene

Drugs & Compounds for FGF14-IT1 Gene

No Compound Related Data Available

Transcripts for FGF14-IT1 Gene

mRNA/cDNA for FGF14-IT1 Gene

(4) Additional mRNA sequences :
(21) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF14-IT1 Gene

FGF14 intronic transcript 1 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FGF14-IT1 Gene

No ASD Table

Relevant External Links for FGF14-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FGF14-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF14-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for FGF14-IT1 Gene

This gene is overexpressed in Testis (x33.1) and Brain - Cerebellum (x4.1).

SOURCE GeneReport for Unigene cluster for FGF14-IT1 Gene:

genes like me logo Genes that share expression patterns with FGF14-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF14-IT1 Gene

Orthologs for FGF14-IT1 Gene

Evolution for FGF14-IT1 Gene

Gene Tree for FGF14-IT1 (if available)
Gene Tree for FGF14-IT1 (if available)

No data available for Orthologs for FGF14-IT1 Gene

Paralogs for FGF14-IT1 Gene

No data available for Paralogs for FGF14-IT1 Gene

Variants for FGF14-IT1 Gene

Sequence variations from dbSNP and Humsavar for FGF14-IT1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000001695 -- 102,320,503(+) ATGGT(A/G)ACTAA intron-variant
rs1000017712 -- 102,350,432(+) TCAGC(C/T)TCACA intron-variant
rs1000031932 -- 102,391,264(+) TTTGC(C/T)ACAAC intron-variant
rs1000044586 -- 102,362,581(+) GGGTA(A/G)GTTAA intron-variant
rs1000142641 -- 102,314,228(+) CATCT(C/T)ACAAA intron-variant

Relevant External Links for FGF14-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FGF14-IT1 Gene

Disorders for FGF14-IT1 Gene

Relevant External Links for FGF14-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FGF14-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF14-IT1 Gene

Publications for FGF14-IT1 Gene

  1. A genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis. (PMID: 23509962) Greliche N … Trégouët DA (BMC medical genetics 2013) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for FGF14-IT1 Gene

Sources for FGF14-IT1 Gene

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