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Aliases for FGF14-AS2 Gene

Subcategory (RNA class) for FGF14-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FGF14-AS2 Gene

  • FGF14 Antisense RNA 2 2 3 5

External Ids for FGF14-AS2 Gene

ORGUL Members for FGF14-AS2 Gene

Previous GeneCards Identifiers for FGF14-AS2 Gene

  • GC13P103047

Summaries for FGF14-AS2 Gene

GeneCards Summary for FGF14-AS2 Gene

FGF14-AS2 (FGF14 Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF14-AS2 Gene

Genomics for FGF14-AS2 Gene

Regulatory Elements for FGF14-AS2 Gene

Enhancers for FGF14-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F102393 0.9 ENCODE 21.1 +0.1 60 1.9 HDAC1 TBL1XR1 ZNF76 SIN3A BMI1 RAD21 ZBTB40 ETS1 YY1 ELK1 FGF14-AS2 FGF14-AS1 GC13P102395
GH13F102399 1 FANTOM5 ENCODE 7.6 +5.7 5664 1.8 CTCF CBX2 REST ZIC2 RAD21 ZFHX2 KDM1A EZH2 EGR2 FGF14 FGF14-AS2 BIVM GC13P102395
GH13F102317 0.8 ENCODE 5.5 -76.7 -76749 1.2 PKNOX1 RAD21 YY1 POLR2A CBX5 EED CREM MTA2 ZBED1 TRIM22 FGF14-AS2 GC13P102315 FGF14-AS1
GH13F102198 0.6 ENCODE 4.5 -195.5 -195491 1.2 JUND JUN CEBPB STAT3 FOS EP300 FGF14-AS2 RPL39P29 GC13P102111
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for FGF14-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000151640 -77 1799 HDAC1 TBL1XR1 ZNF76 SIN3A BMI1 RAD21 ZBTB40 ETS1 YY1 ELK1

Genomic Location for FGF14-AS2 Gene

Chromosome:
13
Start:
102,394,578 bp from pter
End:
102,395,705 bp from pter
Size:
1,128 bases
Orientation:
Plus strand

Genomic View for FGF14-AS2 Gene

Genes around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF14-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF14-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF14-AS2 Gene

Proteins for FGF14-AS2 Gene

Post-translational modifications for FGF14-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF14-AS2 Gene

Domains & Families for FGF14-AS2 Gene

Gene Families for FGF14-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FGF14-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF14-AS2 Gene

Function for FGF14-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF14-AS2 Gene

Localization for FGF14-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FGF14-AS2 Gene

Pathways & Interactions for FGF14-AS2 Gene

SuperPathways for FGF14-AS2 Gene

No Data Available

Interacting Proteins for FGF14-AS2 Gene

Gene Ontology (GO) - Biological Process for FGF14-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF14-AS2 Gene

Transcripts for FGF14-AS2 Gene

mRNA/cDNA for FGF14-AS2 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF14-AS2 Gene

FGF14 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FGF14-AS2 Gene

No ASD Table

Relevant External Links for FGF14-AS2 Gene

GeneLoc Exon Structure for
FGF14-AS2
ECgene alternative splicing isoforms for
FGF14-AS2

Expression for FGF14-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FGF14-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for FGF14-AS2 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.1).

SOURCE GeneReport for Unigene cluster for FGF14-AS2 Gene:

Hs.646604
genes like me logo Genes that share expression patterns with FGF14-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FGF14-AS2 Gene

Orthologs for FGF14-AS2 Gene

Evolution for FGF14-AS2 Gene

ENSEMBL:
Gene Tree for FGF14-AS2 (if available)
TreeFam:
Gene Tree for FGF14-AS2 (if available)

No data available for Orthologs for FGF14-AS2 Gene

Paralogs for FGF14-AS2 Gene

No data available for Paralogs for FGF14-AS2 Gene

Variants for FGF14-AS2 Gene

Sequence variations from dbSNP and Humsavar for FGF14-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs111284253 -- 102,394,520(+) GCAAC(A/G)ACAGC intron-variant, upstream-variant-2KB
rs111667080 -- 102,393,527(+) AGATT(A/T)TTCCC intron-variant, upstream-variant-2KB
rs111804493 -- 102,394,180(+) CAGAA(C/T)CACCA intron-variant, upstream-variant-2KB
rs112146070 -- 102,395,484(+) TCTGC(A/G)GGACC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs114956063 -- 102,392,809(+) CCGCT(A/C)ACCAC intron-variant, upstream-variant-2KB

Relevant External Links for FGF14-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF14-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FGF14-AS2 Gene

Disorders for FGF14-AS2 Gene

Relevant External Links for FGF14-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FGF14-AS2

No disorders were found for FGF14-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF14-AS2 Gene

Publications for FGF14-AS2 Gene

  1. A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer. (PMID: 26820525) Yang F. … Wang O.C. (Biochem. Biophys. Res. Commun. 2016) 2 3 64
  2. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for FGF14-AS2 Gene

Sources for FGF14-AS2 Gene

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