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FGF14-AS2 Gene(RNA Gene)

FGF14 Antisense RNA 2

GCID:
GC13P102394
GIFtS:
19
Genes Participants
UDN Logo

Aliases for FGF14-AS2 Gene

Subcategory (RNA class) for FGF14-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FGF14-AS2 Gene

  • FGF14 Antisense RNA 2 2 3 5

External Ids for FGF14-AS2 Gene

ORGUL Members for FGF14-AS2 Gene

Previous GeneCards Identifiers for FGF14-AS2 Gene

  • GC13P103047

Summaries for FGF14-AS2 Gene

GeneCards Summary for FGF14-AS2 Gene

FGF14-AS2 (FGF14 Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF14-AS2 Gene

Genomics for FGF14-AS2 Gene

Products:

  1. Regulatory Element

Regulatory Elements for FGF14-AS2 Gene

Enhancers for FGF14-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G102393 0.9 ENCODE 21 +0.1 60 1.9 ATF1 E2F7 SIN3A YY1 ETS1 ELK1 ZNF207 YY2 REST ZNF518A FGF14-AS2 FGF14-AS1 GC13P102395
GH13G102399 1.3 FANTOM5 Ensembl ENCODE 7.7 +5.7 5664 1.8 CTCF SUZ12 TAF1 CHD1 CBX2 REST ZIC2 RAD21 ZFHX2 KDM1A FGF14 FGF14-AS2 BIVM GC13P102395
GH13G102317 0.8 ENCODE 5.6 -76.7 -76749 1.2 PKNOX1 TAF1 MAX RAD21 YY1 POLR2A CBX5 EED HNF4G RELB FGF14-AS2 GC13P102315 FGF14-AS1
GH13G102198 0.6 ENCODE 4.5 -195.5 -195491 1.2 JUN CEBPB EP300 YY1 FOXA1 JUND ATF3 STAT3 HNF4A FOS FGF14-AS2 RPL39P29 GC13P102111
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for FGF14-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000065313 22 1600 E2F7 SIN3A YY1 ETS1 ELK1 ZNF207 YY2 REST ZNF518A RFX3

Genomic Location for FGF14-AS2 Gene

Chromosome:
13
Start:
102,394,578 bp from pter
End:
102,395,705 bp from pter
Size:
1,128 bases
Orientation:
Plus strand

Genomic View for FGF14-AS2 Gene

Genes around FGF14-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF14-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF14-AS2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FGF14-AS2 Gene

Proteins for FGF14-AS2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for FGF14-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF14-AS2 Gene

Domains & Families for FGF14-AS2 Gene

Gene Families for FGF14-AS2 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FGF14-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF14-AS2 Gene

Function for FGF14-AS2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF14-AS2 Gene

Localization for FGF14-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FGF14-AS2 Gene

Pathways & Interactions for FGF14-AS2 Gene

SuperPathways for FGF14-AS2 Gene

PathCards logo More details on SuperPathways for FGF14-AS2
No Data Available

Interacting Proteins for FGF14-AS2 Gene

Gene Ontology (GO) - Biological Process for FGF14-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF14-AS2 Gene

Drugs & Compounds for FGF14-AS2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FGF14-AS2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for FGF14-AS2 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF14-AS2 Gene

FGF14 antisense RNA 2:
Representative Sequences:

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FGF14-AS2 Gene

No ASD Table

Relevant External Links for FGF14-AS2 Gene

GeneLoc Exon Structure for
FGF14-AS2
ECgene alternative splicing isoforms for
FGF14-AS2

Expression for FGF14-AS2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF14-AS2 Gene

mRNA expression in normal human tissues for FGF14-AS2 Gene
mRNA expression by GTEx for FGF14-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for FGF14-AS2 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.1).

SOURCE GeneReport for Unigene cluster for FGF14-AS2 Gene:

Hs.646604
genes like me logo Genes that share expression patterns with FGF14-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF14-AS2 Gene

Orthologs for FGF14-AS2 Gene

Evolution for FGF14-AS2 Gene

ENSEMBL:
Gene Tree for FGF14-AS2 (if available)
TreeFam:
Gene Tree for FGF14-AS2 (if available)

No data available for Orthologs for FGF14-AS2 Gene

Paralogs for FGF14-AS2 Gene

No data available for Paralogs for FGF14-AS2 Gene

Variants for FGF14-AS2 Gene

Sequence variations from dbSNP and Humsavar for FGF14-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000341232 -- 102,393,208(+) CACCT(C/T)GGTCC intron-variant, upstream-variant-2KB
rs1000775960 -- 102,392,881(+) TCCAC(A/G)CTGTA intron-variant, upstream-variant-2KB
rs1001502167 -- 102,395,339(+) TTGCT(A/G)TTCTA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001792997 -- 102,394,199(+) AGCTC(C/T)CTTCC intron-variant, upstream-variant-2KB
rs1001901759 -- 102,394,947(+) CTTCT(A/G)CCAAA intron-variant, nc-transcript-variant, upstream-variant-2KB

Relevant External Links for FGF14-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF14-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FGF14-AS2 Gene

Disorders for FGF14-AS2 Gene

Relevant External Links for FGF14-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FGF14-AS2

No disorders were found for FGF14-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF14-AS2 Gene

Publications for FGF14-AS2 Gene

  1. A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer. (PMID: 26820525) Yang F. … Wang O.C. (Biochem. Biophys. Res. Commun. 2016) 2 3 64
  2. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for FGF14-AS2 Gene

Sources for FGF14-AS2 Gene

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