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Aliases for FGF13-AS1 Gene

Subcategory (RNA class) for FGF13-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FGF13-AS1 Gene

  • FGF13 Antisense RNA 1 2 3 5
  • FGF13 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FGF13-AS1 Gene

Previous GeneCards Identifiers for FGF13-AS1 Gene

  • GC0XP137794

Summaries for FGF13-AS1 Gene

GeneCards Summary for FGF13-AS1 Gene

FGF13-AS1 (FGF13 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FGF13-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF13-AS1 Gene

Genomics for FGF13-AS1 Gene

GeneHancer (GH) Regulatory Elements for FGF13-AS1 Gene

Promoters and enhancers for FGF13-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI138710 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 561.2 +0.1 133 2.9 CTCF ZNF777 INSM2 MZF1 ZNF76 ZNF2 RAD21 ZNF335 GLIS2 ZNF316 FGF13-AS1 FGF13 MIR504 GC0XM138741 GC0XP138598
GH0XI138739 Promoter 0.5 EPDnew 0.3 +27.9 27904 0.1 FGF13 GC0XM138741 FGF13-AS1 GC0XP138598
GH0XI138692 Enhancer 0.2 ENCODE 0.4 -18.7 -18684 0.8 MIR504 FGF13-AS1 GC0XM138668 GC0XP138598 FGF13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FGF13-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FGF13-AS1 Gene

Genomic Locations for FGF13-AS1 Gene
chrX:138,711,452-138,716,617
(GRCh38/hg38)
Size:
5,166 bases
Orientation:
Plus strand
chrX:137,793,614-137,798,779
(GRCh37/hg19)

Genomic View for FGF13-AS1 Gene

Genes around FGF13-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF13-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF13-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF13-AS1 Gene

Proteins for FGF13-AS1 Gene

Post-translational modifications for FGF13-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF13-AS1 Gene

Domains & Families for FGF13-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF13-AS1 Gene

Function for FGF13-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF13-AS1 Gene

Localization for FGF13-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FGF13-AS1 Gene

Pathways & Interactions for FGF13-AS1 Gene

SuperPathways for FGF13-AS1 Gene

No Data Available

Interacting Proteins for FGF13-AS1 Gene

Gene Ontology (GO) - Biological Process for FGF13-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF13-AS1 Gene

Drugs & Compounds for FGF13-AS1 Gene

No Compound Related Data Available

Transcripts for FGF13-AS1 Gene

mRNA/cDNA for FGF13-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF13-AS1 Gene

FGF13 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FGF13-AS1 Gene

No ASD Table

Relevant External Links for FGF13-AS1 Gene

GeneLoc Exon Structure for
FGF13-AS1
ECgene alternative splicing isoforms for
FGF13-AS1

Expression for FGF13-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF13-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FGF13-AS1 Gene

This gene is overexpressed in Artery - Tibial (x6.1), Artery - Coronary (x4.6), and Artery - Aorta (x4.1).

SOURCE GeneReport for Unigene cluster for FGF13-AS1 Gene:

Hs.571747
genes like me logo Genes that share expression patterns with FGF13-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF13-AS1 Gene

Orthologs for FGF13-AS1 Gene

Evolution for FGF13-AS1 Gene

ENSEMBL:
Gene Tree for FGF13-AS1 (if available)
TreeFam:
Gene Tree for FGF13-AS1 (if available)

No data available for Orthologs for FGF13-AS1 Gene

Paralogs for FGF13-AS1 Gene

No data available for Paralogs for FGF13-AS1 Gene

Variants for FGF13-AS1 Gene

Sequence variations from dbSNP and Humsavar for FGF13-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1002736862 -- 138,714,273(+) C/T intron_variant
rs1003043775 -- 138,713,309(+) G/A intron_variant
rs1003785500 -- 138,715,516(+) C/T intron_variant
rs1004176573 -- 138,711,974(+) C/A upstream_transcript_variant
rs1004912017 -- 138,714,560(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for FGF13-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv525867 CNV gain 19592680

Additional Variant Information for FGF13-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF13-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FGF13-AS1 Gene

Disorders for FGF13-AS1 Gene

Additional Disease Information for FGF13-AS1

No disorders were found for FGF13-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF13-AS1 Gene

Publications for FGF13-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FGF13-AS1 Gene

Sources for FGF13-AS1 Gene

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