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Aliases for FGF13-AS1 Gene

Subcategory (RNA class) for FGF13-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FGF13-AS1 Gene

  • FGF13 Antisense RNA 1 2 3 5
  • FGF13 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for FGF13-AS1 Gene

Previous GeneCards Identifiers for FGF13-AS1 Gene

  • GC0XP137794

Summaries for FGF13-AS1 Gene

GeneCards Summary for FGF13-AS1 Gene

FGF13-AS1 (FGF13 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FGF13-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF13-AS1 Gene

Genomics for FGF13-AS1 Gene

Regulatory Elements for FGF13-AS1 Gene

Enhancers for FGF13-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH138710 0.8 ENCODE 11.2 +0.1 134 2.9 CTCF ZNF777 INSM2 ZNF76 ZNF2 RAD21 GLIS2 ZNF316 POLR2A PATZ1 MIR504 FGF13-AS1 GC0XM138741
GH0XH138692 0.2 ENCODE 0.4 -18.7 -18685 0.8 MIR504 FGF13-AS1 GC0XM138668
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF13-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FGF13-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000249110 -151 2200 CTCF ZNF777 INSM2 ZNF76 ZNF2 RAD21 GLIS2 ZNF316 POLR2A SCRT2

Genomic Locations for FGF13-AS1 Gene

Genomic Locations for FGF13-AS1 Gene
5,166 bases
Plus strand

Genomic View for FGF13-AS1 Gene

Genes around FGF13-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF13-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF13-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF13-AS1 Gene

Proteins for FGF13-AS1 Gene

Post-translational modifications for FGF13-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF13-AS1 Gene

Domains & Families for FGF13-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF13-AS1 Gene

Function for FGF13-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF13-AS1 Gene

Localization for FGF13-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FGF13-AS1 Gene

Pathways & Interactions for FGF13-AS1 Gene

SuperPathways for FGF13-AS1 Gene

No Data Available

Interacting Proteins for FGF13-AS1 Gene

Gene Ontology (GO) - Biological Process for FGF13-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FGF13-AS1 Gene

Drugs & Compounds for FGF13-AS1 Gene

No Compound Related Data Available

Transcripts for FGF13-AS1 Gene

mRNA/cDNA for FGF13-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FGF13-AS1 Gene

FGF13 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FGF13-AS1 Gene

No ASD Table

Relevant External Links for FGF13-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FGF13-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF13-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FGF13-AS1 Gene

This gene is overexpressed in Artery - Tibial (x6.1), Artery - Coronary (x4.6), and Artery - Aorta (x4.1).

SOURCE GeneReport for Unigene cluster for FGF13-AS1 Gene:

genes like me logo Genes that share expression patterns with FGF13-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF13-AS1 Gene

Orthologs for FGF13-AS1 Gene

Evolution for FGF13-AS1 Gene

Gene Tree for FGF13-AS1 (if available)
Gene Tree for FGF13-AS1 (if available)

No data available for Orthologs for FGF13-AS1 Gene

Paralogs for FGF13-AS1 Gene

No data available for Paralogs for FGF13-AS1 Gene

Variants for FGF13-AS1 Gene

Sequence variations from dbSNP and Humsavar for FGF13-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1002736862 -- 138,714,273(+) AAATT(C/T)AATCT intron-variant
rs1003043775 -- 138,713,309(+) AGTAG(A/G)AGGCT intron-variant, upstream-variant-2KB
rs1003785500 -- 138,715,516(+) TGGAG(C/T)TCATT intron-variant
rs1004176573 -- 138,711,974(+) GCTGA(A/C)GGAGC intron-variant, upstream-variant-2KB
rs1004912017 -- 138,714,560(+) GAATC(A/G)CTTGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FGF13-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv525867 CNV gain 19592680

Relevant External Links for FGF13-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FGF13-AS1 Gene

Disorders for FGF13-AS1 Gene

Relevant External Links for FGF13-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FGF13-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF13-AS1 Gene

Publications for FGF13-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for FGF13-AS1 Gene

Sources for FGF13-AS1 Gene

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