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Aliases for FGF12-AS3 Gene

Subcategory (RNA class) for FGF12-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FGF12-AS3 Gene

  • FGF12 Antisense RNA 3 2 3 5
  • FGF12 Antisense RNA 3 (Non-Protein Coding) 2

External Ids for FGF12-AS3 Gene

Previous GeneCards Identifiers for FGF12-AS3 Gene

  • GC00U933279
  • GC03P192237

Summaries for FGF12-AS3 Gene

GeneCards Summary for FGF12-AS3 Gene

FGF12-AS3 (FGF12 Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FGF12-AS3 Gene

Genomics for FGF12-AS3 Gene

Regulatory Elements for FGF12-AS3 Gene

Enhancers for FGF12-AS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G192494 0.4 ENCODE 11.4 -20.5 -20478 0.2 GATA2 FOS FGF12-AS3 GC03M192418
GH03G192513 1.1 Ensembl ENCODE 0.7 +0.1 129 1.9 PKNOX1 SIN3A ZNF76 ZBTB40 ZBTB7B GLIS2 EGR2 SP3 ELF1 REST FGF12-AS3 FGF12-AS2
GH03G192444 0.7 ENCODE 0.2 -70.1 -70148 0.2 CTCF ZNF654 TEAD1 TBL1XR1 TRIM22 MAX REST EP300 RAD21 ZNF143 FGF12-AS1 GC03M192418 FGF12-AS3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FGF12-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Location for FGF12-AS3 Gene

Chromosome:
3
Start:
192,514,844 bp from pter
End:
192,521,899 bp from pter
Size:
7,056 bases
Orientation:
Plus strand

Genomic View for FGF12-AS3 Gene

Genes around FGF12-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FGF12-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FGF12-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF12-AS3 Gene

Proteins for FGF12-AS3 Gene

Post-translational modifications for FGF12-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF12-AS3 Gene

Domains & Families for FGF12-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF12-AS3 Gene

Function for FGF12-AS3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FGF12-AS3 Gene

Localization for FGF12-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FGF12-AS3 Gene

Pathways & Interactions for FGF12-AS3 Gene

SuperPathways for FGF12-AS3 Gene

No Data Available

Interacting Proteins for FGF12-AS3 Gene

Gene Ontology (GO) - Biological Process for FGF12-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FGF12-AS3 Gene

Drugs & Compounds for FGF12-AS3 Gene

No Compound Related Data Available

Transcripts for FGF12-AS3 Gene

mRNA/cDNA for FGF12-AS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FGF12-AS3 Gene

No ASD Table

Relevant External Links for FGF12-AS3 Gene

GeneLoc Exon Structure for
FGF12-AS3
ECgene alternative splicing isoforms for
FGF12-AS3

Expression for FGF12-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FGF12-AS3 Gene

genes like me logo Genes that share expression patterns with FGF12-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FGF12-AS3 Gene

Orthologs for FGF12-AS3 Gene

Evolution for FGF12-AS3 Gene

ENSEMBL:
Gene Tree for FGF12-AS3 (if available)
TreeFam:
Gene Tree for FGF12-AS3 (if available)

No data available for Orthologs for FGF12-AS3 Gene

Paralogs for FGF12-AS3 Gene

No data available for Paralogs for FGF12-AS3 Gene

Variants for FGF12-AS3 Gene

Sequence variations from dbSNP and Humsavar for FGF12-AS3 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000181146 -- 192,514,016(+) ATTCA(A/G)TTTTT intron-variant, upstream-variant-2KB
rs1000566366 -- 192,515,039(+) TGGCT(G/T)GTCTG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001067459 -- 192,515,857(+) CTGAT(A/G)CCAAC intron-variant, upstream-variant-2KB
rs1001124957 -- 192,514,359(+) GCCGC(C/G)AGAAG intron-variant, upstream-variant-2KB
rs1001617638 -- 192,513,434(+) TTAGT(A/T)GTTTT intron-variant, upstream-variant-2KB

Relevant External Links for FGF12-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FGF12-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FGF12-AS3 Gene

Disorders for FGF12-AS3 Gene

Relevant External Links for FGF12-AS3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FGF12-AS3

No disorders were found for FGF12-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FGF12-AS3 Gene

Publications for FGF12-AS3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for FGF12-AS3 Gene

Sources for FGF12-AS3 Gene

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