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Aliases for FGF10-AS1 Gene

Subcategory (RNA class) for FGF10-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FGF10-AS1 Gene

  • FGF10 Antisense RNA 1 2 3

External Ids for FGF10-AS1 Gene

ORGUL Members for FGF10-AS1 Gene

Summaries for FGF10-AS1 Gene

GeneCards Summary for FGF10-AS1 Gene

FGF10-AS1 (FGF10 Antisense RNA 1) is an RNA Gene, and belongs to the lncRNA class.

fRNAdb sequence ontologies for FGF10-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for FGF10-AS1 Gene

Genomics for FGF10-AS1 Gene

Genomic Location for FGF10-AS1 Gene

Start:
44,388,732 bp from pter
End:
44,413,989 bp from pter
Size:
25,258 bases
Orientation:
Plus strand

Genomic View for FGF10-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FGF10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FGF10-AS1 Gene

No data available for Regulatory Elements for FGF10-AS1 Gene

Proteins for FGF10-AS1 Gene

Post-translational modifications for FGF10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FGF10-AS1 Gene

Domains for FGF10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FGF10-AS1 Gene

Function for FGF10-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FGF10-AS1 Gene

Localization for FGF10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FGF10-AS1 Gene

Pathways for FGF10-AS1 Gene

SuperPathways for FGF10-AS1 Gene

No Data Available

Interacting Proteins for FGF10-AS1 Gene

Gene Ontology (GO) - Biological Process for FGF10-AS1 Gene

None

No data available for Pathways by source for FGF10-AS1 Gene

Transcripts for FGF10-AS1 Gene

mRNA/cDNA for FGF10-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FGF10-AS1 Gene

No ASD Table

Relevant External Links for FGF10-AS1 Gene

GeneLoc Exon Structure for
FGF10-AS1
ECgene alternative splicing isoforms for
FGF10-AS1

Expression for FGF10-AS1 Gene

mRNA expression in normal human tissues for FGF10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FGF10-AS1 Gene

This gene is overexpressed in Cervix - Endocervix (5.0), Cervix - Ectocervix (4.7), and Adipose - Visceral (Omentum) (4.3).
genes like me logo Genes that share expressions with FGF10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FGF10-AS1 Gene

Orthologs for FGF10-AS1 Gene

Evolution for FGF10-AS1 Gene

ENSEMBL:
Gene Tree for FGF10-AS1 (if available)
TreeFam:
Gene Tree for FGF10-AS1 (if available)

No data available for Orthologs for FGF10-AS1 Gene

Paralogs for FGF10-AS1 Gene

No data available for Paralogs for FGF10-AS1 Gene

Variants for FGF10-AS1 Gene

Sequence variations from dbSNP and Humsavar for FGF10-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs723166 -- 44,395,913(-) TGAAA(C/T)GAAAA intron-variant
rs922850 -- 44,413,053(-) TCATA(C/T)ATTCA nc-transcript-variant
rs922851 -- 44,412,938(-) ATGGT(A/G)GGAGC nc-transcript-variant
rs922852 -- 44,412,881(-) TATTT(C/T)ACTAA nc-transcript-variant
rs973843 -- 44,406,183(-) TCATA(A/G)TTATT intron-variant

Relevant External Links for FGF10-AS1 Gene

HapMap Linkage Disequilibrium report
FGF10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FGF10-AS1 Gene

Disorders for FGF10-AS1 Gene

No disorders were found for FGF10-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for FGF10-AS1 Gene

Publications for FGF10-AS1 Gene

  1. Integrated analysis of dysregulated lncRNA expression in fetal cardiac tissues with ventricular septal defect. (PMID: 24147006) Song G. … Qian L. (PLoS ONE 2013) 2 3

Products for FGF10-AS1 Gene

Sources for FGF10-AS1 Gene

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