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Aliases & Descriptions for FGF10
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| Keratinocyte growth factor 2 2, 3 | | fibroblast growth factor 10 2 | | produced by fibroblasts of urinary bladder lamina propria 2 |
|
| | Search outside databases for aliases for FGF10 genePrevious GC identifers: GC05M044614 GC05M045481 GC05M044305 GC05M044350 |
Summaries for FGF10(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for FGF10: The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members possess broad mitogenic and cell survival activities, and are involved in a variety of biological processes, including embryonic development, cell growth, morphogenesis, tissue repair, tumor growth and invasion. This protein exhibits mitogenic activity for keratinizing epidermal cells, but essentially no activity for fibroblasts, which is similar to the biological activity of FGF7. Studies of the mouse homolog of suggested that this gene is required for embryonic epidermal morphogenesis including brain development, lung morphogenesis, and initiation of lim bud formation. This gene is also implicated to be a primary factor in the process of wound healing. [provided by RefSeq] UniProtKB/Swiss-Prot: FGF10_HUMAN, O15520Function: Could be a growth factor active in the process of wound healing. Acts as a mitogen in the lung. May act in a manner similar to FGF-7Gene Wiki entry for FGF10 |
Genomic Location for FGF10
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the FGF10 gene 
Entrez Gene cytogenetic band: 5p13-p12 Ensembl cytogenetic band: 5p12 HGNC cytogenetic band: 5p13-p12FGF10 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M044340:
(about GC identifiers)
Start:
|
44,340,831 bp from pter |
End:
|
44,424,623 bp from pter |
Size:
|
83,793 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000005.8 NT_006576.15
| Proteins for FGF10
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: FGF10_HUMAN, O15520 (See
protein sequence)Recommended Name: Fibroblast growth factor 10 precursor Size: 208 amino acids; 23436 Da
Subunit: Interacts with FGFBP1
Subcellular location: Secreted (Potential)
PDB structures from and Proteopedia :1NUN (3D)
 
Secondary accessions: Q6FHT6 Q96P59Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004456.1
ENSEMBL proteins: ENSP00000264664
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for FGF10: Assays for FGF10: | Protein
Domains/ Families for FGF10(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry O15520
ProtoNet protein and cluster: O15520 2 Blocks protein families: IPB002209 Heparin binding growth factor family signature IPB002348 IL1/HBGF family signature
UniProtKB/Swiss-Prot: FGF10_HUMAN, O15520Similarity: Belongs to the heparin-binding growth factors family | Gene Function for FGF10
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004465
Applied Biosystems Silencer® siRNAs for FGF10
Sigma-Aldrich siRNA and siRNA Panels for FGF10  Sigma-Aldrich shRNA for FGF10  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004465                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004465                                  untagged cDNA clone in CMV expression vector: NM_004465 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004465
UniProtKB/Swiss-Prot: FGF10_HUMAN, O15520Function: Could be a growth factor active in the process of wound healing. Acts as a mitogen in the lung. May act in a manner similar to FGF-7Genatlas biochemistry entry for FGF10:fibroblast growth factor 10,19kDa,essential regulator of lung and limb formation,involved in the mesenchymal cells for the initiation and growth of the mouse limb bud,triggering FGF8 expression in ectoderm and SHH expression in mesoderm15/18 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Fgf10) (see all 18
):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for FGF10
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
4 Sigma-Aldrich "Your Favorite Gene" Pathways for FGF10 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for FGF10 
5/60 Interacting proteins for FGF10 (O155201, 2 ENSP000002646643) via UniProtKB, MINT, and/or STRING (see all 60
)| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| FGFR2 | P218021, 2, ENSP000003330903 | EBI-1035684, EBI-1028658 MINT-24798 EBI-1035684, EBI-1028658 MINT-24798 STRING (score=.999) | | FGFR2 | P218021, 2, ENSP000003330903 | EBI-1035684, EBI-1028658 MINT-24798 EBI-1035684, EBI-1028658 MINT-24798 STRING (score=.999) | | FGFR2 | P218021, 2, ENSP000003330903 | EBI-1035684, EBI-1028658 MINT-24798 EBI-1035684, EBI-1028658 MINT-24798 STRING (score=.999) | | SHH | ENSP000002972613 | STRING (score=.982) | | FGFR3 | ENSP000003541703 | STRING (score=.974) | About this table
5/28 Gene Ontology (GO) biological process terms (links to tree view) (see all 28
): About this table
|
Drugs & Compounds for FGF10(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for FGF10 4 Novoseek chemical compound relationships for FGF10 gene
About this table
|
Transcripts for FGF10(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004465
Sigma-Aldrich siRNA and siRNA Panels for FGF10  Sigma-Aldrich shRNA for FGF10  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004465 REFSEQ mRNAs for FGF10 gene: NM_004465.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004465               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004465                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004465                                  untagged cDNA clone in CMV expression vector: NM_004465  Additional cDNA sequence: AB002097.1 AF411527.1 AF508782.1 AK315314.1 BC069561.1 BC105021.1 BC105023.1 BC143772.1 CR541665.1 CR541688.1 U67918.1 3 DOTS entries: DT.91752709 DT.120862189 DT.120862177 16 AceView cDNA sequences:U67918 BX471703 AB002097 BX280011 BC069561 NM_004465 CA394078 BX484361 AF411527 CR541665 AF508782 BP380072 AL603565 BX955123 CR541688 BF983177
highest scoring ESTs for FGF10:AB002097 AF411527 AF508782 AL603565 BC069561 BF983177 BX280011 U67918 BX484361 BX955123 Unigene Cluster for FGF10: Fibroblast growth factor 10 Hs.664499 [show with all ESTs]Unigene Representative Sequence: AK315314
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000264664
|
Expression for FGF10
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| FGF10 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for FGF10
1 / 2 / 3 2 probe-sets matching FGF10 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AACAAGAAGG
SOURCE GeneReport for Unigene cluster: Hs.664499
|
Orthologs for FGF10
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for FGF10 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for FGF10
ENSEMBL Gene Tree for FGF10 | Paralogs for FGF10(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for FGF10 gene
- FGF7P22 FGF222 KGFLP22
|
SNPs/Variants for FGF10(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for FGF10 (up to first 250kb)
|
Disorders & Mutations for FGF10
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602115 disorders: 180920 149730 UniProtKB/Swiss-Prot: FGF10_HUMAN, O15520
Defects in FGF10 are the cause of autosomal dominant aplasia of lacrimal and salivary glands (ALSG) [MIM:180920]. ALSG has variable expressivity, and affected individuals may have aplasia or hypoplasia of the lacrimal, parotid, submandibular and sublingual glands and absence of the lacrimal puncta. The disorder is characterized by irritable eyes, recurrent eye infections, epiphora (constant tearing) and xerostomia (dryness of the mouth), which increases the risk of dental erosion, dental caries, periodontal disease and oral infections Defects in FGF10 are a cause of lacrimo-auriculo-dento-digital syndrome (LADDS) [MIM:149730]; also known as Levy-Hollister syndrome. LADDS is a form of ectodermal dysplasia, a heterogeneous group of disorders due to abnormal development of two or more ectodermal structures. LADDS is an autosomal dominant syndrome characterized by aplastic/hypoplastic lacrimal and salivary glands and ducts, cup-shaped ears, hearing loss, hypodontia and enamel hypoplasia, and distal limb segments anomalies. In addition to these cardinal features, facial dysmorphism, malformations of the kidney and respiratory system and abnormal genitalia have been reported. Craniosynostosis and severe syndactyly are not observed10/21 Novoseek disease relationships for FGF10 gene (see all 21
)
About this table
Human Gene Mutation Database: FGF10 Human Genome Epidemiology Navigator: FGF10 (3 documents)
|
Medical News for FGF10(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for FGF10 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/171 PubMed articles for FGF10 gene (see all 171
):- Structure and expression of human fibroblast growth factor-10. (PubMed id 9287324)1, 2, 3, 4 Emoto H....Itoh N. (1997)
- Structural basis by which alternative splicing confers specificity in fibroblast growth factor receptors. (PubMed id 12591959)1, 3, 4 Yeh B.K.... Mohammadi M. (2003)
- The fibroblast growth factor binding protein is a novel interaction partner of FGF-7, FGF-10 and FGF-22 and regulates FGF activity: implications for epithelial repair. (PubMed id 15806171)1, 3, 4 Beer H.-D....Werner S. (2005)
- Mutations in different components of FGF signaling in LADD syndrome. (PubMed id 16501574)1, 3, 4 Rohmann E.... Wollnik B. (2006)
- LADD syndrome is caused by FGF10 mutations. (PubMed id 16630169)3, 4 Milunsky J.M.... Everman D.B. (2006)
- Mutations in the gene encoding fibroblast growth factor 10 are associated with aplasia of lacrimal and salivary glands. (PubMed id 15654336)3, 4 Entesarian M.... Dahl N. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- FGF-10 and its receptor exhibit bidirectional paracrine targeting to urothelial and smooth muscle cells in the lower urinary tract. (PubMed id 16597614)1, 3 Zhang D....Bassuk J.A. (2006)
- FGF-10 is expressed at low levels in the human prostate. (PubMed id 10951499)1, 3 Ropiquet F....Ittmann M. (2000)
- Investigation of FGF10 as a candidate gene in patients with anorectal malformations and exstrophy of the cloaca. (PubMed id 18587586)1, 3 Kruger V....Ludwig M. (2008)
|
Search for FGF10
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing FGF10
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing FGF10
(According to HUGE)
About This Section
| -- |
Specialized Databases showing FGF10(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for FGF10(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
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