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Aliases for FER1L6-AS1 Gene

Subcategory (RNA class) for FER1L6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FER1L6-AS1 Gene

  • FER1L6 Antisense RNA 1 2 3 4 5
  • FER1L6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C8orf54 3 4
  • Chromosome 8 Open Reading Frame 54 2
  • FER1L6 Antisense Gene Protein 1 4

External Ids for FER1L6-AS1 Gene

Previous HGNC Symbols for FER1L6-AS1 Gene

  • C8orf54

Previous GeneCards Identifiers for FER1L6-AS1 Gene

  • GC08U901575
  • GC08M124997

Summaries for FER1L6-AS1 Gene

GeneCards Summary for FER1L6-AS1 Gene

FER1L6-AS1 (FER1L6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FER1L6-AS1 Gene

Genomics for FER1L6-AS1 Gene

Regulatory Elements for FER1L6-AS1 Gene

Enhancers for FER1L6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F123155 1 Ensembl ENCODE 16.2 +883.2 883171 4.0 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 DERL1 LOC105375738 ENSG00000254249 FER1L6-AS1 ENSG00000254000 ARF1P3 LOC392268 FAM83A FAM83A-AS1 TRM-CAT1-1
GH08F123394 0.7 FANTOM5 ENCODE 16.2 +644.9 644933 3.0 CREB3L1 MLX DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF263 SP3 NFYC DERL1 LOC105375738 ARF1P3 ENSG00000254249 FER1L6-AS1 ENSG00000254000 LOC392268 WDYHV1 FAM91A1 C8orf76
GH08F123924 1.2 Ensembl ENCODE 11.4 +116.0 115981 0.4 CTCF REST RAD21 CTBP1 GATA3 JUND SMC3 CUX1 ENSG00000254249 FER1L6-AS1 TMEM65 ENSG00000254000 GC08P123918
GH08F124107 0.6 Ensembl ENCODE 11.3 -69.0 -68977 4.6 KLF1 PKNOX1 ATF1 CREB3L1 ZNF316 NFE2 CREM ZBTB20 ZNF740 ZBTB11 FER1L6-AS2 ENSG00000254249 FER1L6-AS1 TMEM65 LOC392268 GC08M124076
GH08F124194 0.8 FANTOM5 Ensembl ENCODE 11.3 -157.6 -157568 8.7 HDGF PKNOX1 ARNT SIN3A FEZF1 YBX1 ZNF2 CBX5 ZNF207 FOS TRMT12 TMEM65 NSMCE2 RNF139-AS1 RNF139 FER1L6-AS2 RNU6-756P ENSG00000254249 FER1L6-AS1 ENSG00000253106
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FER1L6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FER1L6-AS1 Gene

Chromosome:
8
Start:
123,984,138 bp from pter
End:
124,040,782 bp from pter
Size:
56,645 bases
Orientation:
Minus strand

Genomic View for FER1L6-AS1 Gene

Genes around FER1L6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FER1L6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FER1L6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FER1L6-AS1 Gene

Proteins for FER1L6-AS1 Gene

  • Protein details for FER1L6-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NA97-FEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein FER1L6-AS1
    Protein Accession:
    Q8NA97
    Secondary Accessions:
    • B2RPB9

    Protein attributes for FER1L6-AS1 Gene

    Size:
    138 amino acids
    Molecular mass:
    15156 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FER1L6-AS1 Gene

Post-translational modifications for FER1L6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FER1L6-AS1 Gene

Domains & Families for FER1L6-AS1 Gene

Protein Domains for FER1L6-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FER1L6-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FER1L6-AS1 Gene

Function for FER1L6-AS1 Gene

Phenotypes for FER1L6-AS1 Gene

genes like me logo Genes that share phenotypes with FER1L6-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FER1L6-AS1 Gene

Localization for FER1L6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FER1L6-AS1 Gene

Pathways & Interactions for FER1L6-AS1 Gene

SuperPathways for FER1L6-AS1 Gene

No Data Available

Interacting Proteins for FER1L6-AS1 Gene

Gene Ontology (GO) - Biological Process for FER1L6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FER1L6-AS1 Gene

Transcripts for FER1L6-AS1 Gene

mRNA/cDNA for FER1L6-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FER1L6-AS1 Gene

FER1L6 antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FER1L6-AS1 Gene

No ASD Table

Relevant External Links for FER1L6-AS1 Gene

GeneLoc Exon Structure for
FER1L6-AS1
ECgene alternative splicing isoforms for
FER1L6-AS1

Expression for FER1L6-AS1 Gene

mRNA expression in normal human tissues for FER1L6-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FER1L6-AS1 Gene

This gene is overexpressed in Testis (x45.7).

Protein differential expression in normal tissues from HIPED for FER1L6-AS1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FER1L6-AS1 Gene



Protein tissue co-expression partners for FER1L6-AS1 Gene

SOURCE GeneReport for Unigene cluster for FER1L6-AS1 Gene:

Hs.683919
genes like me logo Genes that share expression patterns with FER1L6-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for FER1L6-AS1 Gene

Orthologs for FER1L6-AS1 Gene

Evolution for FER1L6-AS1 Gene

ENSEMBL:
Gene Tree for FER1L6-AS1 (if available)
TreeFam:
Gene Tree for FER1L6-AS1 (if available)

No data available for Orthologs for FER1L6-AS1 Gene

Paralogs for FER1L6-AS1 Gene

No data available for Paralogs for FER1L6-AS1 Gene

Variants for FER1L6-AS1 Gene

Sequence variations from dbSNP and Humsavar for FER1L6-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs10087645 -- 124,024,539(+) atttc(A/G)ttctt intron-variant
rs10088862 -- 123,989,227(+) gctag(G/T)atttt intron-variant
rs10093700 -- 124,008,014(+) tagtg(A/T)cttgt intron-variant
rs10094301 -- 124,008,386(+) ccaat(C/T)gtaaa intron-variant
rs10095124 -- 123,995,685(+) gctct(A/G)tattt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FER1L6-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv12305n54 CNV loss 21841781
dgv7308n100 CNV loss 25217958
esv3618675 CNV loss 21293372
nsv435876 CNV deletion 17901297

Relevant External Links for FER1L6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FER1L6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FER1L6-AS1 Gene

Disorders for FER1L6-AS1 Gene

Relevant External Links for FER1L6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FER1L6-AS1

No disorders were found for FER1L6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FER1L6-AS1 Gene

Publications for FER1L6-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FER1L6-AS1 Gene

Sources for FER1L6-AS1 Gene

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