Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FER1L6-AS1 Gene

Subcategory (RNA class) for FER1L6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FER1L6-AS1 Gene

  • FER1L6 Antisense RNA 1 2 3 4 5
  • FER1L6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • C8orf54 3 4
  • Chromosome 8 Open Reading Frame 54 2
  • FER1L6 Antisense Gene Protein 1 4

External Ids for FER1L6-AS1 Gene

Previous HGNC Symbols for FER1L6-AS1 Gene

  • C8orf54

Previous GeneCards Identifiers for FER1L6-AS1 Gene

  • GC08U901575
  • GC08M124997

Summaries for FER1L6-AS1 Gene

GeneCards Summary for FER1L6-AS1 Gene

FER1L6-AS1 (FER1L6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FER1L6-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FER1L6-AS1 Gene

Genomics for FER1L6-AS1 Gene

Regulatory Elements for FER1L6-AS1 Gene

Enhancers for FER1L6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H123155 1.7 Ensembl ENCODE dbSUPER 14.6 +883.3 883271 3.8 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 PPARGC1A SSRP1 GLIS1 NBN NR2C1 FAM91A1 DERL1 LOC105375738 ENSG00000254249 FER1L6-AS1 LOC392268 ENSG00000254000 ARF1P3 FAM83A C8orf76
GH08H123394 1.5 FANTOM5 ENCODE 14.6 +644.9 644933 3 MLX DMAP1 YY1 SLC30A9 ZNF416 ZNF143 SP3 NFYC MEF2D ZNF610 FAM91A1 LOC105375738 ENSG00000254249 FER1L6-AS1 ENSG00000254000 ARF1P3 LOC392268 DERL1 WDYHV1 C8orf76
GH08H124194 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.3 -157.6 -157568 8.7 HDGF PKNOX1 ARNT SIN3A FEZF1 YBX1 ZNF2 ZBTB7B ZNF766 ZNF207 TRMT12 WASHC5 NSMCE2 TMEM65 FAM91A1 RNF139-AS1 WASHC5-AS1 ZNF572 ENSG00000253106 RNF139
GH08H124440 1.2 Ensembl ENCODE 11 -399.8 -399794 0.6 PKNOX1 NFIB SIN3A BRCA1 RAD21 RFX5 RARA GATA2 ZNF366 ZNF143 FAM91A1 FER1L6-AS1 ENSG00000254249 TRMT12 GC08P124425
GH08H124140 0.9 Ensembl ENCODE 10.8 -100.5 -100511 1.3 TBP SMAD5 GTF2E2 BATF ZNF121 POLR2A FOS RUNX3 SPI1 TMEM65 FER1L6-AS2 ENSG00000254249 FER1L6-AS1 LOC392268 GC08M124076
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FER1L6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FER1L6-AS1 Gene

Genomic Locations for FER1L6-AS1 Gene
56,645 bases
Minus strand

Genomic View for FER1L6-AS1 Gene

Genes around FER1L6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FER1L6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FER1L6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FER1L6-AS1 Gene

Proteins for FER1L6-AS1 Gene

  • Protein details for FER1L6-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein FER1L6-AS1
    Protein Accession:
    Secondary Accessions:
    • B2RPB9

    Protein attributes for FER1L6-AS1 Gene

    138 amino acids
    Molecular mass:
    15156 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FER1L6-AS1 Gene

Post-translational modifications for FER1L6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FER1L6-AS1 Gene

Domains & Families for FER1L6-AS1 Gene

Protein Domains for FER1L6-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FER1L6-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FER1L6-AS1 Gene

Function for FER1L6-AS1 Gene

Phenotypes for FER1L6-AS1 Gene

genes like me logo Genes that share phenotypes with FER1L6-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FER1L6-AS1 Gene

Localization for FER1L6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FER1L6-AS1 Gene

Pathways & Interactions for FER1L6-AS1 Gene

SuperPathways for FER1L6-AS1 Gene

No Data Available

Interacting Proteins for FER1L6-AS1 Gene

Gene Ontology (GO) - Biological Process for FER1L6-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for FER1L6-AS1 Gene

Drugs & Compounds for FER1L6-AS1 Gene

No Compound Related Data Available

Transcripts for FER1L6-AS1 Gene

mRNA/cDNA for FER1L6-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FER1L6-AS1 Gene

FER1L6 antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FER1L6-AS1 Gene

No ASD Table

Relevant External Links for FER1L6-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FER1L6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FER1L6-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FER1L6-AS1 Gene

This gene is overexpressed in Testis (x45.7).

Protein differential expression in normal tissues from HIPED for FER1L6-AS1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FER1L6-AS1 Gene

Protein tissue co-expression partners for FER1L6-AS1 Gene

SOURCE GeneReport for Unigene cluster for FER1L6-AS1 Gene:

genes like me logo Genes that share expression patterns with FER1L6-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FER1L6-AS1 Gene

Orthologs for FER1L6-AS1 Gene

Evolution for FER1L6-AS1 Gene

Gene Tree for FER1L6-AS1 (if available)
Gene Tree for FER1L6-AS1 (if available)

No data available for Orthologs for FER1L6-AS1 Gene

Paralogs for FER1L6-AS1 Gene

No data available for Paralogs for FER1L6-AS1 Gene

Variants for FER1L6-AS1 Gene

Sequence variations from dbSNP and Humsavar for FER1L6-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000036697 -- 124,001,687(+) TGGGA(C/G)AAAGA intron-variant
rs1000044054 -- 124,006,360(+) ATGCT(G/T)GTATT intron-variant
rs1000062850 -- 124,017,879(+) AGAAA(C/T)GAACA intron-variant
rs1000070603 -- 123,994,989(+) TTCTC(C/T)GGTGG intron-variant
rs1000090096 -- 124,002,009(+) TCTGA(A/G)GTCAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FER1L6-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv12305n54 CNV loss 21841781
dgv7308n100 CNV loss 25217958
esv3618675 CNV loss 21293372
nsv435876 CNV deletion 17901297

Relevant External Links for FER1L6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FER1L6-AS1 Gene

Disorders for FER1L6-AS1 Gene

Relevant External Links for FER1L6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FER1L6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FER1L6-AS1 Gene

Publications for FER1L6-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for FER1L6-AS1 Gene

Sources for FER1L6-AS1 Gene

Loading form....