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Aliases for FDX1 Gene

Aliases for FDX1 Gene

  • Ferredoxin 1 2 3
  • Adrenal Ferredoxin 3 4
  • Hepatoredoxin 3 4
  • Ferredoxin-1 3 4
  • ADX 3 4
  • Mitochondrial Adrenodoxin 3
  • Adrenodoxin 2
  • LOH11CR1D 3
  • FDX 3

External Ids for FDX1 Gene

Previous HGNC Symbols for FDX1 Gene

  • FDX

Previous GeneCards Identifiers for FDX1 Gene

  • GC11P112572
  • GC11P111771
  • GC11P110334
  • GC11P109838
  • GC11P109805
  • GC11P106225

Summaries for FDX1 Gene

Entrez Gene Summary for FDX1 Gene

  • This gene encodes a small iron-sulfur protein that transfers electrons from NADPH through ferredoxin reductase to mitochondrial cytochrome P450, involved in steroid, vitamin D, and bile acid metabolism. Pseudogenes of this functional gene are found on chromosomes 20 and 21. [provided by RefSeq, Aug 2011]

GeneCards Summary for FDX1 Gene

FDX1 (Ferredoxin 1) is a Protein Coding gene. Diseases associated with FDX1 include vitamin d-dependent rickets, type i and cerebrotendinous xanthomatosis. Among its related pathways are Infectious disease and Metabolism. GO annotations related to this gene include iron ion binding and iron-sulfur cluster binding. An important paralog of this gene is ENSG00000167807.

UniProtKB/Swiss-Prot for FDX1 Gene

  • Participates in the synthesis of thyroid hormones. Essential for the synthesis of various steroid hormones, participates in the reduction of mitochondrial cytochrome P450 for steroidogenesis. Transfers electrons from adrenodoxin reductase to CYP11A1, a cytochrome P450 that catalyzes cholesterol side-chain cleavage.

Gene Wiki entry for FDX1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FDX1 Gene

Genomics for FDX1 Gene

Regulatory Elements for FDX1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for FDX1 Gene

Chromosome:
11
Start:
110,429,883 bp from pter
End:
110,464,884 bp from pter
Size:
35,002 bases
Orientation:
Plus strand

Genomic View for FDX1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FDX1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDX1 Gene

Proteins for FDX1 Gene

  • Protein details for FDX1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P10109-ADX_HUMAN
    Recommended name:
    Adrenodoxin, mitochondrial
    Protein Accession:
    P10109
    Secondary Accessions:
    • B0YJ14
    • Q53YD6

    Protein attributes for FDX1 Gene

    Size:
    184 amino acids
    Molecular mass:
    19393 Da
    Cofactor:
    Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:49601; Note=Binds 1 [2Fe-2S] cluster.;
    Quaternary structure:
    • Interacts with CYP11A1.

    Three dimensional structures from OCA and Proteopedia for FDX1 Gene

neXtProt entry for FDX1 Gene

Proteomics data for FDX1 Gene at MOPED

Post-translational modifications for FDX1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FDX1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FDX1 Gene

Domains & Families for FDX1 Gene

Protein Domains for FDX1 Gene

Suggested Antigen Peptide Sequences for FDX1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P10109

UniProtKB/Swiss-Prot:

ADX_HUMAN :
  • Contains 1 2Fe-2S ferredoxin-type domain.
  • Belongs to the adrenodoxin/putidaredoxin family.
Domain:
  • Contains 1 2Fe-2S ferredoxin-type domain.
Family:
  • Belongs to the adrenodoxin/putidaredoxin family.
genes like me logo Genes that share domains with FDX1: view

No data available for Gene Families for FDX1 Gene

Function for FDX1 Gene

Molecular function for FDX1 Gene

GENATLAS Biochemistry:
ferredoxin,ion sulfur electron transport protein for mitochondrial P450s
UniProtKB/Swiss-Prot BiophysicochemicalProperties:
Redox potential: E(0) is -448 mV.;
UniProtKB/Swiss-Prot Function:
Participates in the synthesis of thyroid hormones. Essential for the synthesis of various steroid hormones, participates in the reduction of mitochondrial cytochrome P450 for steroidogenesis. Transfers electrons from adrenodoxin reductase to CYP11A1, a cytochrome P450 that catalyzes cholesterol side-chain cleavage.

Gene Ontology (GO) - Molecular Function for FDX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005506 iron ion binding TAS 2969697
GO:0009055 electron carrier activity IDA 21636783
GO:0051536 iron-sulfur cluster binding --
GO:0051537 2 iron, 2 sulfur cluster binding IDA 21636783
genes like me logo Genes that share ontologies with FDX1: view
genes like me logo Genes that share phenotypes with FDX1: view

Animal Model Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FDX1

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for FDX1 Gene

Localization for FDX1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for FDX1 Gene

Mitochondrion matrix.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FDX1 Gene COMPARTMENTS Subcellular localization image for FDX1 gene
Compartment Confidence
mitochondrion 4
cytosol 2
chloroplast 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for FDX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IDA --
GO:0005759 mitochondrial matrix TAS --
genes like me logo Genes that share ontologies with FDX1: view

Pathways & Interactions for FDX1 Gene

genes like me logo Genes that share pathways with FDX1: view

Gene Ontology (GO) - Biological Process for FDX1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006700 C21-steroid hormone biosynthetic process TAS --
GO:0006805 xenobiotic metabolic process TAS --
GO:0008202 steroid metabolic process TAS --
GO:0008203 cholesterol metabolic process IDA 21636783
GO:0016125 sterol metabolic process TAS --
genes like me logo Genes that share ontologies with FDX1: view

No data available for SIGNOR curated interactions for FDX1 Gene

Drugs & Compounds for FDX1 Gene

(17) Drugs for FDX1 Gene - From: NovoSeek, HMDB, and DrugBank

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Mitotane Approved Pharma Target, unknown 9
Dexamethasone Approved, Investigational Pharma Agonist 1806
Iron Approved Pharma 957
Progesterone Approved Pharma Inhibition, Pore Blocker Endogenous progesterone receptor agonist 473
Testosterone Approved, Investigational Pharma Endogenous androgen receptor agonist 453

(21) Additional Compounds for FDX1 Gene - From: NovoSeek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
1,25 DIHYDROXY VITAMIN D3
18-Hydroxycorticosterone
  • 11b,18,21-Trihydroxy-pregn-4-ene-3,20-dione
  • 18-Hydroxycorticosterone
561-65-9
25-hydroxyvitamin d
3beta-Hydroxysteroid
Carbon
genes like me logo Genes that share compounds with FDX1: view

Transcripts for FDX1 Gene

mRNA/cDNA for FDX1 Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(173) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FDX1 Gene

Ferredoxin 1:
Representative Sequences:

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FDX1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FDX1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4
SP1:
SP2:

Relevant External Links for FDX1 Gene

GeneLoc Exon Structure for
FDX1
ECgene alternative splicing isoforms for
FDX1

Expression for FDX1 Gene

mRNA expression in normal human tissues for FDX1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FDX1 Gene

This gene is overexpressed in Adrenal Gland (x21.0).

Protein differential expression in normal tissues from HIPED for FDX1 Gene

This gene is overexpressed in Nasal epithelium (23.6), Adrenal (7.5), and Fetal testis (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for FDX1 Gene



SOURCE GeneReport for Unigene cluster for FDX1 Gene Hs.744

mRNA Expression by UniProt/SwissProt for FDX1 Gene

P10109-ADX_HUMAN
Tissue specificity: Highest levels in the adrenal gland (at protein level). Also detected in kidney and testis (at protein level).
genes like me logo Genes that share expression patterns with FDX1: view

Protein tissue co-expression partners for FDX1 Gene

Primer Products

In Situ Assay Products

Orthologs for FDX1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for FDX1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FDX1 35
  • 77.59 (n)
  • 72.88 (a)
FDX1 36
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FDX1 35
  • 84.18 (n)
  • 79.1 (a)
FDX1 36
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fdx1 35
  • 77.36 (n)
  • 77.72 (a)
Fdx1 16
Fdx1 36
  • 74 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia FDX1 35
  • 99.46 (n)
  • 99.46 (a)
FDX1 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fdx1 35
  • 77.9 (n)
  • 78.26 (a)
oppossum
(Monodelphis domestica)
Mammalia FDX1 36
  • 70 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FDX1 36
  • 73 (a)
OneToOne
chicken
(Gallus gallus)
Aves FDX1 35
  • 76.25 (n)
  • 79.31 (a)
FDX1 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FDX1 36
  • 68 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia fdx1 35
  • 72.18 (n)
  • 80.99 (a)
Str.909 35
zebrafish
(Danio rerio)
Actinopterygii Dr.13680 35
fdx1 35
  • 69.05 (n)
  • 68.75 (a)
fdx1 36
  • 47 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP003212 35
  • 52.32 (n)
  • 52.32 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG1319 35
  • 61.01 (n)
  • 63.39 (a)
CG1319 36
  • 49 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes YAH1 36
  • 32 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4213 36
  • 36 (a)
OneToOne
Species with no ortholog for FDX1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FDX1 Gene

ENSEMBL:
Gene Tree for FDX1 (if available)
TreeFam:
Gene Tree for FDX1 (if available)

Paralogs for FDX1 Gene

Paralogs for FDX1 Gene

(1) SIMAP similar genes for FDX1 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for FDX1 Gene

genes like me logo Genes that share paralogs with FDX1: view

Variants for FDX1 Gene

Sequence variations from dbSNP and Humsavar for FDX1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs13075 -- 110,463,038(+) TTATT(A/G)ACCTT utr-variant-3-prime
rs920722 -- 110,455,816(+) ATAGC(A/G)TTGGA intron-variant
rs935135 -- 110,459,171(+) CCACC(A/G)GTTTG intron-variant
rs1042198 -- 110,430,109(+) GTTCC(A/C/G)GACCG utr-variant-5-prime
rs1042288 -- 110,462,884(+) TCTGT(A/G)CTAGA utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for FDX1 Gene

Variant ID Type Subtype PubMed ID
nsv898391 CNV Loss 21882294

Variation tolerance for FDX1 Gene

Residual Variation Intolerance Score: 72.71% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.69; 14.62% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FDX1 Gene

HapMap Linkage Disequilibrium report
FDX1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FDX1 Gene

Disorders for FDX1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for FDX1 Gene - From: DISEASES, NovoSeek, and GeneCards

Disorder Aliases PubMed IDs
vitamin d-dependent rickets, type i
  • 1 alpha hydroxylase deficiency
cerebrotendinous xanthomatosis
  • cholestanol storage disease
lipoid adrenal hyperplasia
  • lipoid cah
congenital adrenal insufficiency
  • p450scc deficiency
- elite association
Search FDX1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for FDX1

Genetic Association Database (GAD)
FDX1
Human Genome Epidemiology (HuGE) Navigator
FDX1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FDX1
genes like me logo Genes that share disorders with FDX1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for FDX1 Gene

Publications for FDX1 Gene

  1. Adrenal proteins bound by a reactive intermediate of mitotane. (PMID: 9118466) Cai W. … Wotring L.L. (Cancer Chemother. Pharmacol. 1997) 23 25 26 67
  2. Ferredoxin is involved in secretion of cytotoxic necrotizing factor 1 across the cytoplasmic membrane in Escherichia coli K1. (PMID: 19917710) Yu H. … Kim K.S. (Infect. Immun. 2010) 23 67
  3. Polyamines: naturally occurring small molecule modulators of electrostatic protein-protein interactions. (PMID: 19926138) Berwanger A. … Bernhardt R. (J. Inorg. Biochem. 2010) 23 67
  4. Congenital lipoid adrenal hyperplasia: functional characterization of three novel mutations in the STAR gene. (PMID: 20080861) Bens S. … Riepe F.G. (J. Clin. Endocrinol. Metab. 2010) 23 67
  5. Coexpression of CYP11B2 or CYP11B1 with adrenodoxin and adrenodoxin reductase for assessing the potency and selectivity of aldosterone synthase inhibitors. (PMID: 19622340) LaSala D. … Jeng A.Y. (Anal. Biochem. 2009) 23 67

Products for FDX1 Gene

Sources for FDX1 Gene

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