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Aliases for FDPSP4 Gene

Aliases for FDPSP4 Gene

  • Farnesyl Diphosphate Synthase Pseudogene 4 2 3 5
  • Farnesyl Diphosphate Synthase-Like 4 (Farnesyl Pyrophosphate Synthetase-Like 4) 2 3
  • Cholesterol-Repressible Protein 39B 2 3
  • Farnesyl Diphosphate Synthase (Farnesyl Pyrophosphate Synthetase, Dimethylallyltranstransferase, Geranyltranstransferase) Pseudogene 3
  • CHR39B 3
  • FDPSL4 3
  • FPSL4 3

External Ids for FDPSP4 Gene

Previous HGNC Symbols for FDPSP4 Gene

  • FPSL4
  • CHR39B
  • FDPSL4

Previous GeneCards Identifiers for FDPSP4 Gene

  • GC15M043233

Summaries for FDPSP4 Gene

GeneCards Summary for FDPSP4 Gene

FDPSP4 (Farnesyl Diphosphate Synthase Pseudogene 4) is a Pseudogene.

Additional gene information for FDPSP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FDPSP4 Gene

Genomics for FDPSP4 Gene

Regulatory Elements for FDPSP4 Gene

Enhancers for FDPSP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H042955 0.8 ENCODE 0.4 -15.9 -15896 2 BCOR HDAC1 JUN BACH1 CEBPG ZBTB40 FOSL1 ZNF316 FOXK2 ADNP TTBK2 FDPSP4 UBR1
GH15H043103 1.1 ENCODE 0.1 -165.0 -165028 3 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 DEK SP3 CCNDBP1 TTBK2 CDAN1 CATSPER2P1 ZSCAN29 UBR1 FDPSP4
GH15H043092 0.9 Ensembl ENCODE 0.1 -152.6 -152564 1 BCOR NR2F1 REST NR2F2 ZNF121 IKZF1 ZBTB33 IKZF2 CCNDBP1 TTBK2 ADAL KRT8P50 UBR1 FDPSP4
GH15H043094 0.7 ENCODE 0.1 -154.5 -154515 1 KLF1 TAL1 ZNF175 FEZF1 MNT DPF2 TCF12 ZNF316 NCOR1 SMARCA4 CCNDBP1 UBR1 FDPSP4
GH15H043086 0.6 ENCODE 0.1 -145.8 -145794 0 FOXA2 MAX REST RAD21 FOXA1 YY1 JUND ATF3 HNF4A UBR1 FDPSP4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FDPSP4 on UCSC Golden Path with GeneCards custom track

Genomic Location for FDPSP4 Gene

Chromosome:
15
Start:
42,939,253 bp from pter
End:
42,940,404 bp from pter
Size:
1,152 bases
Orientation:
Minus strand

Genomic View for FDPSP4 Gene

Genes around FDPSP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FDPSP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FDPSP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDPSP4 Gene

Proteins for FDPSP4 Gene

Post-translational modifications for FDPSP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FDPSP4 Gene

Domains & Families for FDPSP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FDPSP4 Gene

Function for FDPSP4 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FDPSP4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FDPSP4 Gene

Localization for FDPSP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FDPSP4 Gene

Pathways & Interactions for FDPSP4 Gene

SuperPathways for FDPSP4 Gene

No Data Available

Interacting Proteins for FDPSP4 Gene

Gene Ontology (GO) - Biological Process for FDPSP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FDPSP4 Gene

Drugs & Compounds for FDPSP4 Gene

(1) Drugs for FDPSP4 Gene - From: ApexBio

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Alendronate Approved Pharma Inhibition, Inhibitor Bone resorption inhibitor, Osteoclast function modifiers (important in bone metastasis) 164

(1) ApexBio Compounds for FDPSP4 Gene

Compound Action Cas Number
Alendronate Bone resorption inhibitor 121268-17-5
genes like me logo Genes that share compounds with FDPSP4: view

Drug Products

Transcripts for FDPSP4 Gene

mRNA/cDNA for FDPSP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FDPSP4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for FDPSP4 Gene

No ASD Table

Relevant External Links for FDPSP4 Gene

GeneLoc Exon Structure for
FDPSP4
ECgene alternative splicing isoforms for
FDPSP4

Expression for FDPSP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FDPSP4 Gene

mRNA differential expression in normal tissues according to GTEx for FDPSP4 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x9.8), Brain - Amygdala (x7.2), Brain - Frontal Cortex (BA9) (x7.1), Brain - Cortex (x6.5), and Brain - Hippocampus (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of FDPSP4 Gene:

FDPSP4
genes like me logo Genes that share expression patterns with FDPSP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FDPSP4 Gene

Orthologs for FDPSP4 Gene

Evolution for FDPSP4 Gene

ENSEMBL:
Gene Tree for FDPSP4 (if available)
TreeFam:
Gene Tree for FDPSP4 (if available)

No data available for Orthologs for FDPSP4 Gene

Paralogs for FDPSP4 Gene

No data available for Paralogs for FDPSP4 Gene

Variants for FDPSP4 Gene

Relevant External Links for FDPSP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FDPSP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FDPSP4 Gene

Disorders for FDPSP4 Gene

No disorders were found for FDPSP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FDPSP4 Gene

Publications for FDPSP4 Gene

  1. Dispersed family of human genes with sequence similarity to farnesyl pyrophosphate synthetase. (PMID: 2613235) Heinzmann C … Lusis AJ (Genomics 1989) 2 3 60

Products for FDPSP4 Gene

Sources for FDPSP4 Gene

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