Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FDPSP1 Gene

Aliases for FDPSP1 Gene

  • Farnesyl Diphosphate Synthase Pseudogene 1 2 3
  • Farnesyl Diphosphate Synthase-Like 1 (Farnesyl Pyrophosphate Synthetase-Like 1, Cholesterol-Repressible Protein 39A) 2 3
  • Farnesyl Diphosphate Synthase (Farnesyl Pyrophosphate Synthetase, Dimethylallyltranstransferase, Geranyltranstransferase) Pseudogene 3
  • CHR39A 3
  • FDPSL1 3
  • FPSL1 3

External Ids for FDPSP1 Gene

Previous HGNC Symbols for FDPSP1 Gene

  • CHR39A
  • FPSL1
  • FDPSL1

Summaries for FDPSP1 Gene

GeneCards Summary for FDPSP1 Gene

FDPSP1 (Farnesyl Diphosphate Synthase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FDPSP1 Gene

Genomics for FDPSP1 Gene

Genomic Location for FDPSP1 Gene

Start:
187,563,027 bp from pter
End:
187,564,175 bp from pter
Size:
1,149 bases
Orientation:
Plus strand

Genomic View for FDPSP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FDPSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FDPSP1 Gene

No data available for Regulatory Elements for FDPSP1 Gene

Proteins for FDPSP1 Gene

Post-translational modifications for FDPSP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FDPSP1 Gene

Domains for FDPSP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FDPSP1 Gene

Function for FDPSP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FDPSP1 Gene

Localization for FDPSP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FDPSP1 Gene

Pathways for FDPSP1 Gene

SuperPathways for FDPSP1 Gene

No Data Available

Interacting Proteins for FDPSP1 Gene

Gene Ontology (GO) - Biological Process for FDPSP1 Gene

None

No data available for Pathways by source for FDPSP1 Gene

Transcripts for FDPSP1 Gene

mRNA/cDNA for FDPSP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for FDPSP1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FDPSP1 Gene

No ASD Table

Relevant External Links for FDPSP1 Gene

GeneLoc Exon Structure for
FDPSP1
ECgene alternative splicing isoforms for
FDPSP1

Expression for FDPSP1 Gene

mRNA expression in normal human tissues for FDPSP1 Gene

genes like me logo Genes that share expressions with FDPSP1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FDPSP1 Gene

Orthologs for FDPSP1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for FDPSP1 Gene

Organism Taxonomy Gene Similarity Type Details
rice
(Oryza sativa)
Liliopsida Os.12161 35
Species with no ortholog for FDPSP1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FDPSP1 Gene

ENSEMBL:
Gene Tree for FDPSP1 (if available)
TreeFam:
Gene Tree for FDPSP1 (if available)

Paralogs for FDPSP1 Gene

No data available for Paralogs for FDPSP1 Gene

Variants for FDPSP1 Gene

Relevant External Links for FDPSP1 Gene

HapMap Linkage Disequilibrium report
FDPSP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FDPSP1 Gene

Disorders for FDPSP1 Gene

No disorders were found for FDPSP1 Gene.

No data available for UniProtKB/Swiss-Prot for FDPSP1 Gene

Publications for FDPSP1 Gene

  1. Dispersed family of human genes with sequence similarity to farnesyl pyrophosphate synthetase. (PMID: 2613235) Heinzmann C. … Lusis A.J. (Genomics 1989) 2 3

Products for FDPSP1 Gene

Sources for FDPSP1 Gene

Back to Top

Content