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Aliases for FCGR1A Gene

Aliases for FCGR1A Gene

  • Fc Fragment Of IgG Receptor Ia 2 3 5
  • Fc Fragment Of IgG, High Affinity Ia, Receptor For (CD64) 2 3
  • Fc Fragment Of IgG, High Affinity Ia, Receptor (CD64) 2 3
  • Fc Gamma Receptor Ia 2 3
  • IgG Fc Receptor I 3 4
  • Fc-Gamma RIA 3 4
  • Fc-Gamma RI 3 4
  • FcgammaRIa 3 4
  • IGFR1 3 4
  • FCRI 3 4
  • High Affinity Immunoglobulin Gamma Fc Receptor I 3
  • Fc-Gamma Receptor I A1 3
  • CD64 Antigen 4
  • CD64A 3
  • FCGR1 4
  • CD64 3
  • FCG1 4

External Ids for FCGR1A Gene

Previous GeneCards Identifiers for FCGR1A Gene

  • GC01P147395
  • GC01P141381
  • GC01P146529
  • GC01P146970
  • GC01P146567
  • GC01P148020

Summaries for FCGR1A Gene

Entrez Gene Summary for FCGR1A Gene

  • This gene encodes a protein that plays an important role in the immune response. This protein is a high-affinity Fc-gamma receptor. The gene is one of three related gene family members located on chromosome 1. [provided by RefSeq, Jul 2008]

GeneCards Summary for FCGR1A Gene

FCGR1A (Fc Fragment Of IgG Receptor Ia) is a Protein Coding gene. Diseases associated with FCGR1A include Cervical Adenitis and Tetrasomy 21. Among its related pathways are Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell and Toxoplasmosis. GO annotations related to this gene include signal transducer activity, downstream of receptor and IgG binding. An important paralog of this gene is FCGR1B.

UniProtKB/Swiss-Prot for FCGR1A Gene

  • High affinity receptor for the Fc region of immunoglobulins gamma. Functions in both innate and adaptive immune responses.

Gene Wiki entry for FCGR1A Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FCGR1A Gene

Genomics for FCGR1A Gene

Regulatory Elements for FCGR1A Gene

Enhancers for FCGR1A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G149746 0.7 Ensembl ENCODE 8 -34.3 -34342 0.7 CHD1 ZBTB33 EZH2 LOC102723955 FCGR1A TRN-GTT8-1 GC01M149741
GH01G149787 0.8 Ensembl ENCODE 0.4 +6.9 6926 1.6 JUND ATF3 IKZF1 KDM1A SPI1 ENSG00000233030 FCGR1A
GH01G149775 0.8 Ensembl 0.4 -5.4 -5353 1.0 HDAC1 PKNOX1 NFRKB EGR1 CEBPB HDAC8 ZNF592 POLR2H MEF2D NFIC SV2A FCGR1A TRR-CCT8-1
GH01G149792 0.8 ENCODE 0.4 +11.4 11402 1.2 GTF2F1 CTCF MXI1 ATF1 RB1 SIN3A UBTF ZIC2 RAD21 CTBP1 SV2A ENSG00000233030 FCGR1A
GH01G149768 0.5 Ensembl 0.4 -11.9 -11875 1.2 ELK1 SREBF2 SIN3A ZBTB33 TRR-CCT8-1 FCGR1A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FCGR1A on UCSC Golden Path with GeneCards custom track

Genomic Location for FCGR1A Gene

Chromosome:
1
Start:
149,781,275 bp from pter
End:
149,792,518 bp from pter
Size:
11,244 bases
Orientation:
Plus strand

Genomic View for FCGR1A Gene

Genes around FCGR1A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FCGR1A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FCGR1A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FCGR1A Gene

Proteins for FCGR1A Gene

  • Protein details for FCGR1A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P12314-FCGR1_HUMAN
    Recommended name:
    High affinity immunoglobulin gamma Fc receptor I
    Protein Accession:
    P12314
    Secondary Accessions:
    • P12315
    • Q5QNW7
    • Q92495
    • Q92663

    Protein attributes for FCGR1A Gene

    Size:
    374 amino acids
    Molecular mass:
    42632 Da
    Quaternary structure:
    • Interacts with FCERG1; forms a functional signaling complex. Interacts with FLNA; prevents FCGR1A degradation. Interacts with EPB41L2, LAT and PPL. Interacts with HCK and LYN.

    Three dimensional structures from OCA and Proteopedia for FCGR1A Gene

    Alternative splice isoforms for FCGR1A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for FCGR1A Gene

Post-translational modifications for FCGR1A Gene

  • Phosphorylated on serine residues.
  • Glycosylation at Asn59, Asn78, Asn152, Asn159, Asn163, Asn195, and isoforms=2240
  • Modification sites at PhosphoSitePlus

Other Protein References for FCGR1A Gene

Protein Products

  • Abcam proteins for FCGR1A

No data available for DME Specific Peptides for FCGR1A Gene

Domains & Families for FCGR1A Gene

Suggested Antigen Peptide Sequences for FCGR1A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P12314

UniProtKB/Swiss-Prot:

FCGR1_HUMAN :
  • Belongs to the immunoglobulin superfamily. FCGR1 family.
Family:
  • Belongs to the immunoglobulin superfamily. FCGR1 family.
genes like me logo Genes that share domains with FCGR1A: view

Function for FCGR1A Gene

Molecular function for FCGR1A Gene

GENATLAS Biochemistry:
immunoglobulin G,high affinity Fc receptor 1A,expressed by macrophages,monocytes,neutrophils
UniProtKB/Swiss-Prot Function:
High affinity receptor for the Fc region of immunoglobulins gamma. Functions in both innate and adaptive immune responses.

Gene Ontology (GO) - Molecular Function for FCGR1A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005057 signal transducer activity, downstream of receptor TAS 10879688
GO:0005515 protein binding IPI 18322202
GO:0019864 IgG binding IEA --
genes like me logo Genes that share ontologies with FCGR1A: view
genes like me logo Genes that share phenotypes with FCGR1A: view

Animal Models for FCGR1A Gene

MGI Knock Outs for FCGR1A:

Animal Model Products

CRISPR Products

miRNA for FCGR1A Gene

miRTarBase miRNAs that target FCGR1A

Inhibitory RNA Products

Clone Products

  • R&D Systems cDNA Clones for FCGR1A (Fc gamma RIA/CD64)
  • R&D Systems cDNA Clones for FCGR1A (Fc gamma RI/CD64)

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for FCGR1A Gene

Localization for FCGR1A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FCGR1A Gene

Cell membrane; Single-pass type I membrane protein. Note=Stabilized at the cell membrane through interaction with FCER1G.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FCGR1A gene
Compartment Confidence
plasma membrane 5
endosome 5
extracellular 3
nucleus 2
cytoskeleton 1
mitochondrion 1
endoplasmic reticulum 1
cytosol 1
lysosome 1

Gene Ontology (GO) - Cellular Components for FCGR1A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0030669 clathrin-coated endocytic vesicle membrane TAS --
GO:0031901 early endosome membrane TAS --
genes like me logo Genes that share ontologies with FCGR1A: view

Pathways & Interactions for FCGR1A Gene

genes like me logo Genes that share pathways with FCGR1A: view

Gene Ontology (GO) - Biological Process for FCGR1A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002479 antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent TAS --
GO:0006898 receptor-mediated endocytosis TAS --
GO:0006911 phagocytosis, engulfment TAS 10879688
GO:0006955 immune response TAS 10879688
GO:0007165 signal transduction TAS 10879688
genes like me logo Genes that share ontologies with FCGR1A: view

No data available for SIGNOR curated interactions for FCGR1A Gene

Drugs & Compounds for FCGR1A Gene

(49) Drugs for FCGR1A Gene - From: DrugBank, FDA Approved Drugs, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Abciximab Approved Pharma Target 65
Adalimumab Approved Pharma Target 494
Alefacept Approved, Withdrawn Pharma Target 40
alemtuzumab Approved, Investigational Pharma Target Therapeutic Antibodies 310
Basiliximab Approved, Investigational Pharma Target 138

(20) Additional Compounds for FCGR1A Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with FCGR1A: view

Transcripts for FCGR1A Gene

Unigene Clusters for FCGR1A Gene

Fc fragment of IgG, high affinity Ia, receptor (CD64):
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • R&D Systems cDNA Clones for FCGR1A (Fc gamma RIA/CD64)
  • R&D Systems cDNA Clones for FCGR1A (Fc gamma RI/CD64)

Alternative Splicing Database (ASD) splice patterns (SP) for FCGR1A Gene

No ASD Table

Relevant External Links for FCGR1A Gene

GeneLoc Exon Structure for
FCGR1A
ECgene alternative splicing isoforms for
FCGR1A

Expression for FCGR1A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FCGR1A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FCGR1A Gene

This gene is overexpressed in Whole Blood (x25.7).

Protein differential expression in normal tissues from HIPED for FCGR1A Gene

This gene is overexpressed in Placenta (47.1), Peripheral blood mononuclear cells (13.2), and Spleen (8.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for FCGR1A Gene



Protein tissue co-expression partners for FCGR1A Gene

NURSA nuclear receptor signaling pathways regulating expression of FCGR1A Gene:

FCGR1A

SOURCE GeneReport for Unigene cluster for FCGR1A Gene:

Hs.77424

mRNA Expression by UniProt/SwissProt for FCGR1A Gene:

P12314-FCGR1_HUMAN
Tissue specificity: Monocyte/macrophage specific.

Evidence on tissue expression from TISSUES for FCGR1A Gene

  • Blood(4.6)
  • Liver(4.2)
  • Lymph node(2.6)
  • Bone marrow(2.4)
  • Spleen(2.3)
  • Intestine(2.2)
  • Lung(2.2)
genes like me logo Genes that share expression patterns with FCGR1A: view

Primer Products

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for FCGR1A Gene

Orthologs for FCGR1A Gene

This gene was present in the common ancestor of mammals.

Orthologs for FCGR1A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 99 (a)
OneToMany
FCGR1A 34
  • 98.93 (n)
dog
(Canis familiaris)
Mammalia FCGR1A 34 35
  • 82.77 (n)
cow
(Bos Taurus)
Mammalia FCGR1A 34 35
  • 80.99 (n)
mouse
(Mus musculus)
Mammalia Fcgr1 34 16 35
  • 78.17 (n)
rat
(Rattus norvegicus)
Mammalia Fcgr1a 34
  • 77.38 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 44 (a)
ManyToMany
-- 35
  • 42 (a)
ManyToMany
-- 35
  • 39 (a)
ManyToMany
-- 35
  • 38 (a)
ManyToMany
-- 35
  • 38 (a)
ManyToMany
Species where no ortholog for FCGR1A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FCGR1A Gene

ENSEMBL:
Gene Tree for FCGR1A (if available)
TreeFam:
Gene Tree for FCGR1A (if available)

Paralogs for FCGR1A Gene

(15) SIMAP similar genes for FCGR1A Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with FCGR1A: view

Variants for FCGR1A Gene

Sequence variations from dbSNP and Humsavar for FCGR1A Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs74315310 Pathogenic 149,784,224(+) CAGGG(C/T)GAAGT intron-variant, reference, stop-gained
rs1050191 -- 149,784,109(+) AGCTC(C/T)ACACA intron-variant, reference, synonymous-codon
rs1050204 -- 149,791,362(+) AGTGG(A/G)ATTTA intron-variant, upstream-variant-2KB, reference, missense
rs1050212 -- 149,791,635(+) GGTAT(A/G)TAACT intron-variant, upstream-variant-2KB, utr-variant-3-prime
rs10670379 -- 149,785,423(+) TTTTT(-/T)GAGAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FCGR1A Gene

Variant ID Type Subtype PubMed ID
dgv73n67 CNV gain 20364138
nsv469694 CNV loss 16826518
nsv824564 CNV gain 20364138
nsv831503 CNV gain 17160897
nsv831525 CNV gain 17160897
nsv946376 CNV duplication 23825009
nsv952796 CNV duplication 24416366

Variation tolerance for FCGR1A Gene

Residual Variation Intolerance Score: 66.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.63; 31.27% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FCGR1A Gene

Human Gene Mutation Database (HGMD)
FCGR1A
SNPedia medical, phenotypic, and genealogical associations of SNPs for
FCGR1A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FCGR1A Gene

Disorders for FCGR1A Gene

MalaCards: The human disease database

(11) MalaCards diseases for FCGR1A Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
cervical adenitis
  • cervical lymphadenitis
tetrasomy 21
  • isochromosome 21
pharyngitis
  • acute sore throat
specific bursitis often of occupational origin
  • specific bursitides often of occupational origin
cerebral neuroblastoma
  • neuroblastoma of brain
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for FCGR1A

Genetic Association Database (GAD)
FCGR1A
Human Genome Epidemiology (HuGE) Navigator
FCGR1A
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FCGR1A
genes like me logo Genes that share disorders with FCGR1A: view

No data available for UniProtKB/Swiss-Prot and Genatlas for FCGR1A Gene

Publications for FCGR1A Gene

  1. Localization of FCGR1 encoding Fcgamma receptor class I in primates: molecular evidence for two pericentric inversions during the evolution of human chromosome 1. (PMID: 9763663) Maresco D.L. … Theil K.S. (Cytogenet. Cell Genet. 1998) 2 3 22 64
  2. The three genes of the human FCGR1 gene family encoding Fc gamma RI flank the centromere of chromosome 1 at 1p12 and 1q21. (PMID: 8697799) Maresco D.L. … Anderson C.L. (Cytogenet. Cell Genet. 1996) 2 3 22 64
  3. Physical and functional association of the high affinity immunoglobulin G receptor (Fc gamma RI) with the kinases Hck and Lyn. (PMID: 8064233) Wang A.V. … Geha R.S. (J. Exp. Med. 1994) 3 4 22 64
  4. Three genes for the human high affinity Fc receptor for IgG (Fc gamma RI) encode four distinct transcription products. (PMID: 1379234) Ernst L.K. … Anderson C.L. (J. Biol. Chem. 1992) 3 4 22 64
  5. Crystal structure of Fcgamma receptor I and its implication in high affinity gamma-immunoglobulin binding. (PMID: 21965667) Lu J. … Sun P.D. (J. Biol. Chem. 2011) 3 4 64

Products for FCGR1A Gene

Sources for FCGR1A Gene

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