Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FCGBP Gene

Aliases for FCGBP Gene

  • Fc Fragment Of IgG Binding Protein 2 3
  • Fcgamma-Binding Protein Antigen 3 4
  • IgG Fc Binding Protein 2 3
  • Human Fc Gamma BP 2 3
  • FcgammaBP 3 4
  • IgGFc-Binding Protein 3
  • FC(GAMMA)BP 3

External Ids for FCGBP Gene

Summaries for FCGBP Gene

GeneCards Summary for FCGBP Gene

FCGBP (Fc Fragment Of IgG Binding Protein) is a Protein Coding gene.

UniProtKB/Swiss-Prot for FCGBP Gene

  • May be involved in the maintenance of the mucosal structure as a gel-like component of the mucosa.

Gene Wiki entry for FCGBP Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FCGBP Gene

Genomics for FCGBP Gene

Genomic Location for FCGBP Gene

Start:
39,863,323 bp from pter
End:
39,934,626 bp from pter
Size:
71,304 bases
Orientation:
Minus strand

Genomic View for FCGBP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FCGBP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FCGBP Gene

Regulatory Elements for FCGBP Gene

Proteins for FCGBP Gene

  • Protein details for FCGBP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y6R7-FCGBP_HUMAN
    Recommended name:
    IgGFc-binding protein
    Protein Accession:
    Q9Y6R7
    Secondary Accessions:
    • O95784

    Protein attributes for FCGBP Gene

    Size:
    5405 amino acids
    Molecular mass:
    572017 Da
    Quaternary structure:
    • Interacts with the Fc portion of IgG and with MUC2.

neXtProt entry for FCGBP Gene

Proteomics data for FCGBP Gene at MOPED

Post-translational modifications for FCGBP Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn75, Asn91, Asn1317, Asn1743, Asn2138, Asn2518, Asn3719, Asn4145, and Asn4540

Other Protein References for FCGBP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FCGBP Gene

Domains for FCGBP Gene

UniProtKB/Swiss-Prot:

FCGBP_HUMAN
Domain:
  • The N-terminal IgGFc-binding region is primate-specific:
    • Q9Y6R7
  • Contains 12 TIL (trypsin inhibitory-like) domains.:
    • Q9Y6R7
  • Contains 13 VWFD domains.:
    • Q9Y6R7
genes like me logo Genes that share domains with FCGBP: view

No data available for Gene Families for FCGBP Gene

Function for FCGBP Gene

Molecular function for FCGBP Gene

UniProtKB/Swiss-Prot Function: May be involved in the maintenance of the mucosal structure as a gel-like component of the mucosa.

Gene Ontology (GO) - Molecular Function for FCGBP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 19432394
genes like me logo Genes that share ontologies with FCGBP: view

Phenotypes for FCGBP Gene

GenomeRNAi human phenotypes for FCGBP:
genes like me logo Genes that share phenotypes with FCGBP: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FCGBP Gene

Localization for FCGBP Gene

Subcellular locations from UniProtKB/Swiss-Prot for FCGBP Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FCGBP Gene COMPARTMENTS Subcellular localization image for FCGBP gene
Compartment Confidence
cytosol 4
extracellular 4
plasma membrane 3
mitochondrion 1
nucleus 1

Gene Ontology (GO) - Cellular Components for FCGBP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0070062 extracellular exosome IDA 19056867
genes like me logo Genes that share ontologies with FCGBP: view

Pathways for FCGBP Gene

SuperPathways for FCGBP Gene

No Data Available

Interacting Proteins for FCGBP Gene

Selected Interacting proteins: Q9Y6R7-FCGBP_HUMAN for FCGBP Gene via I2D

Symbol External ID(s) Details
MLH1

Gene Ontology (GO) - Biological Process for FCGBP Gene

None

No data available for Pathways by source for FCGBP Gene

Transcripts for FCGBP Gene

mRNA/cDNA for FCGBP Gene

Unigene Clusters for FCGBP Gene

Fc fragment of IgG binding protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FCGBP Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16a · 16b ^ 17 ^ 18a · 18b ^ 19a · 19b ^ 20a · 20b · 20c ^
SP1: - - - - - - - - -
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10: - - -
SP11:
SP12: - - - - -

ExUns: 21a · 21b ^ 22
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:

Relevant External Links for FCGBP Gene

GeneLoc Exon Structure for
FCGBP
ECgene alternative splicing isoforms for
FCGBP

Expression for FCGBP Gene

mRNA expression in normal human tissues for FCGBP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for FCGBP Gene

This gene is overexpressed in Colon - Transverse (22.4), Thyroid (6.9), and Small Intestine - Terminal Ileum (6.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FCGBP Gene

SOURCE GeneReport for Unigene cluster for FCGBP Gene Hs.111732

mRNA Expression by UniProt/SwissProt for FCGBP Gene

Q9Y6R7-FCGBP_HUMAN
Tissue specificity: Mainly expressed in placenta and colon epithelium. Expressed in thyroid, and down-regulated in thyroid carcinomas. Present in serum, with higher levels in patients with various autoimmune diseases (at protein level).
genes like me logo Genes that share expressions with FCGBP: view

Orthologs for FCGBP Gene

This gene was present in the common ancestor of chordates.

Orthologs for FCGBP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FCGBP 36
  • 98.29 (n)
  • 97.9 (a)
cow
(Bos Taurus)
Mammalia FCGBP 36
  • 77.48 (n)
  • 72.23 (a)
dog
(Canis familiaris)
Mammalia FCGBP 36
  • 77.47 (n)
  • 72.17 (a)
mouse
(Mus musculus)
Mammalia Fcgbp 36
  • 73.96 (n)
  • 70.48 (a)
Fcgbp 16
rat
(Rattus norvegicus)
Mammalia Fcgbp 36
  • 73.49 (n)
  • 69.8 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia fcgbp 36
  • 49.46 (n)
  • 39.95 (a)
Str.15640 36
zebrafish
(Danio rerio)
Actinopterygii si:dkey-65b12.6 36
  • 46.6 (n)
  • 38.97 (a)
Species with no ortholog for FCGBP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FCGBP Gene

ENSEMBL:
Gene Tree for FCGBP (if available)
TreeFam:
Gene Tree for FCGBP (if available)

Paralogs for FCGBP Gene

Selected SIMAP similar genes for FCGBP Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with FCGBP: view

No data available for Paralogs for FCGBP Gene

Variants for FCGBP Gene

Sequence variations from dbSNP and Humsavar for FCGBP Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
VAR_028903 -
VAR_028904 -
VAR_028905 -
VAR_028906 -
VAR_028907 -

Structural Variations from Database of Genomic Variants (DGV) for FCGBP Gene

Variant ID Type Subtype PubMed ID
dgv1082e1 CNV Complex 17122850
nsv9725 CNV Gain+Loss 18304495
nsv2483 CNV Loss 18451855
nsv509742 CNV Insertion 20534489
nsv510766 CNV Loss 20534489
nsv2484 CNV Insertion 18451855
nsv482218 CNV Gain 20164927
nsv176 CNV Insertion 15895083
esv21806 CNV Gain+Loss 19812545
esv2660568 CNV Deletion 23128226
esv1006063 CNV Gain 20482838
esv2718556 CNV Deletion 23290073
nsv436744 CNV Insertion 17901297
nsv471484 CNV Duplication 19718026
nsv177 CNV Loss 15895083
esv2718557 CNV Deletion 23290073
nsv442460 CNV CNV 18776908
esv1010625 CNV Loss 20482838
esv990421 CNV Gain 20482838
esv2676931 CNV Deletion 23128226
nsv2485 CNV Insertion 18451855

Relevant External Links for FCGBP Gene

HapMap Linkage Disequilibrium report
FCGBP

Disorders for FCGBP Gene

Relevant External Links for FCGBP

Genetic Association Database (GAD)
FCGBP
Human Genome Epidemiology (HuGE) Navigator
FCGBP
genes like me logo Genes that share disorders with FCGBP: view

No data available for UniProtKB/Swiss-Prot for FCGBP Gene

Publications for FCGBP Gene

  1. Differential expression of IgG Fc binding protein (FcgammaBP) in human normal thyroid tissue, thyroid adenomas and thyroid carcinomas. (PMID: 12208673) O'Donovan N. … Marti U. (J. Endocrinol. 2002) 3 4 23
  2. Human IgGFc binding protein (FcgammaBP) in colonic epithelial cells exhibits mucin-like structure. (PMID: 9182547) Harada N. … Morikawa M. (J. Biol. Chem. 1997) 2 3 4
  3. Detection of Fcgamma binding protein antigen in human sera and its relation with autoimmune diseases. (PMID: 11600203) Kobayashi K. … Morikawa M. (Immunol. Lett. 2001) 3 4
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4
  5. A proteomic analysis of human bile. (PMID: 15084671) Kristiansen T.Z. … Pandey A. (Mol. Cell. Proteomics 2004) 3 4

Products for FCGBP Gene

Sources for FCGBP Gene

Back to Top

Content