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Aliases for FCF1P11 Gene

Subcategory (RNA class) for FCF1P11 Gene

lncRNA

Aliases for FCF1P11 Gene

  • FCF1 Pseudogene 11 2 3
  • FCF1 Small Subunit (SSU) Processome Component Homolog (S. Cerevisiae) Pseudogene 11 2
  • RP11-365F18.6 5

External Ids for FCF1P11 Gene

ORGUL Members for FCF1P11 Gene

Previous GeneCards Identifiers for FCF1P11 Gene

  • GC07M138884

Summaries for FCF1P11 Gene

GeneCards Summary for FCF1P11 Gene

FCF1P11 (FCF1 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FCF1P11 Gene

Genomics for FCF1P11 Gene

Regulatory Elements for FCF1P11 Gene

Enhancers for FCF1P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G139117 2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +80.2 80192 2.3 HDGF PKNOX1 FOXA2 CREB3L1 ARNT SIN3A ZNF766 CBX5 ZNF143 FOS ZC3HAV1 FCF1P11 TTC26 UBN2 GC07M139117
GH07G139724 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -533.0 -533002 15.0 HDGF FOXA2 PKNOX1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF143 TBXAS1 HIPK2 FCF1P11 TTC26 ZC3HAV1L PARP12 KDM7A TMEM213 KIAA1549 LUC7L2
GH07G139183 0.8 ENCODE 0.4 +14.9 14924 0.4 PKNOX1 CBX3 ATF1 TBL1XR1 TCF12 CREM CEBPB MBD2 CREB3 SMARCA4 RPL37AP5 UBN2 LOC100499191 FCF1P11
GH07G139182 0.7 ENCODE 0.4 +16.7 16738 2.4 CTCF TAL1 RAD21 FOSL1 TCF12 NCOR1 FOS TRIM24 SMARCE1 ELF1 RPL37AP5 UBN2 TTC26 ZC3HAV1 LOC100499191 FCF1P11
GH07G139181 0.6 ENCODE 0.4 +18.0 17988 0.1 FOSL1 CTCF NFIC JUND ATF3 ELF1 REST RAD21 RPL37AP5 UBN2 LOC100499191 FCF1P11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FCF1P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for FCF1P11 Gene

Chromosome:
7
Start:
139,198,556 bp from pter
End:
139,199,142 bp from pter
Size:
587 bases
Orientation:
Minus strand

Genomic View for FCF1P11 Gene

Genes around FCF1P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FCF1P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FCF1P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FCF1P11 Gene

Proteins for FCF1P11 Gene

Post-translational modifications for FCF1P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FCF1P11 Gene

Domains & Families for FCF1P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FCF1P11 Gene

Function for FCF1P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FCF1P11 Gene

Localization for FCF1P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FCF1P11 Gene

Pathways & Interactions for FCF1P11 Gene

SuperPathways for FCF1P11 Gene

No Data Available

Interacting Proteins for FCF1P11 Gene

Gene Ontology (GO) - Biological Process for FCF1P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FCF1P11 Gene

Transcripts for FCF1P11 Gene

mRNA/cDNA for FCF1P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FCF1P11 Gene

No ASD Table

Relevant External Links for FCF1P11 Gene

GeneLoc Exon Structure for
FCF1P11
ECgene alternative splicing isoforms for
FCF1P11

Expression for FCF1P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FCF1P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of FCF1P11 Gene:

FCF1P11
genes like me logo Genes that share expression patterns with FCF1P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FCF1P11 Gene

Orthologs for FCF1P11 Gene

Evolution for FCF1P11 Gene

ENSEMBL:
Gene Tree for FCF1P11 (if available)
TreeFam:
Gene Tree for FCF1P11 (if available)

No data available for Orthologs for FCF1P11 Gene

Paralogs for FCF1P11 Gene

No data available for Paralogs for FCF1P11 Gene

Variants for FCF1P11 Gene

Relevant External Links for FCF1P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FCF1P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FCF1P11 Gene

Disorders for FCF1P11 Gene

No disorders were found for FCF1P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FCF1P11 Gene

Publications for FCF1P11 Gene

No publications were found for FCF1P11 Gene.

Products for FCF1P11 Gene

Sources for FCF1P11 Gene

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