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Aliases for FBXW7-AS1 Gene

Subcategory (RNA class) for FBXW7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FBXW7-AS1 Gene

  • FBXW7 Antisense RNA 1 2 3
  • Dual Endothelin-1(VEGFsp)/Angiotensin II Receptor Pseudogene 3 5
  • Dual-Endothelin1/VEGFsp Receptor 2 3
  • DEAR 3 5
  • Dual Endothelin-1(VEGFsp)/Angiotensin II Receptor 2
  • DEspR 3

External Ids for FBXW7-AS1 Gene

Summaries for FBXW7-AS1 Gene

GeneCards Summary for FBXW7-AS1 Gene

FBXW7-AS1 (FBXW7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FBXW7-AS1 Gene

Genomics for FBXW7-AS1 Gene

Regulatory Elements for FBXW7-AS1 Gene

Enhancers for FBXW7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F152327 0.7 ENCODE 0.4 -8.9 -8902 1.9 TBP ARID4B SIN3A BMI1 ZNF335 GLIS2 SCRT2 FOS EGR2 SP3 ENSG00000270750 FBXW7-AS1
GH04F152344 0.6 FANTOM5 0.4 +6.6 6565 0.4 OSR2 ZNF335 HIC1 ATF3 HLF EMSY ZNF18 FBXW7 FBXW7-AS1 GC04P152362
GH04F152348 0.4 ENCODE 0.4 +13.5 13452 5.4 TBP PKNOX1 SIN3A FEZF1 ZNF2 RAD21 ZEB1 YY1 RARA GLIS2 FBXW7-AS1 GC04P152362
GH04F152325 0.2 ENCODE 0.4 -11.6 -11632 0.2 JUND GATA3 NFIA FOS EP300 ENSG00000270750 FBXW7-AS1
GH04F152356 0.6 Ensembl 0.3 +19.5 19546 1.2 CTCF ZNF664 TEAD1 CEBPA CEBPB RAD21 GC04P152362 FBXW7-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FBXW7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FBXW7-AS1 Gene

Chromosome:
4
Start:
152,337,655 bp from pter
End:
152,338,098 bp from pter
Size:
444 bases
Orientation:
Plus strand

Genomic View for FBXW7-AS1 Gene

Genes around FBXW7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FBXW7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FBXW7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FBXW7-AS1 Gene

Proteins for FBXW7-AS1 Gene

Post-translational modifications for FBXW7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FBXW7-AS1 Gene

Domains & Families for FBXW7-AS1 Gene

Suggested Antigen Peptide Sequences for FBXW7-AS1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FBXW7-AS1 Gene

Function for FBXW7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FBXW7-AS1 Gene

Localization for FBXW7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FBXW7-AS1 Gene

Pathways & Interactions for FBXW7-AS1 Gene

SuperPathways for FBXW7-AS1 Gene

No Data Available

Interacting Proteins for FBXW7-AS1 Gene

Gene Ontology (GO) - Biological Process for FBXW7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FBXW7-AS1 Gene

Transcripts for FBXW7-AS1 Gene

mRNA/cDNA for FBXW7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FBXW7-AS1 Gene

No ASD Table

Relevant External Links for FBXW7-AS1 Gene

GeneLoc Exon Structure for
FBXW7-AS1
ECgene alternative splicing isoforms for
FBXW7-AS1

Expression for FBXW7-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FBXW7-AS1 Gene

Orthologs for FBXW7-AS1 Gene

Evolution for FBXW7-AS1 Gene

ENSEMBL:
Gene Tree for FBXW7-AS1 (if available)
TreeFam:
Gene Tree for FBXW7-AS1 (if available)

No data available for Orthologs for FBXW7-AS1 Gene

Paralogs for FBXW7-AS1 Gene

No data available for Paralogs for FBXW7-AS1 Gene

Variants for FBXW7-AS1 Gene

Sequence variations from dbSNP and Humsavar for FBXW7-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs111996158 -- 152,338,070(+) ATAGT(C/G)ACATT intron-variant, nc-transcript-variant
rs114107896 -- 152,335,670(+) AATTG(C/T)TTTTA intron-variant, upstream-variant-2KB
rs12503065 -- 152,336,105(+) CTTAG(A/C)CAATA intron-variant, upstream-variant-2KB
rs13117989 -- 152,337,039(+) TAATG(G/T)TATAT intron-variant, upstream-variant-2KB
rs140432794 -- 152,335,976(+) TAGTT(C/T)TGAGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FBXW7-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv5439n100 CNV loss 25217958
dgv5440n100 CNV loss 25217958
dgv5441n100 CNV loss 25217958
dgv5442n100 CNV loss 25217958
nsv1031970 CNV gain 25217958
nsv4553 CNV insertion 18451855
nsv516218 CNV loss 19592680

Relevant External Links for FBXW7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FBXW7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FBXW7-AS1 Gene

Disorders for FBXW7-AS1 Gene

Relevant External Links for FBXW7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FBXW7-AS1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FBXW7-AS1

No disorders were found for FBXW7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FBXW7-AS1 Gene

Publications for FBXW7-AS1 Gene

  1. Confirmation of translatability and functionality certifies the dual endothelin1/VEGFsp receptor (DEspR) protein. (PMID: 27301377) Herrera V.L. … Ruiz-Opazo N. (BMC Mol. Biol. 2016) 3 64
  2. DEspR roles in tumor vasculo-angiogenesis, invasiveness, CSC-survival and anoikis resistance: a 'common receptor coordinator' paradigm. (PMID: 24465725) Herrera V.L. … Ruiz-Opazo N. (PLoS ONE 2014) 3 64
  3. DEspR T/CATAAAA-box promoter variant decreases DEspR transcription and is associated with increased BP in Sardinian males. (PMID: 21862670) Glorioso N. … Ruiz-Opazo N. (Physiol. Genomics 2011) 3 64
  4. Association of ATP1A1 and dear single-nucleotide polymorphism haplotypes with essential hypertension: sex-specific and haplotype-specific effects. (PMID: 17446437) Glorioso N. … Ruiz-Opazo N. (Circ. Res. 2007) 3 64

Products for FBXW7-AS1 Gene

Sources for FBXW7-AS1 Gene

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