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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

FBXW7 Gene

protein-coding   GIFtS: 63
GCID: GC04M153242

F-box and WD repeat domain containing 7, E3 ubiquitin protein...

(Previous names: F-box and WD-40 domain protein 7 (archipelago homolog,...)
 Explore 35 diseases affiliated with
FBXW7 via our new
 Human Malady Compendium 
Biological research products
for FBXW7
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
F-Box And WD Repeat Domain Containing 7, E3 Ubiquitin Protein Ligase1 2     FLJ110711
FBW71 2 3     F-Box And WD Repeat Domain Containing 71
FBX301 2 3     FBW62
SEL-101 2 3     FBXO302
SEL101 2 3     Archipelago1
AGO1 2 5     F-Box Protein FBW72
CDC41 2 5     F-Box Protein SEL-102
FBXW61 2     F-Box/WD Repeat-Containing Protein 72
F-Box And WD-40 Domain Protein 7 (Archipelago Homolog, Drosophila)1 2     Homolog Of C Elegans Sel-102
F-Box Protein FBX302 3     Archipelago Homolog3
HAgo1     F-Box And WD-40 Domain-Containing Protein 73
HCdc41     

External Ids:    HGNC: 167121   Entrez Gene: 552942   Ensembl: ENSG000001096707   OMIM: 6062785   UniProtKB: Q969H03   

Export aliases for FBXW7 gene to outside databases

Previous GC identifers: GC04M154093 GC04M153631 GC04M153708 GC04M153820 GC04M153821 GC04M153600 GC04M153461 GC04M148968


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for FBXW7:
This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif,
the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs
(SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3
classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different
protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene was previously
referred to as FBX30, and belongs to the Fbws class; in addition to an F-box, this protein contains 7 tandem WD40
repeats. This protein binds directly to cyclin E and probably targets cyclin E for ubiquitin-mediated degradation.
Mutations in this gene are detected in ovarian and breast cancer cell lines, implicating the gene's potential role in
the pathogenesis of human cancers. Multiple transcript variants encoding different isoforms have been found for this
gene. (provided by RefSeq, Mar 2012)

UniProtKB/Swiss-Prot: FBXW7_HUMAN, Q969H0
Function: Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which
mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds
to phosphorylated target proteins. Involved in the degradation of cyclin-E, MYC, NOTCH1 released notch intracellular
domain (NICD), and probably PSEN1

Gene Wiki entry for FBXW7


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016354.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the FBXW7 gene promoter:
         AP-1   ATF-2   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): FBXW7 promoter sequence
   Search SABiosciences Chromatin IP Primers for FBXW7

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat FBXW7


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q31.3   Ensembl cytogenetic band:  4q31.3   HGNC cytogenetic band: 4q31.23

FBXW7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
FBXW7 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M153242:  view genomic region     (about GC identifiers)

Start:
153,242,410 bp from pter      End:
153,456,172 bp from pter
Size:
213,763 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: FBXW7_HUMAN, Q969H0 (See protein sequence)
Recommended Name: F-box/WD repeat-containing protein 7  
Size: 707 amino acids; 79663 Da
Subunit: Component of the SCF(FBXW7) complex consisting of CUL1, RBX1, SKP1 and FBXW7. Interacts with PSEN1, cyclin E,
NOTCH1 NICD, NOTCH4 NICD and SKP1. Interacts with MYC (when phosphorylated). Isoform 1 interacts with USP28, leading
to counteract ubiquitination of MYC. Isoform 4 interacts (via WD repeats) with SV40 large T antigen (via CPD region).
Forms a trimeric complex with NOTCH1 and SGK1
Subcellular location: Isoform 1: Nucleus, nucleoplasm
Subcellular location: Isoform 2: Cytoplasm
Subcellular location: Isoform 4: Nucleus, nucleolus
Subcellular location: Nucleus (By similarity)
Sequence caution: Sequence=BAA91986.1; Type=Erroneous initiation;
3 PDB 3D structures from and Proteopedia for FBXW7:
2OVP (3D)        2OVQ (3D)        2OVR (3D)    
Secondary accessions: B7ZLP9 Q68DR0 Q96A16 Q96LE0 Q96RI2 Q9NUX6
Alternative splicing: 4 isoforms:  Q969H0-1   Q969H0-2   Q969H0-3   Q969H0-4   (Incomplete sequence)

Explore the universe of human proteins at neXtProt for FBXW7: NX_Q969H0

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q969H0

  • FBXW7 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (4 alternative transcripts): 
    NP_001013433.1  NP_001243998.1  NP_060785.2  NP_361014.1  

    ENSEMBL proteins: 
     ENSP00000281708   ENSP00000296555   ENSP00000263981   ENSP00000377528  
    Reactome Protein details: Q969H0
    Human Recombinant Protein Products: 
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    Novus Biologicals FBXW7 Protein
    Novus Biologicals FBXW7 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for FBXW7

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005654nucleoplasm TAS--
    GO:0005730nucleolus IEA--
    GO:0005783endoplasmic reticulum IEA--
    GO:0005794Golgi apparatus IEA--
    GO:0019005SCF ubiquitin ligase complex IDA15103331


    FBXW7 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for FBXW7


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    FBXW7 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR019775 WD40_repeat_CS
     IPR001810 F-box_dom_cyclin-like
     IPR001680 WD40_repeat
     IPR020472 G-protein_beta_WD-40_rep
     IPR017986 WD40_repeat_dom

    Graphical View of Domain Structure for InterPro Entry Q969H0

    ProtoNet protein and cluster: Q969H0

    UniProtKB/Swiss-Prot: FBXW7_HUMAN, Q969H0
    Similarity: Contains 1 F-box domain
    Similarity: Contains 7 WD repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: FBXW7_HUMAN, Q969H0
    Function: Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which
    mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds
    to phosphorylated target proteins. Involved in the degradation of cyclin-E, MYC, NOTCH1 released notch intracellular
    domain (NICD), and probably PSEN1

    miRNA
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    miRTarBase miRNAs that target FBXW7:
    hsa-mir-128 (MIRT004757), hsa-mir-107 (MIRT004756), hsa-mir-197 (MIRT003827)

    OriGene 3'-UTR Clone (see all 3): FBXW7
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat FBXW7
    8/114 QIAGEN miScript miRNA Assays for microRNAs that regulate FBXW7 (see all 114):
    hsa-miR-194* hsa-miR-549 hsa-miR-188-5p hsa-miR-15a hsa-miR-128 hsa-miR-219-5p hsa-miR-4325 hsa-miR-3613-3p
    SwitchGear 3'UTR luciferase reporter plasmidFBXW7 3' UTR sequence
    Inhib. RNA
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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003700sequence-specific DNA binding transcription factor activity IEA--
    GO:0005515protein binding IPI--


    FBXW7 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for FBXW7:
     Increased cell death HMECs cel  Synthetic lethal with Ras  Synthetic lethal with c-Myc af 

    Animal Models:
         Mouse knock-outs for FBXW7: Fbxw7tm1Sje Fbxw7tm1Kin Fbxw7tm1.2Axbe Fbxw7tm1.1Kei
         15/16 MGI mutant phenotypes (inferred from 8 alleles(MGI details for Fbxw7) (see all 16):
     cardiovascular system  cellular  craniofacial  digestive/alimentary  embryogenesis 
     growth/size  hematopoietic system  homeostasis/metabolism  immune system  integument 
     mortality/aging  nervous system  normal  respiratory system  tumorigenesis 

    FBXW7 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/18 super-pathways (see all 18About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by NOTCH1 t(7 9)(NOTCH1:M1580_K2555) Translocation Mutant
    8/12 pathways (see all 12)
    Signaling by NOTCH1 t(7 9)(NOTCH1:M1580_K2555) Translocation Mutant1.00
    Signaling by NOTCH11.00
    Signaling by NOTCH1 PEST Domain Mutants in Cancer1.00
    Constitutive Signaling by NOTCH1 PEST Domain Mutants0.79
    Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer1.00
    Signaling by NOTCH0.77
    Signaling by NOTCH1 in Cancer1.00
    Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants0.71
    2Antigen processing: Ubiquitination & Proteasome degradation
    Antigen processing: Ubiquitination & Proteasome degradation1.00
    Polyubiquitination of substrate0.75
    Class I MHC mediated antigen processing & presentation0.83
    Ubiquitin mediated proteolysis0.36
    3Chaperonin-mediated protein folding
    Chaperonin-mediated protein folding1.00
    Association of TriC/CCT with target proteins during biosynthesis0.60
    Protein folding0.91
    4FBXW7 WD mutants do not bind NICD1
    FBXW7 WD mutants do not bind NICD11.00
    p-NICD1 PEST domain mutants do not bind FBXW71.00
    Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling1.00
    5Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway1.00
    Parkin-Ubiquitin Proteasomal System pathway0.93
    Proteolysis_Role of Parkin in the Ubiquitin-Proteasomal Pathway0.93

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/7 EMD Millipore Pathways for FBXW7 (see all 7)
        Development Notch Signaling Pathway
    Cell cycle Regulation of G1/S transition (part 1)
    Cell cycle ESR1 regulation of G1/S transition
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Putative ubiquitin pathway

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for FBXW7
        Notch Signaling
    SREBP Proteolysis

    5/7 GeneGo (Thomson Reuters) Pathways for FBXW7 (see all 7)
        Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Cell cycle ESR1 regulation of G1/S transition
    Cell cycle Regulation of G1/S transition (part 1)
    Proteolysis Putative ubiquitin pathway
    Cell cycle Role of SCF complex in cell cycle regulation

    3 BioSystems Pathways for FBXW7 
        Parkin-Ubiquitin Proteasomal System pathway
    Delta-Notch Signaling Pathway
    Notch signaling pathway

    5/25        Reactome Pathways for FBXW7 (see all 25)
        Chaperonin-mediated protein folding
    Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants
    Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling
    NOTCH1 Intracellular Domain Regulates Transcription
    FBXW7 Mutants and NOTCH1 in Cancer


    1         Kegg Pathway  (Kegg details for FBXW7):
        Ubiquitin mediated proteolysis


    FBXW7 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for FBXW7

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/118 Interacting proteins for FBXW7 (Q969H01, 2, 3 ENSP000002817084) via UniProtKB, MINT, STRING, and/or I2D (see all 118)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CUL1Q136162, 3, ENSP000003268044MINT-8399620 MINT-49913 MINT-8399514 I2D: score=9 STRING: ENSP00000326804
    NFKB2Q006532, 3, ENSP000001894444MINT-48602 MINT-47892 I2D: score=1 STRING: ENSP00000189444
    MYCP011061, 3, ENSP000003672074EBI-359574,EBI-1058440 I2D: score=6 STRING: ENSP00000367207
    ARL6IP1Q150412, 3, ENSP000003067884MINT-64199 I2D: score=5 STRING: ENSP00000306788
    LINGO1Q96FE52, 3, ENSP000003474514MINT-64690 I2D: score=5 STRING: ENSP00000347451
    About this table

    Gene Ontology (GO): 5/24 biological process terms (GO ID links to tree view) (see all 24):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001570vasculogenesis IEA--
    GO:0001944vasculature development TAS--
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0006974response to DNA damage stimulus IDA17873522
    GO:0007062sister chromatid cohesion IMP15917200


    FBXW7 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    FBXW7 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for FBXW7
    1 Novoseek chemical compound relationship for FBXW7 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glycogen 38.8 2 15150404 (2)

    Search CenterWatch for drugs/clinical trials and news about FBXW7 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for FBXW7 gene (4 alternative transcripts): 
    NM_001013415.1  NM_001257069.1  NM_018315.4  NM_033632.3  

    Unigene Clusters for FBXW7:

    F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
    Hs.561245  [show with all ESTs], Hs.717081  [show with all ESTs]
    Unigene Representative Sequences: NM_033632, NM_001257069
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000281708(uc003ims.3 uc011cii.2 uc003imt.3 uc003imu.3 uc021xsx.1 uc021xsy.1 uc021xsz.1 uc021xta.1 uc021xtb.1 uc021xtc.1)
    ENST00000296555(uc011cih.2 uc003imr.3) ENST00000263981(uc003imq.3)
    ENST00000393956

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    hsa-miR-194* hsa-miR-549 hsa-miR-188-5p hsa-miR-15a hsa-miR-128 hsa-miR-219-5p hsa-miR-4325 hsa-miR-3613-3p
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    Inhib. RNA
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat FBXW7
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    Additional cDNA sequence: 

    BC014503.1 HQ873864.1 HQ873865.1 HQ873866.1 HQ873867.1 HQ873868.1 HQ873869.1 HQ873870.1 

    7 DOTS entries:

    DT.95070871  DT.97858626  DT.443681  DT.212124  DT.100815994  DT.95070868  DT.121266504 

    24/139 AceView cDNA sequences (see all 139):

    AI991517 BM854069 AI656085 BU618580 AL705166 AF383178 AI350509 AF411972 
    BG232046 AK131383 AI452813 AI559196 AI269047 CA423513 BM930621 AI090532 
    BQ128200 AI457819 AW157489 CA867127 BX096920 CA425646 BQ673721 AA261922 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for FBXW7    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13
    SP1:              -     -                 -                             -                           
    SP2:        -     -     -                 -                             -                           
    SP3:                                      -                             -                           
    SP4:                                                                                                
    SP5:                                                                                                


    ECgene alternative splicing isoforms for FBXW7

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    FBXW7 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See FBXW7 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for FBXW7

    SOURCE GeneReport for Unigene clusters: Hs.561245 Hs.717081

    UniProtKB/Swiss-Prot: FBXW7_HUMAN, Q969H0
    Tissue specificity: Isoform 1 is widely expressed. Isoform 4 is expressed in brain

        SABiosciences Expression via Pathway-Focused PCR Array including FBXW7: 
              Ubiquitin Ligases in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for FBXW7 gene from 6/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves FBXW71 F-box and WD repeat domain containing 7 85.8(n)
    94.73(a)
      422481  XM_420447.3  XP_420447.3 
    lizard
    (Anolis carolinensis)
    Reptilia FBXW76
    --
    --
    88(a)
    74(a)
    1 ↔ 1
    possible ortholog
    5(131720029-131763625)
    GL343952.1(8855-20641)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.328372 Xenopus laevis transcribed sequence with strong similarity more 82.78(n)    AW640941.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BI881652.12   -- 79.84(n)    BI881652.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta ago3 cyclin catabolism ubiquitin-protein ligase 74(a)   3 64A12   --
    worm
    (Caenorhabditis elegans)
    Secernentea sel-106
    F-box/WD repeat-containing protein sel-10
    44(a)
    1 ↔ 1
    V(13818118-13823073)


    ENSEMBL Gene Tree for FBXW7 (if available)
    TreeFam Gene Tree for FBXW7 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for FBXW7 gene
    TRAF72  BTRC2  FBXW22  ZNF1062  FBXW112  WDR862  
    18 SIMAP similar genes for FBXW7 using alignment to 6 protein entries:     FBXW7_HUMAN (see all proteins):
    PAAF1    PF20    WDR69    CDRT1    WDR5    EIF3I
    WDR5B    FBXW11    PAFAH1B1    WDR83    WDR86    BTRC
    DKFZp781N011    GNB5    FBXW2    LOC349136    GNB2    WSB1

    FBXW7 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for FBXW7
         1 CNV: 51274
    Human Gene Mutation Database (HGMD): FBXW7
    5/24 SABiosciences Cancer Mutation PCR Assays for FBXW7 (see all 24):
    Cosmic IdAA Change
    22932p.R465C
    27055p.V504I
    22979p.S582L
    22970p.R224*
    22964p.R367*
    5/10 SABiosciences Cancer Mutation PCR Arrays containing FBXW7 (see all 10):
    Endometrial Cancer
    Cancer Comprehensive Panel 384HT
    Tumor Suppressor Panel 384HT
    Gastric Cancer 
    Liver Cancer
    2 SABiosciences qBiomarker Copy Number PCR Arrays containing FBXW7:
    Oncogenes & Tumor Suppressor Genes 384HC
    Gastric Cancer
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing FBXW7
    DNA2.0 Custom Variant and Variant Library Synthesis for FBXW7

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    FBXW7 for disorders           About GeneDecksing

    OMIM gene information: 606278    OMIM disorders: --

    20/35 diseases for FBXW7 (see all 35):    About MalaCards
    cornelia de lange syndrome    breast cancer    non-hodgkin lymphoma    hodgkin's lymphoma
    acute lymphoblastic leukemia    acute lymphocytic leukemia    lymphoblastic leukemia    lymphocytic leukemia
    familial colorectal cancer    endometrial cancer    wilms tumor    squamous cell carcinoma
    leukemia    thymoma    colorectal cancer    endometrial carcinoma
    prostate cancer    hermaphroditism    noma    acute leukemia

    8 Novoseek disease relationships for FBXW7 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    t-all 67.3 26 17575125 (4), 18485478 (3), 17646409 (2), 18185524 (1)
    allelic loss 50.5 2 14507635 (1), 17326833 (1)
    tumors 32.7 45 17326833 (7), 12183400 (3), 16131838 (3), 19420964 (2) (see all 14)
    cancer 31.4 22 16357515 (2), 15980150 (2), 17486057 (1), 19420964 (1) (see all 13)
    endometrial cancer 26.2 2 12183400 (1), 17088941 (1)
    lymphoma 16.6 2 15150404 (1), 15592418 (1)
    glioma 9.3 8 17326833 (5)
    prostate cancer 0 8 16357515 (5), 17274947 (1)

    Human Genome Epidemiology (HuGE) Navigator: FBXW7 (19 documents)

    Export disorders for FBXW7 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for FBXW7 gene, integrated from 9 sources (see all 182):
    (articles sorted by number of sources associating them with FBXW7)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A family of mammalian F-box proteins. (PubMed id 10531037)1, 2, 3 Winston J.T....Harper J.W. (1999)
    2. SEL-10 interacts with presenilin 1, facilitates its ubiquitination, and alters A-beta peptide production. (PubMed id 12354302)1, 2, 9 Li J.... Gurney M.E. (2002)
    3. The SV40 large T antigen contains a decoy phosphodegron that mediates its interactions with Fbw7/hCdc4. (PubMed id 15611062)1, 2, 9 Welcker M. and Clurman B.E. (2005)
    4. Serum- and glucocorticoid-inducible kinase 1 (SGK1) c ontrols Notch1 signaling by downregulation of protein stability through Fbw7 ub iquitin ligase. (PubMed id 21147854)1, 2 Mo J.S....Park H.S. (2011)
    5. Fbw7 and Usp28 regulate myc protein stability in response to DNA damage. (PubMed id 17873522)1, 2 Popov N....Eilers M. (2007)
    6. The ubiquitin-specific protease USP28 is required for MYC stability. (PubMed id 17558397)1, 2 Popov N....Eilers M. (2007)
    7. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    8. Phosphorylation-dependent degradation of c-Myc is mediated by the F-box protein Fbw7. (PubMed id 15103331)1, 2 Yada M....Nakayama K.I. (2004)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. Archipelago regulates cyclin E levels in Drosophila and is mutated in human cancer cell lines. (PubMed id 11565033)1, 2 Moberg K.H.... Hariharan I.K. (2001)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 55294 HGNC: 16712 AceView: FBXW7 Ensembl:ENSG00000109670 euGenes: HUgn55294
    ECgene: FBXW7 Kegg: 55294 H-InvDB: FBXW7

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for FBXW7 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for FBXW7 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for FBXW7 gene:
    Search GeneIP for patents involving FBXW7

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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