FBXO34 Gene
protein-coding GIFtS : 46
GCID: GC14 P055738
F-box protein 34 (Previous name: F-box only protein 34 )
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Aliasesfor FBXO34 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases F-Box Protein 34 1 2 Fbx341 2 F-Box Only Protein 341 2 FBX343 5 FLJ207251 Protein CGI-3012
Export aliases for FBXO34 gene to outside databases Previous GC identifers: GC14P049534 GC14P053728 GC14P054807 GC14P035900
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Summariesfor FBXO34 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for FBXO34 : Members of the F-box protein family, such as FBXO34, are characterized by an approximately 40-amino acid F-box motif. SCF complexes, formed by SKP1 (MIM 601434), cullin (see CUL1; MIM 603134), and F-box proteins, act as protein-ubiquitin ligases. F-box proteins interact with SKP1 through the F box, and they interact with ubiquitination targets through other protein interaction domains (Jin et al., 2004 (PubMed 15520277)).(supplied by OMIM, Mar 2008) UniProtKB/Swiss-Prot: FBX34_HUMAN, Q9NWN3 Function : Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex (Bysimilarity)
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Genomic Viewsfor FBXO34 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000014.8 NC_018925.1 NT_026437.12 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the FBXO34 gene promoter: HOXA9B HOXA9 Arnt Meis-1 Meis-1b Other transcription factors Search SABiosciences Chromatin IP Primers for FBXO34 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat FBXO34
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 14q22.3 Ensembl cytogenetic band: 14q22.3 HGNC cytogenetic band: 14q22.1 FBXO34 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 14 GeneLoc Exon Structure
GeneLoc location for GC14P055738: view genomic region
(about GC identifiers )
Start:
55,738,021 bp from pter
End:
55,828,636 bp from pter
Size:
90,616 bases
Orientation:
plus strand
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Proteinsfor FBXO34 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: FBX34_HUMAN, Q9NWN3 (See
protein sequence )Recommended Name: F-box only protein 34 Size : 711 amino acids; 78711 Da
Subunit : Directly interacts with SKP1 and CUL1 (By similarity)
Sequence caution : Sequence=BAA91346.1; Type=Erroneous initiation; Sequence=CAD62596.1; Type=Erroneous initiation;
Secondary accessions : Q2VPB5 Q86TY4Explore the universe of human proteins at neXtProt for FBXO34: NX_Q9NWN3 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9NWN3 FBXO34 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_060413.2 NP_689417.1 ENSEMBL proteins: ENSP00000313159 ENSP00000450877 ENSP00000394117 Human Recombinant Protein Products: FBXO34 Antibody Products: Assay Products for FBXO34:
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Protein
Domains / Familiesfor FBXO34 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
FBXO34 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q9NWN3 ProtoNet protein and cluster: Q9NWN3
UniProtKB/Swiss-Prot: FBX34_HUMAN, Q9NWN3 Similarity : Contains 1 F-box domain
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Functionfor FBXO34 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: FBX34_HUMAN, Q9NWN3 Function : Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex (Bysimilarity)
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): FBXO34 (NM_152231 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for FBXO34 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FBXO34
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FBXO34
1 GenomeRNAi human phenotype for FBXO34 :
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Pathways & Interactionsfor FBXO34 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for FBXO34 STRING Interaction
Network Preview (showing 3 interactants - click image to see more details)3 Interacting proteins for FBXO34 (Q9NWN3 2 , 3 ENSP00000313159 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table
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Drugs & Compoundsfor FBXO34 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for FBXO34 Search CenterWatch for drugs/clinical trials and news about FBXO34 / FBX34
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Transcriptsfor FBXO34 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for FBXO34 gene (2 alternative transcripts): NM_017943.3 NM_152231.1 Unigene Cluster for FBXO34:
F-box protein 34 Hs.525348 [show with all ESTs ] Unigene Representative Sequence: NM_017943 7 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000313833 (uc001xbu.3 uc010aoo.3 ) ENST00000554940 ENST00000555087 ENST00000557647 ENST00000556920 ENST00000555280 (uc001xbv.3 ) ENST00000440021 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): FBXO34 (NM_152231 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for FBXO34 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FBXO34
Additional cDNA sequence: AK000732.1 AK092873.1 AK092879.1 AK225367.1 BC063526.1 BC095482.1 BC109120.1 BC109121.1 BX248268.1 CR457249.1
8 DOTS entries : DT.215414 DT.100842638
DT.97786119 DT.100691005 DT.120786678 DT.97855373 DT.100708683 DT.100816666 8 AceView cDNA sequences :
AF531436 CN479244 AL834124 AI653349 AI653064 AI653082 AI672080 BF898625 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for FBXO34 About this scheme ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b · 4c · 4d · 4e · 4f ^ 5 SP1 :         -         -   -   -   -     SP2 :     -   -   -   -                 SP3 :     -   -   -   -   -               SP4 :           -                 SP5 :         -   -                
ECgene alternative splicing isoforms for FBXO34
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Expression for FBXO34 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section FBXO34 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: CATCTTAAAT
About this image FBXO34 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category Definitive endoderm-like cells (A scalable, suspensi... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See FBXO34 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for FBXO34 SOURCE GeneReport for Unigene cluster: Hs.525348 SABiosciences Custom PCR Arrays for FBXO34 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for FBXO34Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat FBXO34 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat FBXO34 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat FBXO34 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FBXO34
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Orthologsfor FBXO34 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for FBXO34 gene from 4/10 species (see all 10 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
FBXO341
F-box protein 34
66.04(n) 62.88(a)
 
423554 NM_001031213.1 NP_001026384.1
lizard (Anolis carolinensis)
Reptilia
FBXO346
--
52(a)
1 ↔ 1
GL343325.1(321913-325073)
tropical clawed frog (Xenopus tropicalis)
Amphibia
Str.149932
Transcribed sequence with moderate similarity to protein more
74.81(n)
 
142010871
zebrafish (Danio rerio)
Actinopterygii
wu:fb99d031
wu:fb99d03
53.63(n) 47.46(a)
 
323474 XM_002665151.1 XP_002665197.1
ENSEMBL Gene Tree for FBXO34 (if available)TreeFam Gene Tree for FBXO34 (if available)
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Paralogsfor FBXO34 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for FBXO34 gene FBXO46 2
FBXO34 for paralogs About GeneDecksing
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Genomic Variantsfor FBXO34 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 14 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for FBXO34 (55738021 - 55828636 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for FBXO34 1 CNV : 5747
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing FBXO34
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Disorders
/ Diseasesfor FBXO34 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
FBXO34 for disorders About MalaCards
FBXO34 for disorders About GeneDecksing
OMIM gene information: 609104
OMIM disorders : --Export disorders for FBXO34 gene to outside databases
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Publicationsfor FBXO34 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for FBXO34 gene integrated from 9 sources : (articles sorted by number of sources associating them with FBXO34) Utopia : connect your pdf to the dynamic world of online information
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Functional dissection of lysine deacetylases reveals t hat HDAC1 and p300 regulate AMPK. (PubMed id 22318606) 1 Lin Y.Y....Boeke J.D. (2012) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070) 1 Stelzl U.... Wanker E.E. (2005) High-throughput mapping of a dynamic signaling network in mammalian cells. (PubMed id 15761153) 1 Barrios-Rodiles M....Wrana J.L. (2005) Systematic analysis and nomenclature of mammalian F-box proteins. (PubMed id 15520277) 1 Jin J....Harper J.W. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id ) 2 Aoki H.... Hino O. (2000) Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PubMed id 8125298) 1 Maruyama K. and Sugano S. (1994)
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External Searches for FBXO34 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing FBXO34 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing FBXO34 gene
(According to HUGE )
About This Section --
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Specialized Databases showing FBXO34 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for FBXO34 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for FBXO34 gene: Search GeneIP for patents involving FBXO34 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor FBXO34 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for FBXO34 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for FBXO34 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for FBXO34 Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for FBXO34 OriGene 3'-UTR Clone for FBXO34 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for FBXO34 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for FBXO34 OriGene Custom Protein Services for FBXO34 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat FBXO34 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing FBXO34 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat FBXO34 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat FBXO34 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat FBXO34 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat FBXO34
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FBXO34 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for FBXO34
ThermoFisher Antibody for FBXO34
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat FBXO34
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Aliases for FBXO34
Databases for FBXO34
Disorders / Diseases for FBXO34
Domains / Families for FBXO34
Drugs / Compounds for FBXO34
Expression for FBXO34
Function for FBXO34
Genomic Views for FBXO34
Intellectual Property for FBXO34
Orthologs for FBXO34
Paralogs for FBXO34
Pathways / Interactions for FBXO34
Products for FBXO34
Proteins for FBXO34
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Transcripts for FBXO34
Variants for FBXO34
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