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Aliases for FBXO3-AS1 Gene

Subcategory (RNA class) for FBXO3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FBXO3-AS1 Gene

  • FBXO3 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for FBXO3-AS1 Gene

Summaries for FBXO3-AS1 Gene

GeneCards Summary for FBXO3-AS1 Gene

FBXO3-AS1 (FBXO3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FBXO3-AS1 Gene

Genomics for FBXO3-AS1 Gene

Regulatory Elements for FBXO3-AS1 Gene

Enhancers for FBXO3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G033718 1.5 Ensembl ENCODE dbSUPER 19.4 -52.4 -52426 7.3 PKNOX1 FOXA2 ATF1 ARNT SIN3A BRCA1 GATA2 FOS DEK JUNB FBXO3 FBXO3-AS1 CD59 LOC105376617 ENSG00000255272 NAT10 KIAA1549L C11orf91 TCP11L1 GC11P033706
GH11G033802 1.2 Ensembl ENCODE 22.4 +27.9 27852 1.1 PKNOX1 SIN3A GLI4 ZNF2 GLIS2 KLF7 SP3 REST ZNF610 ZNF585B FBXO3-AS1 FBXO3 ENSG00000255272 CD59 PIR47137 LOC646120
GH11G033731 1.3 ENCODE dbSUPER 11.4 -39.6 -39583 7.7 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A FEZF1 YY1 ZNF766 ZNF143 CD59 LOC105376617 FBXO3-AS1 KIAA1549L FBXO3 ENSG00000255272 ENSG00000254619 GC11P033706
GH11G033808 0.7 ENCODE 20.3 +33.7 33731 0.2 GTF2F1 CTCF PKNOX1 KLF17 RAD21 RFX5 ZNF316 ZNF143 SMC3 MAFK FBXO3-AS1 FBXO3 ENSG00000255272 ABTB2 LOC105376617 LOC105376619 ENSG00000254619
GH11G033753 1 ENCODE dbSUPER 11.8 -21.2 -21190 0.2 TBL1XR1 ZBTB40 RELA ZNF335 E2F1 ZNF316 FOXK2 EED ZSCAN29 IKZF2 FBXO3-AS1 FBXO3 ENSG00000255272 LOC105376617 KIAA1549L CD59
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FBXO3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FBXO3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000038593 -499 1601 ARID4B SIN3A ZNF48 YY1 GLIS2 SP3 SP5 YY2 REST SMARCB1

Genomic Location for FBXO3-AS1 Gene

Chromosome:
11
Start:
33,774,699 bp from pter
End:
33,775,670 bp from pter
Size:
972 bases
Orientation:
Plus strand

Genomic View for FBXO3-AS1 Gene

Genes around FBXO3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FBXO3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FBXO3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FBXO3-AS1 Gene

Proteins for FBXO3-AS1 Gene

Post-translational modifications for FBXO3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FBXO3-AS1 Gene

Domains & Families for FBXO3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FBXO3-AS1 Gene

Function for FBXO3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FBXO3-AS1 Gene

Localization for FBXO3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FBXO3-AS1 Gene

Pathways & Interactions for FBXO3-AS1 Gene

SuperPathways for FBXO3-AS1 Gene

No Data Available

Interacting Proteins for FBXO3-AS1 Gene

Gene Ontology (GO) - Biological Process for FBXO3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FBXO3-AS1 Gene

Transcripts for FBXO3-AS1 Gene

mRNA/cDNA for FBXO3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FBXO3-AS1 Gene

No ASD Table

Relevant External Links for FBXO3-AS1 Gene

GeneLoc Exon Structure for
FBXO3-AS1
ECgene alternative splicing isoforms for
FBXO3-AS1

Expression for FBXO3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FBXO3-AS1 Gene

genes like me logo Genes that share expression patterns with FBXO3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FBXO3-AS1 Gene

Orthologs for FBXO3-AS1 Gene

Evolution for FBXO3-AS1 Gene

ENSEMBL:
Gene Tree for FBXO3-AS1 (if available)
TreeFam:
Gene Tree for FBXO3-AS1 (if available)

No data available for Orthologs for FBXO3-AS1 Gene

Paralogs for FBXO3-AS1 Gene

No data available for Paralogs for FBXO3-AS1 Gene

Variants for FBXO3-AS1 Gene

Sequence variations from dbSNP and Humsavar for FBXO3-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000030172 -- 33,775,729(+) TCTCT(C/G)AATTA downstream-variant-500B, upstream-variant-2KB
rs1002271269 -- 33,774,782(+) CCCTT(C/T)TGTTG intron-variant, upstream-variant-2KB
rs1005100899 -- 33,773,536(+) TATAC(A/G)GTAGC intron-variant, upstream-variant-2KB
rs1008163619 -- 33,774,103(+) GGCAC(A/G)AGGGC intron-variant, upstream-variant-2KB
rs1008755482 -- 33,775,631(+) AAGTG(C/T)CTGGC nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FBXO3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv523356 CNV loss 19592680

Relevant External Links for FBXO3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FBXO3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FBXO3-AS1 Gene

Disorders for FBXO3-AS1 Gene

Relevant External Links for FBXO3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FBXO3-AS1

No disorders were found for FBXO3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FBXO3-AS1 Gene

Publications for FBXO3-AS1 Gene

No publications were found for FBXO3-AS1 Gene.

Products for FBXO3-AS1 Gene

Sources for FBXO3-AS1 Gene

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