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Aliases for FBXO22-AS1 Gene

Subcategory (RNA class) for FBXO22-AS1 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for FBXO22-AS1 Gene

  • FBXO22 Antisense RNA 1 2 3
  • FISTC1 Opposite Strand (Non-Protein Coding) 2 3
  • FBXO22 Opposite Strand (Non-Protein Coding) 2 3
  • FBXO22 Antisense RNA 1 (Non-Protein Coding) 2 3
  • F-Box Only Protein 22 Opposite Strand 3
  • F-Box Protein 22 Opposite Strand 3
  • Non-Protein Coding RNA 53 2
  • NCRNA00053 3
  • FISTC1OS 3
  • HsT18082 3
  • FBXO22OS 3

External Ids for FBXO22-AS1 Gene

ORGUL Members for FBXO22-AS1 Gene

Previous HGNC Symbols for FBXO22-AS1 Gene

  • FBXO22OS

Previous GeneCards Identifiers for FBXO22-AS1 Gene

  • GC15M076226

Summaries for FBXO22-AS1 Gene

GeneCards Summary for FBXO22-AS1 Gene

FBXO22-AS1 (FBXO22 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FBXO22-AS1 Gene

Genomics for FBXO22-AS1 Gene

Regulatory Elements for FBXO22-AS1 Gene

Enhancers for FBXO22-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G075921 1 Ensembl ENCODE 0.4 +10.6 10616 1.3 CTCF SIN3A MAX ZNF384 RAD21 GATA3 EGR1 SCRT2 SMC3 CREM FBXO22-AS1 FBXO22
GH15G075946 0.6 ENCODE 0.4 -14.2 -14212 1.4 PKNOX1 BHLHE40 PBX2 SP2 WT1 NFE2L2 SP7 FBXO22 NRG4 TMEM266 UBE2Q2 MIR631 ENSG00000260685 FBXO22-AS1
GH15G075945 0.5 Ensembl 0.4 -13.1 -13050 0.4 FOS MYC EGR2 NRG4 TMEM266 ENSG00000260685 FBXO22-AS1
GH15G075925 0.4 FANTOM5 0.4 +7.5 7452 0.0 SPI1 FBXO22-AS1 FBXO22
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FBXO22-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FBXO22-AS1 Gene

Chromosome:
15
Start:
75,932,683 bp from pter
End:
75,933,130 bp from pter
Size:
448 bases
Orientation:
Minus strand

Genomic View for FBXO22-AS1 Gene

Genes around FBXO22-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FBXO22-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FBXO22-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FBXO22-AS1 Gene

Proteins for FBXO22-AS1 Gene

Post-translational modifications for FBXO22-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FBXO22-AS1 Gene

Domains & Families for FBXO22-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FBXO22-AS1 Gene

Function for FBXO22-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FBXO22-AS1 Gene

Localization for FBXO22-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FBXO22-AS1 Gene

Pathways & Interactions for FBXO22-AS1 Gene

SuperPathways for FBXO22-AS1 Gene

No Data Available

Interacting Proteins for FBXO22-AS1 Gene

Gene Ontology (GO) - Biological Process for FBXO22-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FBXO22-AS1 Gene

Drugs & Compounds for FBXO22-AS1 Gene

No Compound Related Data Available

Transcripts for FBXO22-AS1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FBXO22-AS1 Gene

No ASD Table

Relevant External Links for FBXO22-AS1 Gene

GeneLoc Exon Structure for
FBXO22-AS1
ECgene alternative splicing isoforms for
FBXO22-AS1

No data available for mRNA/cDNA for FBXO22-AS1 Gene

Expression for FBXO22-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FBXO22-AS1 Gene

Orthologs for FBXO22-AS1 Gene

No data available for Orthologs and Evolution for FBXO22-AS1 Gene

Paralogs for FBXO22-AS1 Gene

No data available for Paralogs for FBXO22-AS1 Gene

Variants for FBXO22-AS1 Gene

Sequence variations from dbSNP and Humsavar for FBXO22-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1002477344 -- 75,934,280(+) CCATT(A/G)TAGAA nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1004422549 -- 75,933,621(+) TACTT(A/C)TTTGA nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime
rs1006089794 -- 75,935,077(+) AAGGG(A/T)AAAGT nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs1008261241 -- 75,934,904(+) CAAAT(C/T)AATAC nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs1008313506 -- 75,934,525(+) CTTTT(C/T)TGTCA nc-transcript-variant, upstream-variant-2KB, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for FBXO22-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv2622n100 CNV gain 25217958
esv2749895 CNV deletion 23290073
esv2749898 CNV deletion 23290073
esv3636933 CNV gain 21293372
nsv1044733 CNV loss 25217958
nsv1116463 OTHER inversion 24896259

Relevant External Links for FBXO22-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FBXO22-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FBXO22-AS1 Gene

Disorders for FBXO22-AS1 Gene

Relevant External Links for FBXO22-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FBXO22-AS1

No disorders were found for FBXO22-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FBXO22-AS1 Gene

Publications for FBXO22-AS1 Gene

  1. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3 64

Products for FBXO22-AS1 Gene

Sources for FBXO22-AS1 Gene

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