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Aliases for FBXL19-AS1 Gene

Subcategory (RNA class) for FBXL19-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FBXL19-AS1 Gene

  • FBXL19 Antisense RNA 1 (Head To Head) 2 3
  • FBXL19 Antisense RNA 1 (Non-Protein Coding) 2 3
  • FBXL19 Antisense RNA 1 2 4
  • NCRNA00095 3 4
  • FBXL19 Antisense Gene Protein 1 4
  • Non-Protein Coding RNA 95 2

External Ids for FBXL19-AS1 Gene

ORGUL Members for FBXL19-AS1 Gene

Previous Symbols for FBXL19-AS1 Gene

  • NCRNA00095

Summaries for FBXL19-AS1 Gene

GeneCards Summary for FBXL19-AS1 Gene

FBXL19-AS1 (FBXL19 Antisense RNA 1 (Head To Head)) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FBXL19-AS1 Gene

Genomics for FBXL19-AS1 Gene

Genomic Location for FBXL19-AS1 Gene

Start:
30,919,319 bp from pter
End:
30,923,269 bp from pter
Size:
3,951 bases
Orientation:
Minus strand

Genomic View for FBXL19-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FBXL19-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FBXL19-AS1 Gene

No data available for Regulatory Elements for FBXL19-AS1 Gene

Proteins for FBXL19-AS1 Gene

  • Protein details for FBXL19-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q494R0-FBAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein FBXL19-AS1
    Protein Accession:
    Q494R0
    Secondary Accessions:
    • Q3KR42
    • Q8NAQ9

    Protein attributes for FBXL19-AS1 Gene

    Size:
    122 amino acids
    Molecular mass:
    13218 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FBXL19-AS1 Gene

Proteomics data for FBXL19-AS1 Gene at MOPED

Post-translational modifications for FBXL19-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FBXL19-AS1 Gene

Domains for FBXL19-AS1 Gene

Gene Families for FBXL19-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for FBXL19-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FBXL19-AS1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FBXL19-AS1 Gene

Function for FBXL19-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FBXL19-AS1 Gene

Localization for FBXL19-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FBXL19-AS1 Gene

Pathways for FBXL19-AS1 Gene

SuperPathways for FBXL19-AS1 Gene

No Data Available

Interacting Proteins for FBXL19-AS1 Gene

Gene Ontology (GO) - Biological Process for FBXL19-AS1 Gene

None

No data available for Pathways by source for FBXL19-AS1 Gene

Transcripts for FBXL19-AS1 Gene

mRNA/cDNA for FBXL19-AS1 Gene

(1) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(12) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FBXL19-AS1 Gene

FBXL19 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FBXL19-AS1 Gene

No ASD Table

Relevant External Links for FBXL19-AS1 Gene

GeneLoc Exon Structure for
FBXL19-AS1
ECgene alternative splicing isoforms for
FBXL19-AS1

Expression for FBXL19-AS1 Gene

mRNA expression in normal human tissues for FBXL19-AS1 Gene

SOURCE GeneReport for Unigene cluster for FBXL19-AS1 Gene Hs.711535

genes like me logo Genes that share expressions with FBXL19-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FBXL19-AS1 Gene

Orthologs for FBXL19-AS1 Gene

Evolution for FBXL19-AS1 Gene

ENSEMBL:
Gene Tree for FBXL19-AS1 (if available)
TreeFam:
Gene Tree for FBXL19-AS1 (if available)

No data available for Orthologs for FBXL19-AS1 Gene

Paralogs for FBXL19-AS1 Gene

No data available for Paralogs for FBXL19-AS1 Gene

Variants for FBXL19-AS1 Gene

Sequence variations from dbSNP and Humsavar for FBXL19-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs4386151 -- 30,919,408(-) catga(A/G)aattg nc-transcript-variant
rs7199908 -- 30,919,896(+) gtggg(G/T)ttttt nc-transcript-variant
rs9319588 -- 30,919,662(+) CAGGA(C/T)TTTTC nc-transcript-variant
rs12930657 -- 30,920,647(+) TGCCT(C/T)AGCCT nc-transcript-variant
rs12934156 -- 30,918,865(+) tcttc(C/T)tcttc downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for FBXL19-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv905729 CNV Loss 21882294
nsv905733 CNV Loss 21882294
nsv833189 CNV Loss 17160897
dgv35n68 CNV Loss 17160897
dgv2670n71 CNV Loss 21882294
dgv2671n71 CNV Loss 21882294
nsv457483 CNV Loss 19166990
nsv905738 CNV Loss 21882294

Relevant External Links for FBXL19-AS1 Gene

HapMap Linkage Disequilibrium report
FBXL19-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FBXL19-AS1 Gene

Disorders for FBXL19-AS1 Gene

No disorders were found for FBXL19-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for FBXL19-AS1 Gene

Publications for FBXL19-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Purification of CpG islands using a methylated DNA binding column. (PMID: 8012384) Cross S.H. … Bird A.P. (Nat. Genet. 1994) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FBXL19-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FBXL19-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FBXL19-AS1
    • Block miRNA regulation of FBXL19-AS1 using miScript Target Protectors

    Sources for FBXL19-AS1 Gene

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