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Aliases for FAUP3 Gene

Subcategory (RNA class) for FAUP3 Gene

lncRNA

Aliases for FAUP3 Gene

  • FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 3 2 3
  • FBR-MuSV-Associated Ubiquitously Expressed (Fox Derived) Pseudogene 3 2 3
  • Ribosomal Protein S30 Pseudogene 3
  • RP11-713C19.1 5
  • RPS30_1_539 3

External Ids for FAUP3 Gene

ORGUL Members for FAUP3 Gene

Previous GeneCards Identifiers for FAUP3 Gene

  • GC04U901015
  • GC04P189028

Summaries for FAUP3 Gene

GeneCards Summary for FAUP3 Gene

FAUP3 (FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAUP3 Gene

Genomics for FAUP3 Gene

Regulatory Elements for FAUP3 Gene

Enhancers for FAUP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F188106 1.3 FANTOM5 ENCODE 0.8 +2.8 2822 6.1 STAT1 JUN TEAD4 CEBPB MAX EP300 GTF3C2 JUND GATA3 POLR2A TRIML2 ZFP42 LOC105377606 FAUP3
GH04F188031 1.1 Ensembl ENCODE 0.2 -74.2 -74243 1.3 POU5F1 ZFP42 FAUP3
GH04F188023 0.7 ENCODE 0.2 -82.7 -82707 0.2 ZFP42 FAUP3
GH04F188021 0.5 ENCODE 0.2 -84.2 -84151 2.6 ZFP42 FAUP3
GH04F188016 0.6 ENCODE 0.2 -89.6 -89614 0.5 POLR2A ZFP42 FAUP3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAUP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAUP3 Gene

Chromosome:
4
Start:
188,106,558 bp from pter
End:
188,106,914 bp from pter
Size:
357 bases
Orientation:
Plus strand

Genomic View for FAUP3 Gene

Genes around FAUP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAUP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAUP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAUP3 Gene

Proteins for FAUP3 Gene

Post-translational modifications for FAUP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAUP3 Gene

Domains & Families for FAUP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAUP3 Gene

Function for FAUP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAUP3 Gene

Localization for FAUP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAUP3 Gene

Pathways & Interactions for FAUP3 Gene

SuperPathways for FAUP3 Gene

No Data Available

Interacting Proteins for FAUP3 Gene

Gene Ontology (GO) - Biological Process for FAUP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAUP3 Gene

Transcripts for FAUP3 Gene

mRNA/cDNA for FAUP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAUP3 Gene

No ASD Table

Relevant External Links for FAUP3 Gene

GeneLoc Exon Structure for
FAUP3
ECgene alternative splicing isoforms for
FAUP3

Expression for FAUP3 Gene

mRNA expression in normal human tissues for FAUP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of FAUP3 Gene:

FAUP3
genes like me logo Genes that share expression patterns with FAUP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAUP3 Gene

Orthologs for FAUP3 Gene

Evolution for FAUP3 Gene

ENSEMBL:
Gene Tree for FAUP3 (if available)
TreeFam:
Gene Tree for FAUP3 (if available)

No data available for Orthologs for FAUP3 Gene

Paralogs for FAUP3 Gene

No data available for Paralogs for FAUP3 Gene

Variants for FAUP3 Gene

Relevant External Links for FAUP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAUP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAUP3 Gene

Disorders for FAUP3 Gene

Relevant External Links for FAUP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAUP3

No disorders were found for FAUP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAUP3 Gene

Publications for FAUP3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for FAUP3 Gene

Sources for FAUP3 Gene

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