Aliases for FAUP1 Gene
Aliases for FAUP1 Gene
- FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 1 2 3 5
- FBR-MuSV-Associated Ubiquitously Expressed (Fox Derived) Pseudogene 1 2 3
- Ubiquitin-Like Protein Fubi And Ribosomal Protein S30 Precursor Pseudogene 1 3
- FBR-MuSV-Associated Ubiquitously Expressed Gene Pseudogene 1 3
- Ubiquitin-Like-S30 Fusion Protein Pseudogene 1 3
- RPS30_2_1613 3
- FAU1P 3
External Ids for FAUP1 Gene
- HGNC: 17984
- Entrez Gene: 140623
- Ensembl: ENSG00000235297
Previous GeneCards Identifiers for FAUP1 Gene
- GC18U990073
- GC18M071842
- GC18M070206
- GC18M070208
- GC18M072058
Summaries for FAUP1 Gene
GeneCards Summary for FAUP1 Gene
FAUP1 (FAU, Ubiquitin Like And Ribosomal Protein S30 Fusion Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAUP1 Gene
Genomics for FAUP1 Gene
Regulatory Elements for FAUP1 Gene
Enhancers for FAUP1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH18G074407 | 0.7 | Ensembl ENCODE | 0.4 | -17.6 | -17591 | 0.9 | SCRT1 SCRT2 | LINC01922 FAUP1 |
| GH18G074368 | 0.8 | ENCODE | 0.3 | +20.7 | 20744 | 2.2 | MLX ARID4B DMAP1 ZNF48 ZBTB40 RAD21 YY1 GATA4 THAP11 HMG20B | CNDP1 CYB5A FAUP1 C18orf63 |
| GH18G074395 | 0.5 | ENCODE | 0.4 | -6.1 | -6061 | 1.5 | PRDM6 HLF MAX HNF4A NFE2L2 | FAUP1 LINC01922 |
| GH18G074350 | 0.6 | ENCODE | 0.3 | +38.9 | 38948 | 1.3 | ELF3 BHLHE40 CEBPB FOS MAFK SPI1 | CYB5A C18orf63 FAUP1 |
| GH18G074353 | 0.6 | ENCODE | 0.3 | +37.0 | 37033 | 0.2 | ELF3 CTCF ZNF654 SAP130 REST RAD21 FOXA1 TEAD3 MIER3 SMC3 | C18orf63 FAUP1 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around FAUP1 on UCSC Golden Path with GeneCards custom track
Promoters for FAUP1 Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|---|---|---|
| ENSR00000104972 | 212 | 399 |
Regulatory Element Products
Genomic Location for FAUP1 Gene
- Chromosome:
- 18
- Start:
- 74,389,823 bp from pter
- End:
- 74,390,413 bp from pter
- Size:
- 591 bases
- Orientation:
- Minus strand
Genomic View for FAUP1 Gene
Genes around FAUP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q22.3 by Ensembl
- 18q22.3 by Entrez Gene
- 18q22.3 by HGNC
FAUP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for FAUP1 Gene
Proteins for FAUP1 Gene
Post-translational modifications for FAUP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for FAUP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAUP1
- Origene Custom Protein Services for FAUP1
- Search GeneTex for Proteins for FAUP1
Assay Products
No data available for DME Specific Peptides for FAUP1 Gene
Domains & Families for FAUP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAUP1 Gene
Function for FAUP1 Gene
Phenotypes for FAUP1 Gene
- GenomeRNAi human phenotypes for FAUP1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for FAUP1
CRISPR Products
- Browse CRISPR knockouts for FAUP1
miRNA Products
- Search ViGene Biosciences for FAUP1
Inhibitory RNA Products
- Search ViGene Biosciences for FAUP1
Cell Line Products
- Search ViGene Biosciences for FAUP1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAUP1 Gene
Localization for FAUP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAUP1 Gene
Transcripts for FAUP1 Gene
mRNA/cDNA for FAUP1 Gene
- (1) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for FAUP1
miRNA Products
- Search ViGene Biosciences for FAUP1
Inhibitory RNA Products
- Search ViGene Biosciences for FAUP1
Flow Cytometry Products
Expression for FAUP1 Gene
NURSA nuclear receptor signaling pathways regulating expression of FAUP1 Gene:
FAUP1Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAUP1 Gene
Orthologs for FAUP1 Gene
No data available for Orthologs for FAUP1 Gene
Paralogs for FAUP1 Gene
No data available for Paralogs for FAUP1 Gene
Variants for FAUP1 Gene
Relevant External Links for FAUP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- FAUP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAUP1 Gene
Disorders for FAUP1 Gene
Relevant External Links for FAUP1
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- FAUP1
No disorders were found for FAUP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAUP1 Gene
Publications for FAUP1 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
- Characterization of a processed pseudogene of human FAU1 on chromosome 18. (PMID: 7642109) Kas K. … Merregaert J. (Gene 1995) 2 3 64
Products for FAUP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAUP1
- Origene Custom Protein Services for FAUP1
- Browse OriGene Inhibitory RNA Products For FAUP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for FAUP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For FAUP1
- GenScript: Custom all cDNA clones Services for FAUP1
- GenScript Custom Purified and Recombinant Proteins Services for FAUP1
- GenScript Custom Assay Services for FAUP1
- GenScript Custom overexpressing Cell Line Services for FAUP1
- Browse GenScript CRISPR for FAUP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for FAUP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Search ViGene Biosciences for FAUP1
- Cyagen custom Knockout/knockin (KOKI) mouse models for FAUP1
- VectorBuilder custom plasmid, inducible vectors for FAUP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for FAUP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for FAUP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer