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FAT1P1 Gene(Pseudogene)

FAT Atypical Cadherin 1 Pseudogene 1

GCID:
GC20M010888
GIFtS:
15
Genes Participants
UDN Logo

Aliases for FAT1P1 Gene

Aliases for FAT1P1 Gene

  • FAT Atypical Cadherin 1 Pseudogene 1 2 3 5
  • FAT Tumor Suppressor Homolog 1 (Drosophila) Pseudogene 1 2
  • FAT Tumor Suppressor (Drosophila) Homolog Pseudogene 1 2
  • FAT Tumor Suppressor Homolog 1 Pseudogene 1 3
  • FAT Tumor Suppressor Homolog Pseudogene 1 3
  • DJ697P8.1 3

External Ids for FAT1P1 Gene

Previous GeneCards Identifiers for FAT1P1 Gene

  • GC20U990198
  • GC20M010817
  • GC20M010864
  • GC20M010820
  • GC20M010870

Summaries for FAT1P1 Gene

GeneCards Summary for FAT1P1 Gene

FAT1P1 (FAT Atypical Cadherin 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAT1P1 Gene

Genomics for FAT1P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for FAT1P1 Gene

Enhancers for FAT1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G010902 0.2 ENCODE 0.4 -14.0 -14021 1.6 LOC101929413 FAT1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAT1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAT1P1 Gene

Chromosome:
20
Start:
10,888,568 bp from pter
End:
10,889,090 bp from pter
Size:
523 bases
Orientation:
Minus strand

Genomic View for FAT1P1 Gene

Genes around FAT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAT1P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAT1P1 Gene

Proteins for FAT1P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for FAT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAT1P1 Gene

Domains & Families for FAT1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAT1P1 Gene

Function for FAT1P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Phenotypes for FAT1P1 Gene

GenomeRNAi human phenotypes for FAT1P1:
genes like me logo Genes that share phenotypes with FAT1P1: view

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAT1P1 Gene

Localization for FAT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAT1P1 Gene

Pathways & Interactions for FAT1P1 Gene

SuperPathways for FAT1P1 Gene

PathCards logo More details on SuperPathways for FAT1P1
No Data Available

Interacting Proteins for FAT1P1 Gene

Gene Ontology (GO) - Biological Process for FAT1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAT1P1 Gene

Drugs & Compounds for FAT1P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAT1P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for FAT1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAT1P1 Gene

No ASD Table

Relevant External Links for FAT1P1 Gene

GeneLoc Exon Structure for
FAT1P1
ECgene alternative splicing isoforms for
FAT1P1

Expression for FAT1P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAT1P1 Gene

mRNA expression in normal human tissues for FAT1P1 Gene
mRNA expression by GTEx for FAT1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of FAT1P1 Gene:

FAT1P1
genes like me logo Genes that share expression patterns with FAT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAT1P1 Gene

Orthologs for FAT1P1 Gene

Evolution for FAT1P1 Gene

ENSEMBL:
Gene Tree for FAT1P1 (if available)
TreeFam:
Gene Tree for FAT1P1 (if available)

No data available for Orthologs for FAT1P1 Gene

Paralogs for FAT1P1 Gene

No data available for Paralogs for FAT1P1 Gene

Variants for FAT1P1 Gene

Relevant External Links for FAT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAT1P1 Gene

Disorders for FAT1P1 Gene

Relevant External Links for FAT1P1

Genetic Association Database (GAD)
FAT1P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAT1P1

No disorders were found for FAT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAT1P1 Gene

Publications for FAT1P1 Gene

  1. Hypertrophy-associated polymorphisms ascertained in a founder cohort applied to heart failure risk and mortality. (PMID: 21348951) Parsa A. … Liggett S.B. (Clin Transl Sci 2011) 46 64
  2. Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure. (PMID: 21909110) Wain L.V. … van Duijn C.M. (Nat. Genet. 2011) 46 64
  3. Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk. (PMID: 21909115) . … Johnson T. (Nature 2011) 46 64
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64

Products for FAT1P1 Gene

Sources for FAT1P1 Gene

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