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Aliases & Descriptions for FASLG
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases APT1LG1 2 , 3 APTL 3 CD178 1 , 2 CD95L 2 FASL 2 , 3 FasL 1 OTTHUMP00000032708 2 TNFSF6 2 , 3
Descriptions Apoptosis antigen ligand 3 CD178 antigen 3 CD95 ligand 2 CD95L protein 3 Fas antigen ligand 3 Fas ligand 2 , 3 Fas ligand (TNF superfamily, member 6) 2 apoptosis (APO-1) antigen ligand 1 2 tumor necrosis factor (ligand) superfamily, member 6 1 , 2
Search outside databases for aliases for FASLG genePrevious GC identifer: GC01P169360
Summaries for FASLG (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for FASLG : The protein encoded by this gene is the ligand for FAS. Both are transmembrane proteins.Interaction of FAS with this ligand is critical in triggering apoptosis of some types of cellssuch as lymphocytes. Defects in this gene may be related to some cases of systemic lupuserythematosus (SLE). [provided by RefSeq] UniProtKB/Swiss-Prot: TNFL6_HUMAN, P48023 Function : Cytokine that binds to TNFRSF6/FAS, a receptor that transduces the apoptotic signal intocells. May be involved in cytotoxic T-cell mediated apoptosis and in T-cell development.TNFRSF6/FAS-mediated apoptosis may have a role in the induction of peripheral tolerance, in theantigen-stimulated suicide of mature T-cells, or both. Binding to the decoy receptor TNFRSF6B/DcR3modulates its effects
Gene Wiki entry for FASLG (Fas_ligand)
Genomic Location for FASLG
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the FASLG gene Entrez Gene cytogenetic band: 1q23 Ensembl cytogenetic band: 1q24.3 HGNC cytogenetic band: 1q23 FASLG Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01P170894:
(about GC identifiers )
Start:
170,894,777 bp from pter
End:
170,902,637 bp from pter
Size:
7,861 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000001.9 NT_004487.18 Proteins for FASLG
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: TNFL6_HUMAN, P48023 (See
protein sequence )Recommended Name: Tumor necrosis factor ligand superfamily member 6 Size : 281 amino acids; 31485 Da
Subunit : Homotrimer (Probable)
Subcellular location : Cell membrane; Single-pass type II membrane protein. Secreted. Note=May bereleased into the extracellular fluid, probably by cleavage form the cell surface
PDB structures from and Proteopedia : 1BZI (3D)
 
Secondary accessions : Q9BZP9Alternative splicing : 2 isoforms : P48023-1 P48023-2
Post-translational modifications:
N-glycosylated1
The soluble form derives from the membrane form by proteolytic processing1
REFSEQ proteins: NP_000630.1 ENSEMBL proteins: ENSP00000356694 ENSP00000344739 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for FASLG: Assays for FASLG:
Protein
Domains/ Families for FASLG(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P48023 ProtoNet protein and cluster: P48023
3 Blocks protein families : IPB006052 Tumor Necrosis Factor IPB006053 Tumour necrosis factor family signature IPB008064 Fas antigen ligand signature UniProtKB/Swiss-Prot: TNFL6_HUMAN, P48023 Similarity : Belongs to the tumor necrosis factor family
Gene Function for FASLG
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000639 Applied Biosystems Silencer ® siRNAs for FASLG Sigma-Aldrich siRNA and siRNA Panels for FASLG Sigma-Aldrich shRNA Panels and shRNA for FASLG Explore Sigma-Aldrich super-pooled esiRNAs               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000639                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000639                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_000639  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000639 UniProtKB/Swiss-Prot: TNFL6_HUMAN, P48023 Function : Cytokine that binds to TNFRSF6/FAS, a receptor that transduces the apoptotic signal intocells. May be involved in cytotoxic T-cell mediated apoptosis and in T-cell development.TNFRSF6/FAS-mediated apoptosis may have a role in the induction of peripheral tolerance, in theantigen-stimulated suicide of mature T-cells, or both. Binding to the decoy receptor TNFRSF6B/DcR3modulates its effects
15/17 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Fasl) (see all 17
):2 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005125 cytokine activity
IEA -- GO:0005164 tumor necrosis factor receptor binding
IEA --
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Pathways & Interactions for FASLG
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/15 Sigma-Aldrich "Your Favorite Gene" Pathways for FASLG (Your Favorite Gene powered by Ingenuity) (see all 15
) Gene Network CentralTM Interacting Genes and Proteins Network for FASLG 5/174 Interacting proteins for FASLG (P48023 2 ENSP00000356694 3 ) via UniProtKB, MINT, and/or STRING (see all 174
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
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Drugs & Compounds for FASLG (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for FASLG 10/51 Novoseek chemical compound relationships for FASLG gene (see all 51
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
dutp
59.55
5
12393527 (1), 12957613 (1), 17536279 (1), 14746617 (1) (see all 5 )
ionomycin
50.85
35
9823934 (4), 10754388 (3), 10570264 (2), 8566027 (2) (see all 18 )
antalarmin
43.45
2
14644813 (1), 15032629 (1)
sp 600125
40.25
3
17459422 (1), 18941206 (1), 17397922 (1)
oleandrin
38.33
2
17173971 (1), 17203245 (1)
ceramide
37.23
16
9321399 (4), 10745271 (3), 18613813 (2), 16927017 (1) (see all 8 )
c-d4t
35.23
3
17180098 (1), 16212887 (1)
atpo
33.22
5
17558708 (3), 17357290 (2)
(glc)4
28.68
2
10656451 (1)
3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide
25.04
2
18471799 (1), 19305072 (1)
About this table
Transcripts for FASLG(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000639 Sigma-Aldrich siRNA and siRNA Panels for FASLG Sigma-Aldrich shRNA Panels and shRNA for FASLG Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_000639
REFSEQ mRNAs for FASLG gene: NM_000639.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000639
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000639                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000639                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_000639  
Additional cDNA sequence: AF288573.1 AK314874.1 AY225406.1 AY858799.1 BC017502.1 D38122.1 U08137.1 U11821.1 X89102.1
1 DOTS entry : DT.309278
14 AceView cDNA sequences :X89102 U08137 BC017502 NM_000639 AY225406 D38122 U11821 BG744522 AF288573 BX283930 BP377614 BG745161 AA361832 BI824995
highest scoring ESTs for FASLG :D38122 U11821 AA361832 AF288573 AY225406 BC017502 BG744522 BG745161 U08137 X89102
Unigene Cluster for FASLG: Fas ligand (TNF superfamily, member 6) Hs.2007 [show with all ESTs ] Unigene Representative Sequence: NM_000639 GeneLoc Exon Structure 2 Ensembl transcripts including schematic representations : ENST00000367721
ENST00000340030
Expression for FASLG
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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FASLG expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for FASLG 1 / 2 / 3
6 probe-sets matching FASLG gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAATAAAAAGSOURCE GeneReport for Unigene cluster: Hs.2007
Orthologs for FASLG
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for FASLG gene from 5/7 species (see all 7
)
About this table Species with no ortholog for FASLG ENSEMBL Gene Tree for FASLG Paralogs for FASLG (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for FASLG gene TNFSF15 2 ENSG00000204496 2 TNF 2 TNFSF14 2
SNPs/Variants for FASLG (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for FASLG (up to first 250kb)
Disorders & Mutations for FASLG
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 134638 UniProtKB/Swiss-Prot: TNFL6_HUMAN, P48023
Defects in FASLG are the cause of autoimmune lymphoproliferative syndrome type 1B (ALPS1B)[MIM:601859]; also known as Canale-Smith syndrome (CSS). ALPS is a childhood syndrome involvinghemolytic anemia and thrombocytopenia with massive lymphadenopathy and splenomegaly
10/94 Novoseek disease relationships for FASLG gene (see all 94
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
autoimmune lymphoproliferative syndrome
72.72
5
10672498 (1), 19176318 (1), 8787672 (1), 17062728 (1)
necrosis
71.49
242
8996241 (2), 11422744 (2), 18314443 (2), 11384965 (2) (see all 99 )
tumors
70.43
911
15585624 (8), 14515265 (7), 14766381 (6), 12949796 (6) (see all 99 )
tumor escape
68.04
8
15968727 (1), 10586378 (1), 10652626 (1), 11523216 (1) (see all 8 )
leukemia lymphocytic large granular
62.66
2
10652626 (1), 10492090 (1)
toxic epidermal necrolysis
60.73
2
11799383 (1), 17977827 (1)
hashimotos thyroiditis
56.52
27
12559631 (4), 9396343 (3), 16219172 (2), 17558708 (2) (see all 16 )
autoimmune diseases
53.79
22
7533498 (2), 10548879 (1), 14555216 (1), 18361934 (1) (see all 18 )
cancer
49.60
153
12854132 (5), 11927015 (4), 14680559 (4), 10817504 (3) (see all 93 )
stevens-johnson syndrome
49.51
1
11799383 (1)
About this table GeneTests: FASLG Autoimmune Lymphoproliferative Syndrome Human Gene Mutation Database : FASLG Genetic Association Database: FASLG Human Genome Epidemiology Navigator: FASLG (62 documents)
Medical News for FASLG (Possibly Related Articles in
Doctor's Guide )
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--
Publications for FASLG (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1605 PubMed articles for FASLG gene (see all 1605
): Fas ligand mutation in a patient with systemic lupus erythematosus and lymphoproliferative disease. (PubMed id 8787672) 1, 3, 4, 6 Wu J.... Mountz J.D. (1996) Human Fas ligand: gene structure, chromosomal location and species specificity. (PubMed id 7826947) 1, 2, 3, 4 Takahashi T.... Nagata S. (1994) Genetic polymorphisms of Fas (CD95) and Fas ligand (CD178) influence the rise in CD4+ T cell count after antiretroviral therapy in drug-naive HIV-positive patients. (PubMed id 16158329) 1, 3, 6 Nasi M....Cossarizza A. (2005) Fas ligand gene polymorphisms are not associated with Hashimoto's thyroiditis and Graves' disease. (PubMed id 12559631) 1, 3, 6 Stuck B.J....Badenhoop K. (2003) The -844C/T polymorphism in the Fas ligand promoter associates with Taiwanese SLE. (PubMed id 15674374) 1, 3, 6 Chen J.Y....Luo S.F. (2005) Fas and Fas ligand gene polymorphisms in primary Sjogren's syndrome. (PubMed id 11036836) 1, 3, 6 Bolstad A.I....Jonsson R. (2000) Characterization of Fas (Apo-1, CD95)-Fas ligand interaction. (PubMed id 9228058) 1, 3, 4 Schneider P.... Tschopp J. (1997) The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414) 3, 4 Gregory S.G.... Bentley D.R. (2006) Functional polymorphisms in cell death pathway genes FAS and FASL contribute to risk of lung cancer. (PubMed id 15937082) 3, 6 Zhang X....Lin D. (2005) Polymorphisms in the promoter regions of FAS and FASL genes as candidate genetic factors conferring susceptibility to endometriosis. (PubMed id 15806311) 3, 6 Fernandez R.M....Antinolo G. (2005)
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Genome Databases showing FASLG
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing FASLG
(According to HUGE )
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Specialized Databases showing FASLG (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for FASLG (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for FASLG:
Antibodies & Assays for FASLG   (FasL)
Search Tocris compounds for FASLG
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Summaries for FASLG
Technologies for FASLG
Transcripts for FASLG
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009