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Aliases for FAS-AS1 Gene

Subcategory (RNA class) for FAS-AS1 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for FAS-AS1 Gene

  • FAS Antisense RNA 1 2 3
  • FAS Antisense RNA 1 (Non-Protein Coding) 2 3
  • FAS Antisense RNA (Non-Protein Coding) 2 3
  • FAS-AS 3
  • FASAS 3
  • SAF 3

External Ids for FAS-AS1 Gene

ORGUL Members for FAS-AS1 Gene

Previous HGNC Symbols for FAS-AS1 Gene

  • FASAS
  • FAS-AS

Previous GeneCards Identifiers for FAS-AS1 Gene

  • GC10M090751

Summaries for FAS-AS1 Gene

GeneCards Summary for FAS-AS1 Gene

FAS-AS1 (FAS Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class. Diseases associated with FAS-AS1 include Dientamoebiasis and Thyroid Sarcoma.

Gene Wiki entry for FAS-AS1 Gene

Additional gene information for FAS-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAS-AS1 Gene

Genomics for FAS-AS1 Gene

Regulatory Elements for FAS-AS1 Gene

Enhancers for FAS-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H088988 1.6 Ensembl ENCODE dbSUPER 0.7 -0.3 -268 8 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF207 ZNF143 DEK FAS ACTA2 ENSG00000240996 ACTA2-AS1 CH25H FAS-AS1 GC10M088853
GH10H088999 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.1 -8100 3 PKNOX1 IKZF1 ZNF341 EED CEBPB ZNF24 RUNX3 NR2F2 FAS CH25H ACTA2-AS1 GC10M088853 FAS-AS1
GH10H088997 0.6 ENCODE dbSUPER 0.4 -5.0 -5038 0 ATF2 FAS ENSG00000261438 GC10M088853 FAS-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAS-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FAS-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000031278 1275 3401 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF207 ZNF143 DEK

Genomic Location for FAS-AS1 Gene

Chromosome:
10
Start:
88,991,422 bp from pter
End:
88,992,975 bp from pter
Size:
1,554 bases
Orientation:
Minus strand

Genomic View for FAS-AS1 Gene

Genes around FAS-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAS-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAS-AS1 Gene

Proteins for FAS-AS1 Gene

Post-translational modifications for FAS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAS-AS1 Gene

Domains & Families for FAS-AS1 Gene

Gene Families for FAS-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAS-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAS-AS1 Gene

Function for FAS-AS1 Gene

Phenotypes From GWAS Catalog for FAS-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FAS-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAS-AS1 Gene

Localization for FAS-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for FAS-AS1 gene
Compartment Confidence
extracellular 1
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAS-AS1 Gene

Pathways & Interactions for FAS-AS1 Gene

SuperPathways for FAS-AS1 Gene

No Data Available

Interacting Proteins for FAS-AS1 Gene

Gene Ontology (GO) - Biological Process for FAS-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAS-AS1 Gene

Drugs & Compounds for FAS-AS1 Gene

No Compound Related Data Available

Transcripts for FAS-AS1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for FAS-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for FAS-AS1 Gene

No ASD Table

Relevant External Links for FAS-AS1 Gene

GeneLoc Exon Structure for
FAS-AS1
ECgene alternative splicing isoforms for
FAS-AS1

No data available for mRNA/cDNA for FAS-AS1 Gene

Expression for FAS-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAS-AS1 Gene

Orthologs for FAS-AS1 Gene

No data available for Orthologs and Evolution for FAS-AS1 Gene

Paralogs for FAS-AS1 Gene

No data available for Paralogs for FAS-AS1 Gene

Variants for FAS-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAS-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1002471347 -- 88,993,865(+) AATAC(A/G)ATAAA intron-variant, upstream-variant-2KB
rs1002767883 -- 88,994,713(+) TACAC(A/C)AACCT intron-variant, upstream-variant-2KB
rs1003208768 -- 88,994,397(+) ACTAA(A/G)GACTA intron-variant, upstream-variant-2KB
rs1004176305 -- 88,993,236(+) ACAAA(A/T)TTCTA intron-variant, upstream-variant-2KB
rs1004302978 -- 88,994,014(+) ATCCT(C/T)TAATG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAS-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3624139 CNV gain 21293372
esv3624143 CNV loss 21293372
esv3624144 CNV gain 21293372
nsv831943 CNV gain 17160897

Relevant External Links for FAS-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAS-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAS-AS1 Gene

Disorders for FAS-AS1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for FAS-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
dientamoebiasis
  • intestinal trichomoniasis
thyroid sarcoma
  • sarcoma of the thyroid gland
corneal abscess
adult fibrosarcoma
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for FAS-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAS-AS1
genes like me logo Genes that share disorders with FAS-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for FAS-AS1 Gene

Publications for FAS-AS1 Gene

  1. Data in support of transcriptional regulation and function of Fas-antisense long noncoding RNA during human erythropoiesis. (PMID: 27141526) Villamizar O … Wilber A (Data in brief 2016) 2 3 60
  2. FAS-antisense 1 lncRNA and production of soluble versus membrane Fas in B-cell lymphoma. (PMID: 24811343) Sehgal L … Samaniego F (Leukemia 2014) 2 3 60
  3. Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas. (PMID: 15829500) Yan MD … Chuang SE (Human molecular genetics 2005) 2 3 60
  4. Fas-antisense long noncoding RNA is differentially expressed during maturation of human erythrocytes and confers resistance to Fas-mediated cell death. (PMID: 27067490) Villamizar O … Wilber A (Blood cells, molecules & diseases 2016) 3 60
  5. Expression Analysis of Long Non-coding RNAs in the Blood of Multiple Sclerosis Patients. (PMID: 28967047) Eftekharian MM … Taheri M (Journal of molecular neuroscience : MN 2017) 3

Products for FAS-AS1 Gene

Sources for FAS-AS1 Gene

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