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Aliases for FAM99B Gene

Subcategory (RNA class) for FAM99B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM99B Gene

  • Family With Sequence Similarity 99 Member B (Non-Protein Coding) 2 3 5
  • Family With Sequence Similarity 99, Member B (Non-Protein Coding) 2
  • Family With Sequence Similarity 99, Member B 2

External Ids for FAM99B Gene

Previous GeneCards Identifiers for FAM99B Gene

  • GC00U921691
  • GC11U900702
  • GC11M001662
  • GC11M001704
  • GC11M001496

Summaries for FAM99B Gene

GeneCards Summary for FAM99B Gene

FAM99B (Family With Sequence Similarity 99 Member B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM99B Gene

Genomics for FAM99B Gene

Regulatory Elements for FAM99B Gene

Genomic Location for FAM99B Gene

Chromosome:
11
Start:
1,683,269 bp from pter
End:
1,685,629 bp from pter
Size:
2,361 bases
Orientation:
Minus strand

Genomic View for FAM99B Gene

Genes around FAM99B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM99B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM99B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM99B Gene

Proteins for FAM99B Gene

Post-translational modifications for FAM99B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM99B Gene

Domains & Families for FAM99B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM99B Gene

Function for FAM99B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM99B Gene

Localization for FAM99B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM99B Gene

Pathways & Interactions for FAM99B Gene

SuperPathways for FAM99B Gene

No Data Available

Interacting Proteins for FAM99B Gene

Gene Ontology (GO) - Biological Process for FAM99B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM99B Gene

Drugs & Compounds for FAM99B Gene

No Compound Related Data Available

Transcripts for FAM99B Gene

mRNA/cDNA for FAM99B Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM99B Gene

Family with sequence similarity 99, member B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM99B Gene

No ASD Table

Relevant External Links for FAM99B Gene

GeneLoc Exon Structure for
FAM99B
ECgene alternative splicing isoforms for
FAM99B

Expression for FAM99B Gene

mRNA expression in normal human tissues for FAM99B Gene

mRNA differential expression in normal tissues according to GTEx for FAM99B Gene

This gene is overexpressed in Liver (x49.5).

SOURCE GeneReport for Unigene cluster for FAM99B Gene Hs.117797

genes like me logo Genes that share expression patterns with FAM99B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM99B Gene

Orthologs for FAM99B Gene

Evolution for FAM99B Gene

ENSEMBL:
Gene Tree for FAM99B (if available)
TreeFam:
Gene Tree for FAM99B (if available)

No data available for Orthologs for FAM99B Gene

Paralogs for FAM99B Gene

No data available for Paralogs for FAM99B Gene

Variants for FAM99B Gene

Sequence variations from dbSNP and Humsavar for FAM99B Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs582485 -- 1,683,478(-) CACAC(A/C)GGGTG nc-transcript-variant
rs582529 -- 1,683,440(-) TCCGG(C/T)ACTGG nc-transcript-variant
rs1715358 -- 1,685,002(-) CCCTG(C/T)CCTCC intron-variant
rs1715359 -- 1,684,996(-) CCTCC(A/T)GGACC intron-variant
rs11039555 -- 1,684,283(+) GGATG(C/G)CGGGA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM99B Gene

Variant ID Type Subtype PubMed ID
dgv980n71 CNV Loss 21882294
nsv896727 CNV Gain 21882294
nsv896728 CNV Gain 21882294
esv7747 OTHER Inversion 19470904
nsv435977 OTHER Inversion 17901297
nsv832049 CNV Loss 17160897
nsv896729 CNV Loss 21882294
nsv896730 CNV Loss 21882294
esv2743958 CNV Deletion 23290073
esv1323796 CNV Deletion 17803354
esv2743959 CNV Deletion 23290073

Relevant External Links for FAM99B Gene

HapMap Linkage Disequilibrium report
FAM99B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM99B Gene

Disorders for FAM99B Gene

Relevant External Links for FAM99B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM99B

No disorders were found for FAM99B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM99B Gene

Publications for FAM99B Gene

No publications were found for FAM99B Gene.

Products for FAM99B Gene

Sources for FAM99B Gene

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