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Aliases for FAM99A Gene

Subcategory (RNA class) for FAM99A Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for FAM99A Gene

  • Family With Sequence Similarity 99 Member A (Non-Protein Coding) 2 3 5
  • Family With Sequence Similarity 99, Member A (Non-Protein Coding) 2
  • Family With Sequence Similarity 99, Member A 2

External Ids for FAM99A Gene

Previous GeneCards Identifiers for FAM99A Gene

  • GC11P001642
  • GC11P001468

Summaries for FAM99A Gene

GeneCards Summary for FAM99A Gene

FAM99A (Family With Sequence Similarity 99 Member A (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM99A Gene

Genomics for FAM99A Gene

Regulatory Elements for FAM99A Gene

Genomic Location for FAM99A Gene

Chromosome:
11
Start:
1,665,597 bp from pter
End:
1,667,856 bp from pter
Size:
2,260 bases
Orientation:
Plus strand

Genomic View for FAM99A Gene

Genes around FAM99A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM99A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM99A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM99A Gene

Proteins for FAM99A Gene

Post-translational modifications for FAM99A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM99A Gene

Domains & Families for FAM99A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM99A Gene

Function for FAM99A Gene

Phenotypes for FAM99A Gene

GenomeRNAi human phenotypes for FAM99A:
genes like me logo Genes that share phenotypes with FAM99A: view

miRNA for FAM99A Gene

miRTarBase miRNAs that target FAM99A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM99A Gene

Localization for FAM99A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM99A Gene

Pathways & Interactions for FAM99A Gene

SuperPathways for FAM99A Gene

No Data Available

Interacting Proteins for FAM99A Gene

Gene Ontology (GO) - Biological Process for FAM99A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM99A Gene

Drugs & Compounds for FAM99A Gene

No Compound Related Data Available

Transcripts for FAM99A Gene

mRNA/cDNA for FAM99A Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM99A Gene

Family with sequence similarity 99, member A (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM99A Gene

No ASD Table

Relevant External Links for FAM99A Gene

GeneLoc Exon Structure for
FAM99A
ECgene alternative splicing isoforms for
FAM99A

Expression for FAM99A Gene

mRNA expression in normal human tissues for FAM99A Gene

mRNA differential expression in normal tissues according to GTEx for FAM99A Gene

This gene is overexpressed in Liver (x52.6).

SOURCE GeneReport for Unigene cluster for FAM99A Gene Hs.567908

genes like me logo Genes that share expression patterns with FAM99A: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM99A Gene

Orthologs for FAM99A Gene

Evolution for FAM99A Gene

ENSEMBL:
Gene Tree for FAM99A (if available)
TreeFam:
Gene Tree for FAM99A (if available)

No data available for Orthologs for FAM99A Gene

Paralogs for FAM99A Gene

No data available for Paralogs for FAM99A Gene

Variants for FAM99A Gene

Sequence variations from dbSNP and Humsavar for FAM99A Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs476573 -- 1,667,279(-) AGAGC(C/G/T)GGGCC nc-transcript-variant
rs4752753 -- 1,664,964(-) CCATC(A/G)CTCCG upstream-variant-2KB
rs7131362 -- 1,668,095(+) AGCAC(A/G)CAGGC downstream-variant-500B
rs9737245 -- 1,666,277(+) CCTGG(A/G)CCCCC intron-variant
rs10838585 -- 1,664,846(+) ATTCA(A/G)GACAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM99A Gene

Variant ID Type Subtype PubMed ID
dgv979n71 CNV Loss 21882294
dgv980n71 CNV Loss 21882294
nsv896726 CNV Loss 21882294
nsv896727 CNV Gain 21882294
nsv896728 CNV Gain 21882294
esv7747 OTHER Inversion 19470904

Relevant External Links for FAM99A Gene

HapMap Linkage Disequilibrium report
FAM99A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM99A Gene

Disorders for FAM99A Gene

Relevant External Links for FAM99A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM99A

No disorders were found for FAM99A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM99A Gene

Publications for FAM99A Gene

No publications were found for FAM99A Gene.

Products for FAM99A Gene

Sources for FAM99A Gene

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