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Aliases for FAM99A Gene

Subcategory (RNA class) for FAM99A Gene

antisense

Quality Score for this RNA gene is

13

Aliases for FAM99A Gene

  • Family With Sequence Similarity 99, Member A (Non-Protein Coding) 2 3
  • Family With Sequence Similarity 99, Member A 2

External Ids for FAM99A Gene

ORGUL Members for FAM99A Gene

Summaries for FAM99A Gene

GeneCards Summary for FAM99A Gene

FAM99A (Family With Sequence Similarity 99, Member A (Non-Protein Coding)) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM99A Gene

Genomics for FAM99A Gene

Genomic Location for FAM99A Gene

Start:
1,665,597 bp from pter
End:
1,667,856 bp from pter
Size:
2,260 bases
Orientation:
Plus strand

Genomic View for FAM99A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM99A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM99A Gene

Regulatory Elements for FAM99A Gene

Proteins for FAM99A Gene

Post-translational modifications for FAM99A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM99A Gene

Domains for FAM99A Gene

Gene Families for FAM99A Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with FAM99A: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for FAM99A Gene

Function for FAM99A Gene

Phenotypes for FAM99A Gene

GenomeRNAi human phenotypes for FAM99A:
genes like me logo Genes that share phenotypes with FAM99A: view

miRNA for FAM99A Gene

miRTarBase miRNAs that target FAM99A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM99A Gene

Localization for FAM99A Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM99A Gene

Pathways for FAM99A Gene

SuperPathways for FAM99A Gene

No Data Available

Interacting Proteins for FAM99A Gene

Gene Ontology (GO) - Biological Process for FAM99A Gene

None

No data available for Pathways by source for FAM99A Gene

Transcripts for FAM99A Gene

mRNA/cDNA for FAM99A Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM99A Gene

Family with sequence similarity 99, member A (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM99A Gene

No ASD Table

Relevant External Links for FAM99A Gene

GeneLoc Exon Structure for
FAM99A
ECgene alternative splicing isoforms for
FAM99A

Expression for FAM99A Gene

mRNA expression in normal human tissues for FAM99A Gene

mRNA differential expression in normal tissues according to GTEx for FAM99A Gene

This gene is overexpressed in Liver (52.6).

SOURCE GeneReport for Unigene cluster for FAM99A Gene Hs.567908

genes like me logo Genes that share expressions with FAM99A: view

Orthologs for FAM99A Gene

Evolution for FAM99A Gene

ENSEMBL:
Gene Tree for FAM99A (if available)
TreeFam:
Gene Tree for FAM99A (if available)

No data available for Orthologs for FAM99A Gene

Paralogs for FAM99A Gene

No data available for Paralogs for FAM99A Gene

Variants for FAM99A Gene

Sequence variations from dbSNP and Humsavar for FAM99A Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs476573 -- 1,667,279(-) AGAGC(C/G/T)GGGCC nc-transcript-variant
rs3887507 -- 1,665,894(+) ATCCT(A/G)GAGGA intron-variant
rs3887508 -- 1,665,791(+) CTCTG(A/C)ATCTC intron-variant
rs4752752 -- 1,665,372(-) ACTCA(C/T)TGCAG upstream-variant-2KB
rs5001280 -- 1,665,577(-) TCCTC(C/T)GGCAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM99A Gene

Variant ID Type Subtype PubMed ID
dgv979n71 CNV Loss 21882294
dgv980n71 CNV Loss 21882294
nsv896726 CNV Loss 21882294
nsv896727 CNV Gain 21882294
nsv896728 CNV Gain 21882294
esv7747 OTHER Inversion 19470904

Relevant External Links for FAM99A Gene

HapMap Linkage Disequilibrium report
FAM99A

Disorders for FAM99A Gene

No disorders were found for FAM99A Gene.

No data available for UniProtKB/Swiss-Prot for FAM99A Gene

Publications for FAM99A Gene

No publications were found for FAM99A Gene.

Products for FAM99A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM99A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM99A
    • Block miRNA regulation of FAM99A using miScript Target Protectors

    Sources for FAM99A Gene

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