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Aliases for FAM95C Gene

Subcategory (RNA class) for FAM95C Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM95C Gene

  • Family With Sequence Similarity 95 Member C 2 3 5
  • Family With Sequence Similarity 95, Member C 2

External Ids for FAM95C Gene

Previous GeneCards Identifiers for FAM95C Gene

  • GC09M038599
  • GC09M038614
  • GC09M038631
  • GC09M038650
  • GC09M038647
  • GC09M038671

Summaries for FAM95C Gene

GeneCards Summary for FAM95C Gene

FAM95C (Family With Sequence Similarity 95 Member C) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM95C Gene

Genomics for FAM95C Gene

Regulatory Elements for FAM95C Gene

Enhancers for FAM95C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F038671 1.3 Ensembl ENCODE 11.8 -127.0 -127043 1.8 HDGF ARID4B SIN3A FEZF1 ZNF2 ZNF48 ETS1 GLIS2 ZNF143 KLF7 FAM95C GC09P038672 YWHABP1
GH09F038680 1.5 FANTOM5 Ensembl ENCODE 4.5 -136.5 -136523 3.3 PKNOX1 INSM2 KLF17 SIN3A FEZF1 ZEB1 ZNF366 FOS ZNF362 USF2 CNTNAP3 FAM95C RNU6-765P ENSG00000283329
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM95C on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM95C Gene

Chromosome:
9
Start:
38,540,567 bp from pter
End:
38,545,372 bp from pter
Size:
4,806 bases
Orientation:
Minus strand

Genomic View for FAM95C Gene

Genes around FAM95C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM95C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM95C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM95C Gene

Proteins for FAM95C Gene

Post-translational modifications for FAM95C Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM95C Gene

Domains & Families for FAM95C Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM95C Gene

Function for FAM95C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM95C Gene

Localization for FAM95C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM95C Gene

Pathways & Interactions for FAM95C Gene

SuperPathways for FAM95C Gene

No Data Available

Interacting Proteins for FAM95C Gene

Gene Ontology (GO) - Biological Process for FAM95C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM95C Gene

Transcripts for FAM95C Gene

mRNA/cDNA for FAM95C Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM95C Gene

No ASD Table

Relevant External Links for FAM95C Gene

GeneLoc Exon Structure for
FAM95C
ECgene alternative splicing isoforms for
FAM95C

Expression for FAM95C Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM95C Gene:

FAM95C
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM95C Gene

Orthologs for FAM95C Gene

Evolution for FAM95C Gene

ENSEMBL:
Gene Tree for FAM95C (if available)
TreeFam:
Gene Tree for FAM95C (if available)

No data available for Orthologs for FAM95C Gene

Paralogs for FAM95C Gene

No data available for Paralogs for FAM95C Gene

Variants for FAM95C Gene

Sequence variations from dbSNP and Humsavar for FAM95C Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10118941 -- 38,543,095(+) ATCCA(A/G)CCTCA nc-transcript-variant
rs10122630 -- 38,540,451(+) gagaA(A/G)TGGAG downstream-variant-500B
rs1058025 -- 38,540,592(-) ttgct(A/G)gtaat nc-transcript-variant
rs10586754 -- 38,540,545(+) ACACA(-/CACACA)GAGAG downstream-variant-500B
rs10814711 -- 38,547,155(+) GTACA(A/T)TCCAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM95C Gene

Variant ID Type Subtype PubMed ID
dgv261e55 CNV loss 17911159
esv3620429 CNV loss 21293372
nsv1020605 CNV gain 25217958
nsv1028978 CNV loss 25217958
nsv1034122 CNV gain 25217958
nsv1125318 OTHER inversion 24896259
nsv428211 CNV loss 18775914
nsv8445 CNV gain+loss 18304495
nsv982218 CNV duplication 23825009

Relevant External Links for FAM95C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM95C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM95C Gene

Disorders for FAM95C Gene

Relevant External Links for FAM95C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM95C

No disorders were found for FAM95C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM95C Gene

Publications for FAM95C Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FAM95C Gene

Sources for FAM95C Gene

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