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Aliases for FAM92A1P2 Gene

Subcategory (RNA class) for FAM92A1P2 Gene

lncRNA

Aliases for FAM92A1P2 Gene

  • Family With Sequence Similarity 92 Member A1 Pseudogene 2 2 5
  • Family With Sequence Similarity 92, Member A3 2 3
  • Family With Sequence Similarity 92, Member A1 Pseudogene 2 2
  • FAM92A3 3

External Ids for FAM92A1P2 Gene

ORGUL Members for FAM92A1P2 Gene

Previous HGNC Symbols for FAM92A1P2 Gene

  • FAM92A3

Previous GeneCards Identifiers for FAM92A1P2 Gene

  • GC04P183960

Summaries for FAM92A1P2 Gene

GeneCards Summary for FAM92A1P2 Gene

FAM92A1P2 (Family With Sequence Similarity 92 Member A1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM92A1P2 Gene

Genomics for FAM92A1P2 Gene

Regulatory Elements for FAM92A1P2 Gene

Enhancers for FAM92A1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G183073 1 Ensembl ENCODE 0.3 +36.8 36807 1.9 ELF3 CTCF TEAD4 MAX CEBPG ZNF2 ZIC2 RAD21 TEAD3 ZNF143 WWC2-AS2 WWC2 LOC105377578 FAM92A1P2
GH04G183064 0.9 ENCODE 0.3 +27.1 27060 0.6 ELF3 FOXA2 ZNF48 RAD21 MIXL1 SP5 MIER2 KAT8 MEF2D RFX3 WWC2 FAM92A1P2 LOC105377578
GH04G183030 0.4 ENCODE 0.4 -6.7 -6663 0.2 ARID1B IKZF1 LOC100132090 FAM92A1P2
GH04G183063 0.4 ENCODE 0.3 +26.4 26416 0.3 TSC22D4 MGA WWC2 FAM92A1P2 LOC105377578
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM92A1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM92A1P2 Gene

Chromosome:
4
Start:
183,037,665 bp from pter
End:
183,040,119 bp from pter
Size:
2,455 bases
Orientation:
Plus strand

Genomic View for FAM92A1P2 Gene

Genes around FAM92A1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM92A1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM92A1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM92A1P2 Gene

Proteins for FAM92A1P2 Gene

Post-translational modifications for FAM92A1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM92A1P2 Gene

Domains & Families for FAM92A1P2 Gene

Suggested Antigen Peptide Sequences for FAM92A1P2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM92A1P2 Gene

Function for FAM92A1P2 Gene

Phenotypes for FAM92A1P2 Gene

GenomeRNAi human phenotypes for FAM92A1P2:
genes like me logo Genes that share phenotypes with FAM92A1P2: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM92A1P2 Gene

Localization for FAM92A1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM92A1P2 Gene

Pathways & Interactions for FAM92A1P2 Gene

SuperPathways for FAM92A1P2 Gene

No Data Available

Interacting Proteins for FAM92A1P2 Gene

Gene Ontology (GO) - Biological Process for FAM92A1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM92A1P2 Gene

Drugs & Compounds for FAM92A1P2 Gene

No Compound Related Data Available

Transcripts for FAM92A1P2 Gene

mRNA/cDNA for FAM92A1P2 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM92A1P2 Gene

Family with sequence similarity 92, member A3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM92A1P2 Gene

No ASD Table

Relevant External Links for FAM92A1P2 Gene

GeneLoc Exon Structure for
FAM92A1P2
ECgene alternative splicing isoforms for
FAM92A1P2

Expression for FAM92A1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM92A1P2 Gene

mRNA differential expression in normal tissues according to GTEx for FAM92A1P2 Gene

This gene is overexpressed in Testis (x52.7).

NURSA nuclear receptor signaling pathways regulating expression of FAM92A1P2 Gene:

FAM92A1P2

SOURCE GeneReport for Unigene cluster for FAM92A1P2 Gene:

Hs.652187
genes like me logo Genes that share expression patterns with FAM92A1P2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM92A1P2 Gene

Orthologs for FAM92A1P2 Gene

Evolution for FAM92A1P2 Gene

ENSEMBL:
Gene Tree for FAM92A1P2 (if available)
TreeFam:
Gene Tree for FAM92A1P2 (if available)

No data available for Orthologs for FAM92A1P2 Gene

Paralogs for FAM92A1P2 Gene

No data available for Paralogs for FAM92A1P2 Gene

Variants for FAM92A1P2 Gene

Sequence variations from dbSNP and Humsavar for FAM92A1P2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000135556 -- 183,037,591(+) CTCCA(A/T)CCCCA nc-transcript-variant, upstream-variant-2KB
rs1000245577 -- 183,036,254(+) GCGGG(A/G)TGAGA intron-variant, upstream-variant-2KB
rs1000904474 -- 183,036,128(+) AATTC(C/T)TCTGA intron-variant, upstream-variant-2KB
rs1001275594 -- 183,037,689(+) GGCTC(A/G)CACCC nc-transcript-variant, upstream-variant-2KB
rs1001403129 -- 183,036,334(+) GGACA(C/T)CTGCA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM92A1P2 Gene

Variant ID Type Subtype PubMed ID
nsv1016376 CNV gain 25217958

Relevant External Links for FAM92A1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM92A1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM92A1P2 Gene

Disorders for FAM92A1P2 Gene

Relevant External Links for FAM92A1P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM92A1P2

No disorders were found for FAM92A1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM92A1P2 Gene

Publications for FAM92A1P2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64

Products for FAM92A1P2 Gene

Sources for FAM92A1P2 Gene

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