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FAM90A9P Gene(Pseudogene)

Family With Sequence Similarity 90 Member A9, Pseudogene

GCID:
GC08P007759
GIFtS:
20
Genes Participants
UDN Logo

Aliases for FAM90A9P Gene

Aliases for FAM90A9P Gene

  • Family With Sequence Similarity 90 Member A9, Pseudogene 2 5
  • FAM90A9 3 4
  • Family With Sequence Similarity 90, Member A9, Pseudogene 2
  • Family With Sequence Similarity 90, Member A9 2
  • Putative Protein FAM90A9 3

External Ids for FAM90A9P Gene

Previous HGNC Symbols for FAM90A9P Gene

  • FAM90A9

Previous GeneCards Identifiers for FAM90A9P Gene

  • GC08P007621

Summaries for FAM90A9P Gene

Entrez Gene Summary for FAM90A9P Gene

  • FAM90A9 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, Oct 2009]

GeneCards Summary for FAM90A9P Gene

FAM90A9P (Family With Sequence Similarity 90 Member A9, Pseudogene) is a Pseudogene. GO annotations related to this gene include nucleic acid binding.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A9P Gene

Genomics for FAM90A9P Gene

Products:

  1. Regulatory Element

Genomic Location for FAM90A9P Gene

Chromosome:
8
Start:
7,759,668 bp from pter
End:
7,764,902 bp from pter
Size:
5,235 bases
Orientation:
Plus strand

Genomic View for FAM90A9P Gene

Genes around FAM90A9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM90A9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM90A9P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAM90A9P Gene

No data available for Regulatory Elements for FAM90A9P Gene

Proteins for FAM90A9P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for FAM90A9P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NNJ1-F90A9_HUMAN
    Recommended name:
    Putative protein FAM90A9P
    Protein Accession:
    A6NNJ1

    Protein attributes for FAM90A9P Gene

    Size:
    464 amino acids
    Molecular mass:
    49738 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM90A9P Gene

Protein Expression for FAM90A9P Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for FAM90A9P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM90A9P Gene

Domains & Families for FAM90A9P Gene

Protein Domains for FAM90A9P Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM90A9P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NNJ1

UniProtKB/Swiss-Prot:

F90A9_HUMAN :
  • Belongs to the FAM90 family.
Family:
  • Belongs to the FAM90 family.
genes like me logo Genes that share domains with FAM90A9P: view

No data available for Gene Families for FAM90A9P Gene

Function for FAM90A9P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Phenotypes for FAM90A9P Gene

GenomeRNAi human phenotypes for FAM90A9P:
genes like me logo Genes that share phenotypes with FAM90A9P: view

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM90A9P Gene

Localization for FAM90A9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM90A9P Gene

Pathways & Interactions for FAM90A9P Gene

SuperPathways for FAM90A9P Gene

PathCards logo More details on SuperPathways for FAM90A9P
No Data Available

Interacting Proteins for FAM90A9P Gene

Gene Ontology (GO) - Biological Process for FAM90A9P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM90A9P Gene

Drugs & Compounds for FAM90A9P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAM90A9P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for FAM90A9P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A9P Gene

No ASD Table

Relevant External Links for FAM90A9P Gene

GeneLoc Exon Structure for
FAM90A9P
ECgene alternative splicing isoforms for
FAM90A9P

Expression for FAM90A9P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM90A9P Gene

mRNA expression in normal human tissues for FAM90A9P Gene
mRNA expression by GTEx for FAM90A9P Gene

Protein differential expression in normal tissues from HIPED for FAM90A9P Gene

This gene is overexpressed in Heart (68.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM90A9P Gene



Protein tissue co-expression partners for FAM90A9P Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM90A9P Gene:

FAM90A9P
genes like me logo Genes that share expression patterns with FAM90A9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM90A9P Gene

Orthologs for FAM90A9P Gene

Evolution for FAM90A9P Gene

ENSEMBL:
Gene Tree for FAM90A9P (if available)
TreeFam:
Gene Tree for FAM90A9P (if available)

No data available for Orthologs for FAM90A9P Gene

Paralogs for FAM90A9P Gene

(20) SIMAP similar genes for FAM90A9P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM90A9P: view

No data available for Paralogs for FAM90A9P Gene

Variants for FAM90A9P Gene

Relevant External Links for FAM90A9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM90A9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM90A9P Gene

Disorders for FAM90A9P Gene

No disorders were found for FAM90A9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM90A9P Gene

Publications for FAM90A9P Gene

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3 64
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3 64
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64

Products for FAM90A9P Gene

Sources for FAM90A9P Gene

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