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Aliases for FAM90A7P Gene

Aliases for FAM90A7P Gene

  • Family With Sequence Similarity 90 Member A7, Pseudogene 2 5
  • FAM90A7 3 4
  • Family With Sequence Similarity 90, Member A7, Pseudogene 2
  • Family With Sequence Similarity 90, Member A7 2
  • Putative Protein FAM90A7 3

External Ids for FAM90A7P Gene

Previous HGNC Symbols for FAM90A7P Gene

  • FAM90A7

Previous GeneCards Identifiers for FAM90A7P Gene

  • GC08M007413

Summaries for FAM90A7P Gene

Entrez Gene Summary for FAM90A7P Gene

  • FAM90A7 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, Oct 2009]

GeneCards Summary for FAM90A7P Gene

FAM90A7P (Family With Sequence Similarity 90 Member A7, Pseudogene) is a Pseudogene. GO annotations related to this gene include nucleic acid binding.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A7P Gene

Genomics for FAM90A7P Gene

Genomic Location for FAM90A7P Gene

Chromosome:
8
Start:
7,556,138 bp from pter
End:
7,559,712 bp from pter
Size:
3,575 bases
Orientation:
Minus strand

Genomic View for FAM90A7P Gene

Genes around FAM90A7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM90A7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM90A7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM90A7P Gene

No data available for Regulatory Elements for FAM90A7P Gene

Proteins for FAM90A7P Gene

  • Protein details for FAM90A7P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NKC0-F90A7_HUMAN
    Recommended name:
    Putative protein FAM90A7P
    Protein Accession:
    A6NKC0

    Protein attributes for FAM90A7P Gene

    Size:
    464 amino acids
    Molecular mass:
    49804 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM90A7P Gene

Post-translational modifications for FAM90A7P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM90A7P Gene

Domains & Families for FAM90A7P Gene

Protein Domains for FAM90A7P Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM90A7P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NKC0

UniProtKB/Swiss-Prot:

F90A7_HUMAN :
  • Belongs to the FAM90 family.
Family:
  • Belongs to the FAM90 family.
genes like me logo Genes that share domains with FAM90A7P: view

No data available for Gene Families for FAM90A7P Gene

Function for FAM90A7P Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM90A7P Gene

Localization for FAM90A7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM90A7P Gene

Pathways & Interactions for FAM90A7P Gene

SuperPathways for FAM90A7P Gene

No Data Available

Interacting Proteins for FAM90A7P Gene

Gene Ontology (GO) - Biological Process for FAM90A7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM90A7P Gene

Transcripts for FAM90A7P Gene

mRNA/cDNA for FAM90A7P Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A7P Gene

No ASD Table

Relevant External Links for FAM90A7P Gene

GeneLoc Exon Structure for
FAM90A7P
ECgene alternative splicing isoforms for
FAM90A7P

Expression for FAM90A7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAM90A7P Gene

Protein differential expression in normal tissues from HIPED for FAM90A7P Gene

This gene is overexpressed in Heart (68.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM90A7P Gene



Protein tissue co-expression partners for FAM90A7P Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM90A7P Gene:

FAM90A7P

SOURCE GeneReport for Unigene cluster for FAM90A7P Gene:

Hs.715411
genes like me logo Genes that share expression patterns with FAM90A7P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM90A7P Gene

Orthologs for FAM90A7P Gene

Evolution for FAM90A7P Gene

ENSEMBL:
Gene Tree for FAM90A7P (if available)
TreeFam:
Gene Tree for FAM90A7P (if available)

No data available for Orthologs for FAM90A7P Gene

Paralogs for FAM90A7P Gene

genes like me logo Genes that share paralogs with FAM90A7P: view

No data available for Paralogs for FAM90A7P Gene

Variants for FAM90A7P Gene

Sequence variations from dbSNP and Humsavar for FAM90A7P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs752607389 -- 7,559,544(+) CCCGT(C/T)CCCCA upstream-variant-2KB
rs765858452 -- 7,558,139(+) AGCCA(A/C)AGGAA intron-variant
rs80244000 -- 7,559,619(+) GGGAG(A/C)CCTTG upstream-variant-2KB
rs879039142 -- 7,558,965(+) CTTCC(A/G)TGGTT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM90A7P Gene

Variant ID Type Subtype PubMed ID
nsv967557 CNV duplication 23825009
nsv951092 CNV deletion 24416366
nsv8281 CNV gain+loss 18304495
nsv821656 CNV gain 15273396
nsv820769 CNV deletion 20802225
nsv610093 CNV loss 21841781
nsv515968 CNV gain+loss 19592680
nsv510977 OTHER complex 20534489
nsv508496 CNV deletion 20534489
nsv471650 CNV gain+loss 15918152
nsv471457 CNV gain 19718026
nsv442397 CNV gain 18776908
nsv428194 CNV gain+loss 18775914
nsv1145180 CNV deletion 24896259
nsv1140256 OTHER inversion 24896259
nsv1133684 CNV deletion 24896259
nsv1124997 CNV duplication 24896259
nsv1075521 CNV deletion 25765185
nsv1075102 CNV deletion 25765185
nsv1031948 CNV gain+loss 25217958
nsv1031577 CNV gain 25217958
nsv1030537 CNV loss 25217958
nsv1027543 CNV gain 25217958
nsv1026778 CNV gain 25217958
esv996398 CNV gain 20482838
esv3891321 CNV gain+loss 25118596
esv3891318 CNV gain 25118596
esv3616114 CNV loss 21293372
esv3584574 CNV gain 24956385
esv3410467 CNV duplication 20981092
esv33606 CNV gain+loss 17666407
esv3347673 CNV duplication 20981092
esv2764098 CNV gain+loss 21179565
esv2761169 CNV gain+loss 21179565
esv2759589 CNV gain+loss 17122850
esv2752266 CNV loss 17911159
esv2752265 CNV gain 17911159
esv21583 CNV gain+loss 19812545
dgv6955n100 CNV gain 25217958
dgv6950n100 CNV loss 25217958
dgv6949n100 CNV gain 25217958
dgv6948n100 CNV gain+loss 25217958
dgv6946n100 CNV gain 25217958
dgv6943n100 CNV gain 25217958
dgv6940n100 CNV loss 25217958
dgv6937n100 CNV loss 25217958
dgv6936n100 CNV gain+loss 25217958
dgv6935n100 CNV gain 25217958
dgv6934n100 CNV gain+loss 25217958
dgv6927n100 CNV gain+loss 25217958
dgv6926n100 CNV loss 25217958
dgv6925n100 CNV gain 25217958
dgv6915n100 CNV gain 25217958
dgv6912n100 CNV loss 25217958
dgv6911n100 CNV loss 25217958
dgv6910n100 CNV gain+loss 25217958
dgv6909n100 CNV gain 25217958
dgv6908n100 CNV gain 25217958
dgv6896n100 CNV gain+loss 25217958
dgv6895n100 CNV loss 25217958
dgv6890n100 CNV gain 25217958
dgv6887n100 CNV loss 25217958
dgv6885n100 CNV gain 25217958
dgv6882n100 CNV gain 25217958
dgv4050e59 CNV duplication 20981092
dgv4049e59 CNV duplication 20981092
dgv3761n106 CNV deletion 24896259
dgv2035e212 CNV gain 25503493
dgv11927n54 CNV loss 21841781
dgv11925n54 CNV loss 21841781
dgv11917n54 CNV gain 21841781
dgv11916n54 CNV loss 21841781
dgv11914n54 CNV gain 21841781
dgv11913n54 CNV gain 21841781
dgv11912n54 CNV loss 21841781
dgv11911n54 CNV loss 21841781

Relevant External Links for FAM90A7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM90A7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM90A7P Gene

Disorders for FAM90A7P Gene

Relevant External Links for FAM90A7P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM90A7P

No disorders were found for FAM90A7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM90A7P Gene

Publications for FAM90A7P Gene

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3 64
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3 64
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4 64

Products for FAM90A7P Gene

Sources for FAM90A7P Gene

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